RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.47
SPTLC2-206ENST00000557566 ARAP3Q8WWN8 1544 aa12.08□□□□□ -0.48
SPTLC2-206ENST00000557566 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
SPTLC2-206ENST00000557566 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
SPTLC2-206ENST00000557566 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
SPTLC2-206ENST00000557566 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
SPTLC2-206ENST00000557566 KIAA0556O60303 1618 aa12.05□□□□□ -0.48
SPTLC2-206ENST00000557566 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-206ENST00000557566 KCNH8Q96L42 1107 aa12.04□□□□□ -0.48
SPTLC2-206ENST00000557566 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
SPTLC2-206ENST00000557566 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-206ENST00000557566 HSPA2P54652 639 aa12.02□□□□□ -0.49
SPTLC2-206ENST00000557566 HAX1O00165 279 aa12.01□□□□□ -0.49
SPTLC2-206ENST00000557566 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-206ENST00000557566 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
SPTLC2-206ENST00000557566 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
SPTLC2-206ENST00000557566 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
SPTLC2-206ENST00000557566 ABCA8O94911 1581 aa11.96□□□□□ -0.5
SPTLC2-206ENST00000557566 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
SPTLC2-206ENST00000557566 FKBP8Q14318 412 aa11.95□□□□□ -0.5
SPTLC2-206ENST00000557566 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
SPTLC2-206ENST00000557566 FRMPD1Q5SYB0 1578 aa11.93□□□□□ -0.5
SPTLC2-206ENST00000557566 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
SPTLC2-206ENST00000557566 NEO1Q92859 1461 aa11.93□□□□□ -0.5
SPTLC2-206ENST00000557566 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
SPTLC2-206ENST00000557566 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
SPTLC2-206ENST00000557566 RAPGEF2Q9Y4G8 1499 aa11.91□□□□□ -0.5
SPTLC2-206ENST00000557566 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
SPTLC2-206ENST00000557566 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
SPTLC2-206ENST00000557566 FANCAO15360 1455 aa11.89□□□□□ -0.51
SPTLC2-206ENST00000557566 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPTLC2-206ENST00000557566 PREX1Q8TCU6 1659 aa11.89□□□□□ -0.51
SPTLC2-206ENST00000557566 FER1L4A9Z1Z3 1794 aa11.89□□□□□ -0.51
SPTLC2-206ENST00000557566 YEATS2Q9ULM3 1422 aa11.87□□□□□ -0.51
SPTLC2-206ENST00000557566 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
SPTLC2-206ENST00000557566 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
SPTLC2-206ENST00000557566 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
SPTLC2-206ENST00000557566 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
SPTLC2-206ENST00000557566 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
SPTLC2-206ENST00000557566 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
SPTLC2-206ENST00000557566 ATP10BO94823 1461 aa11.83□□□□□ -0.52
SPTLC2-206ENST00000557566 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
SPTLC2-206ENST00000557566 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
SPTLC2-206ENST00000557566 ARID3CA6NKF2 412 aa11.82□□□□□ -0.52
SPTLC2-206ENST00000557566 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
SPTLC2-206ENST00000557566 ZFYVE16Q7Z3T8 1539 aa11.81□□□□□ -0.52
SPTLC2-206ENST00000557566 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
SPTLC2-206ENST00000557566 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
SPTLC2-206ENST00000557566 ZMYM4Q5VZL5 1548 aa11.81□□□□□ -0.52
SPTLC2-206ENST00000557566 CFAP74Q9C0B2 1584 aa11.8□□□□□ -0.52
SPTLC2-206ENST00000557566 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-206ENST00000557566 EVX2Q03828 476 aa11.79□□□□□ -0.52
SPTLC2-206ENST00000557566 MLECQ14165 292 aa11.79□□□□□ -0.52
SPTLC2-206ENST00000557566 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
SPTLC2-206ENST00000557566 PTPRTO14522 1441 aa11.78□□□□□ -0.52
SPTLC2-206ENST00000557566 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
SPTLC2-206ENST00000557566 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
SPTLC2-206ENST00000557566 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
SPTLC2-206ENST00000557566 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
SPTLC2-206ENST00000557566 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.52
SPTLC2-206ENST00000557566 MAGI2Q86UL8 1455 aa11.77□□□□□ -0.52
SPTLC2-206ENST00000557566 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
SPTLC2-206ENST00000557566 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
SPTLC2-206ENST00000557566 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-206ENST00000557566 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
SPTLC2-206ENST00000557566 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
SPTLC2-206ENST00000557566 ATP10AO60312 1499 aa11.7□□□□□ -0.54
SPTLC2-206ENST00000557566 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
SPTLC2-206ENST00000557566 MED1Q15648 1581 aaPredicted RBP11.68□□□□□ -0.54
SPTLC2-206ENST00000557566 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
SPTLC2-206ENST00000557566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTLC2-206ENST00000557566 NUP153P49790 1475 aaKnown RBP11.67□□□□□ -0.54
SPTLC2-206ENST00000557566 C3P01024 1663 aa11.67□□□□□ -0.54
SPTLC2-206ENST00000557566 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
SPTLC2-206ENST00000557566 NCOA1Q15788 1441 aa11.66□□□□□ -0.54
SPTLC2-206ENST00000557566 SAMD9Q5K651 1589 aa11.66□□□□□ -0.54
SPTLC2-206ENST00000557566 SCAPERQ9BY12 1400 aa11.65□□□□□ -0.54
SPTLC2-206ENST00000557566 PROM2Q8N271 834 aa11.64□□□□□ -0.55
SPTLC2-206ENST00000557566 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
SPTLC2-206ENST00000557566 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
SPTLC2-206ENST00000557566 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
SPTLC2-206ENST00000557566 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
SPTLC2-206ENST00000557566 CAMSAP1Q5T5Y3 1602 aa11.61□□□□□ -0.55
SPTLC2-206ENST00000557566 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
SPTLC2-206ENST00000557566 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
SPTLC2-206ENST00000557566 PLCH2O75038 1416 aa11.59□□□□□ -0.55
SPTLC2-206ENST00000557566 REREQ9P2R6 1566 aa11.58□□□□□ -0.55
SPTLC2-206ENST00000557566 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
SPTLC2-206ENST00000557566 HSPA1LP34931 641 aa11.58□□□□□ -0.56
SPTLC2-206ENST00000557566 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
SPTLC2-206ENST00000557566 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
SPTLC2-206ENST00000557566 DIP2CQ9Y2E4 1556 aa11.57□□□□□ -0.56
SPTLC2-206ENST00000557566 AGLP35573 1532 aa11.56□□□□□ -0.56
SPTLC2-206ENST00000557566 KDM5CP41229 1560 aa11.56□□□□□ -0.56
SPTLC2-206ENST00000557566 SUPT6HQ7KZ85 1726 aaKnown RBP11.56□□□□□ -0.56
SPTLC2-206ENST00000557566 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
SPTLC2-206ENST00000557566 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
SPTLC2-206ENST00000557566 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
SPTLC2-206ENST00000557566 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
SPTLC2-206ENST00000557566 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms