RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
CGRRF1-209ENST00000557755 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
CGRRF1-209ENST00000557755 ARHGEF12Q9NZN5 1544 aa19.37■□□□□ 0.69
CGRRF1-209ENST00000557755 NUP153P49790 1475 aaKnown RBP19.34■□□□□ 0.69
CGRRF1-209ENST00000557755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.31■□□□□ 0.68
CGRRF1-209ENST00000557755 PTPRTO14522 1441 aa19.31■□□□□ 0.68
CGRRF1-209ENST00000557755 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
CGRRF1-209ENST00000557755 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
CGRRF1-209ENST00000557755 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
CGRRF1-209ENST00000557755 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
CGRRF1-209ENST00000557755 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
CGRRF1-209ENST00000557755 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
CGRRF1-209ENST00000557755 ATP10AO60312 1499 aa19.27■□□□□ 0.67
CGRRF1-209ENST00000557755 SAMD9Q5K651 1589 aa19.27■□□□□ 0.67
CGRRF1-209ENST00000557755 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
CGRRF1-209ENST00000557755 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
CGRRF1-209ENST00000557755 PLEKHD1A6NEE1 506 aa19.24■□□□□ 0.67
CGRRF1-209ENST00000557755 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
CGRRF1-209ENST00000557755 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
CGRRF1-209ENST00000557755 RANGAP1P46060 587 aaPredicted RBP19.22■□□□□ 0.67
CGRRF1-209ENST00000557755 C3P01024 1663 aa19.21■□□□□ 0.67
CGRRF1-209ENST00000557755 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
CGRRF1-209ENST00000557755 NCOA1Q15788 1441 aa19.18■□□□□ 0.66
CGRRF1-209ENST00000557755 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
CGRRF1-209ENST00000557755 PLCH2O75038 1416 aa19.13■□□□□ 0.65
CGRRF1-209ENST00000557755 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
CGRRF1-209ENST00000557755 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
CGRRF1-209ENST00000557755 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
CGRRF1-209ENST00000557755 HSPA1LP34931 641 aa19.11■□□□□ 0.65
CGRRF1-209ENST00000557755 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
CGRRF1-209ENST00000557755 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
CGRRF1-209ENST00000557755 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
CGRRF1-209ENST00000557755 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
CGRRF1-209ENST00000557755 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
CGRRF1-209ENST00000557755 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
CGRRF1-209ENST00000557755 KDM5CP41229 1560 aa19.05■□□□□ 0.64
CGRRF1-209ENST00000557755 MYO5CQ9NQX4 1742 aa19.05■□□□□ 0.64
CGRRF1-209ENST00000557755 PIP4K2BP78356 416 aa19.04■□□□□ 0.64
CGRRF1-209ENST00000557755 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
CGRRF1-209ENST00000557755 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
CGRRF1-209ENST00000557755 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
CGRRF1-209ENST00000557755 KIF14Q15058 1648 aa19■□□□□ 0.63
CGRRF1-209ENST00000557755 REREQ9P2R6 1566 aa18.99■□□□□ 0.63
CGRRF1-209ENST00000557755 AGLP35573 1532 aa18.96■□□□□ 0.63
CGRRF1-209ENST00000557755 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
CGRRF1-209ENST00000557755 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
CGRRF1-209ENST00000557755 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
CGRRF1-209ENST00000557755 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
CGRRF1-209ENST00000557755 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
CGRRF1-209ENST00000557755 NPATQ14207 1427 aa18.91■□□□□ 0.62
CGRRF1-209ENST00000557755 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
CGRRF1-209ENST00000557755 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
CGRRF1-209ENST00000557755 MYO3AQ8NEV4 1616 aa18.91■□□□□ 0.62
CGRRF1-209ENST00000557755 ZMYM3Q14202 1370 aa18.91■□□□□ 0.62
CGRRF1-209ENST00000557755 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
CGRRF1-209ENST00000557755 KIDINS220Q9ULH0 1771 aa18.9■□□□□ 0.62
CGRRF1-209ENST00000557755 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
CGRRF1-209ENST00000557755 PKD2Q13563 968 aa18.89■□□□□ 0.61
CGRRF1-209ENST00000557755 PLA2R1Q13018 1463 aa18.89■□□□□ 0.61
CGRRF1-209ENST00000557755 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
CGRRF1-209ENST00000557755 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
CGRRF1-209ENST00000557755 CEP170BQ9Y4F5 1589 aaPredicted RBP18.88■□□□□ 0.61
CGRRF1-209ENST00000557755 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
CGRRF1-209ENST00000557755 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
CGRRF1-209ENST00000557755 TOM1O60784 492 aa18.86■□□□□ 0.61
CGRRF1-209ENST00000557755 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
CGRRF1-209ENST00000557755 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
CGRRF1-209ENST00000557755 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
CGRRF1-209ENST00000557755 ABCC1P33527 1531 aa18.84■□□□□ 0.61
CGRRF1-209ENST00000557755 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
CGRRF1-209ENST00000557755 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
CGRRF1-209ENST00000557755 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
CGRRF1-209ENST00000557755 SHANK2Q9UPX8 1470 aa18.78■□□□□ 0.6
CGRRF1-209ENST00000557755 NEURL4Q96JN8 1562 aa18.78■□□□□ 0.6
CGRRF1-209ENST00000557755 CPS1P31327 1500 aa18.78■□□□□ 0.6
CGRRF1-209ENST00000557755 PREX2Q70Z35 1606 aa18.77■□□□□ 0.6
CGRRF1-209ENST00000557755 DNMT1P26358 1616 aaKnown RBP18.76■□□□□ 0.59
CGRRF1-209ENST00000557755 CDK11AQ9UQ88 783 aaPredicted RBP18.76■□□□□ 0.59
CGRRF1-209ENST00000557755 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
CGRRF1-209ENST00000557755 MSH5O43196 834 aa18.75■□□□□ 0.59
CGRRF1-209ENST00000557755 SAMD9LQ8IVG5 1584 aa18.75■□□□□ 0.59
CGRRF1-209ENST00000557755 VWDEQ8N2E2 1590 aa18.73■□□□□ 0.59
CGRRF1-209ENST00000557755 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
CGRRF1-209ENST00000557755 CLIP1P30622 1438 aa18.73■□□□□ 0.59
CGRRF1-209ENST00000557755 A2ML1A8K2U0 1454 aa18.72■□□□□ 0.59
CGRRF1-209ENST00000557755 GGT6Q6P531 493 aa18.72■□□□□ 0.59
CGRRF1-209ENST00000557755 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
CGRRF1-209ENST00000557755 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
CGRRF1-209ENST00000557755 ADRA2BP18089 450 aa18.69■□□□□ 0.58
CGRRF1-209ENST00000557755 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
CGRRF1-209ENST00000557755 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
CGRRF1-209ENST00000557755 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
CGRRF1-209ENST00000557755 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
CGRRF1-209ENST00000557755 SYCP2Q9BX26 1530 aa18.68■□□□□ 0.58
CGRRF1-209ENST00000557755 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
CGRRF1-209ENST00000557755 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
CGRRF1-209ENST00000557755 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
CGRRF1-209ENST00000557755 HNRNPMP52272 730 aaKnown RBP eCLIP18.66■□□□□ 0.58
CGRRF1-209ENST00000557755 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
CGRRF1-209ENST00000557755 SETD1AO15047 1707 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms