RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
TGFB3-207ENST00000557493 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
TGFB3-207ENST00000557493 POGZQ7Z3K3 1410 aa16.37■□□□□ 0.21
TGFB3-207ENST00000557493 ARHGEF40Q8TER5 1519 aa16.37■□□□□ 0.21
TGFB3-207ENST00000557493 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
TGFB3-207ENST00000557493 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
TGFB3-207ENST00000557493 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
TGFB3-207ENST00000557493 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
TGFB3-207ENST00000557493 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
TGFB3-207ENST00000557493 AKNAQ7Z591 1439 aa16.33■□□□□ 0.2
TGFB3-207ENST00000557493 FANCAO15360 1455 aa16.33■□□□□ 0.2
TGFB3-207ENST00000557493 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.2
TGFB3-207ENST00000557493 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
TGFB3-207ENST00000557493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
TGFB3-207ENST00000557493 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
TGFB3-207ENST00000557493 KANK4Q5T7N3 995 aaPredicted RBP16.31■□□□□ 0.2
TGFB3-207ENST00000557493 MTUS2Q5JR59 1369 aa16.3■□□□□ 0.2
TGFB3-207ENST00000557493 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
TGFB3-207ENST00000557493 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
TGFB3-207ENST00000557493 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
TGFB3-207ENST00000557493 MLECQ14165 292 aa16.26■□□□□ 0.19
TGFB3-207ENST00000557493 ZFYVE16Q7Z3T8 1539 aa16.25■□□□□ 0.19
TGFB3-207ENST00000557493 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
TGFB3-207ENST00000557493 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
TGFB3-207ENST00000557493 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
TGFB3-207ENST00000557493 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
TGFB3-207ENST00000557493 MAGI2Q86UL8 1455 aa16.23■□□□□ 0.19
TGFB3-207ENST00000557493 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
TGFB3-207ENST00000557493 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
TGFB3-207ENST00000557493 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
TGFB3-207ENST00000557493 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
TGFB3-207ENST00000557493 CFAP74Q9C0B2 1584 aa16.21■□□□□ 0.18
TGFB3-207ENST00000557493 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
TGFB3-207ENST00000557493 PLEKHD1A6NEE1 506 aa16.2■□□□□ 0.18
TGFB3-207ENST00000557493 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
TGFB3-207ENST00000557493 KIF14Q15058 1648 aa16.18■□□□□ 0.18
TGFB3-207ENST00000557493 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
TGFB3-207ENST00000557493 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
TGFB3-207ENST00000557493 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
TGFB3-207ENST00000557493 UHRF1BP1Q6BDS2 1440 aa16.16■□□□□ 0.18
TGFB3-207ENST00000557493 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
TGFB3-207ENST00000557493 CEBPAP49715 358 aaPredicted RBP16.15■□□□□ 0.18
TGFB3-207ENST00000557493 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
TGFB3-207ENST00000557493 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.18
TGFB3-207ENST00000557493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.17
TGFB3-207ENST00000557493 PTPRTO14522 1441 aa16.13■□□□□ 0.17
TGFB3-207ENST00000557493 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
TGFB3-207ENST00000557493 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
TGFB3-207ENST00000557493 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
TGFB3-207ENST00000557493 ATP10AO60312 1499 aa16.12■□□□□ 0.17
TGFB3-207ENST00000557493 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
TGFB3-207ENST00000557493 IQSEC2Q5JU85 1478 aa16.1■□□□□ 0.17
TGFB3-207ENST00000557493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
TGFB3-207ENST00000557493 MIA2Q96PC5 1412 aa16.09■□□□□ 0.17
TGFB3-207ENST00000557493 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.16
TGFB3-207ENST00000557493 LTBP4Q8N2S1 1624 aa16.06■□□□□ 0.16
TGFB3-207ENST00000557493 TCOF1Q13428 1488 aaKnown RBP16.06■□□□□ 0.16
TGFB3-207ENST00000557493 PLCH2O75038 1416 aa16.06■□□□□ 0.16
TGFB3-207ENST00000557493 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
TGFB3-207ENST00000557493 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
TGFB3-207ENST00000557493 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
TGFB3-207ENST00000557493 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
TGFB3-207ENST00000557493 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
TGFB3-207ENST00000557493 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
TGFB3-207ENST00000557493 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
TGFB3-207ENST00000557493 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
TGFB3-207ENST00000557493 ZNF518AQ6AHZ1 1483 aa16■□□□□ 0.15
TGFB3-207ENST00000557493 NCOA1Q15788 1441 aa16■□□□□ 0.15
TGFB3-207ENST00000557493 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
TGFB3-207ENST00000557493 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
TGFB3-207ENST00000557493 MYT1LQ9UL68 1186 aa15.98■□□□□ 0.15
TGFB3-207ENST00000557493 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
TGFB3-207ENST00000557493 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
TGFB3-207ENST00000557493 AFAP1Q8N556 730 aa15.95■□□□□ 0.14
TGFB3-207ENST00000557493 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
TGFB3-207ENST00000557493 REREQ9P2R6 1566 aa15.95■□□□□ 0.14
TGFB3-207ENST00000557493 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
TGFB3-207ENST00000557493 KDM5CP41229 1560 aa15.94■□□□□ 0.14
TGFB3-207ENST00000557493 C3P01024 1663 aa15.93■□□□□ 0.14
TGFB3-207ENST00000557493 ARHGAP5Q13017 1502 aa15.93■□□□□ 0.14
TGFB3-207ENST00000557493 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
TGFB3-207ENST00000557493 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
TGFB3-207ENST00000557493 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
TGFB3-207ENST00000557493 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
TGFB3-207ENST00000557493 AGLP35573 1532 aa15.91■□□□□ 0.14
TGFB3-207ENST00000557493 ITGAEP38570 1179 aa15.91■□□□□ 0.14
TGFB3-207ENST00000557493 SAMD9LQ8IVG5 1584 aa15.9■□□□□ 0.14
TGFB3-207ENST00000557493 PLEKHH2Q8IVE3 1493 aa15.9■□□□□ 0.14
TGFB3-207ENST00000557493 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
TGFB3-207ENST00000557493 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
TGFB3-207ENST00000557493 ARHGEF5Q12774 1597 aa15.89■□□□□ 0.13
TGFB3-207ENST00000557493 DAPK1P53355 1430 aa15.89■□□□□ 0.13
TGFB3-207ENST00000557493 NPATQ14207 1427 aa15.88■□□□□ 0.13
TGFB3-207ENST00000557493 ADGBQ8N7X0 1667 aa15.88■□□□□ 0.13
TGFB3-207ENST00000557493 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
TGFB3-207ENST00000557493 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
TGFB3-207ENST00000557493 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
TGFB3-207ENST00000557493 SHANK2Q9UPX8 1470 aa15.86■□□□□ 0.13
TGFB3-207ENST00000557493 PKD2Q13563 968 aa15.86■□□□□ 0.13
TGFB3-207ENST00000557493 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms