RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.6
PRKCH-224ENST00000557473 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-224ENST00000557473 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
PRKCH-224ENST00000557473 G3V3G9 751 aa11.25□□□□□ -0.61
PRKCH-224ENST00000557473 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
PRKCH-224ENST00000557473 PKD2Q13563 968 aa11.23□□□□□ -0.61
PRKCH-224ENST00000557473 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-224ENST00000557473 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
PRKCH-224ENST00000557473 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
PRKCH-224ENST00000557473 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
PRKCH-224ENST00000557473 WIZO95785 1651 aa11.2□□□□□ -0.62
PRKCH-224ENST00000557473 RGL2O15211 777 aa11.2□□□□□ -0.62
PRKCH-224ENST00000557473 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
PRKCH-224ENST00000557473 ST18O60284 1047 aa11.19□□□□□ -0.62
PRKCH-224ENST00000557473 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
PRKCH-224ENST00000557473 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
PRKCH-224ENST00000557473 WDR62O43379 1518 aa11.18□□□□□ -0.62
PRKCH-224ENST00000557473 STK25O00506 426 aa11.17□□□□□ -0.62
PRKCH-224ENST00000557473 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
PRKCH-224ENST00000557473 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
PRKCH-224ENST00000557473 CFTRP13569 1480 aa11.12□□□□□ -0.63
PRKCH-224ENST00000557473 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
PRKCH-224ENST00000557473 RSF1Q96T23 1441 aaPredicted RBP11.12□□□□□ -0.63
PRKCH-224ENST00000557473 SOX12O15370 315 aa11.12□□□□□ -0.63
PRKCH-224ENST00000557473 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
PRKCH-224ENST00000557473 SNPHO15079 494 aa11.11□□□□□ -0.63
PRKCH-224ENST00000557473 MARVELD3Q96A59 401 aa11.11□□□□□ -0.63
PRKCH-224ENST00000557473 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
PRKCH-224ENST00000557473 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
PRKCH-224ENST00000557473 NLRP6P59044 892 aa11.06□□□□□ -0.64
PRKCH-224ENST00000557473 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
PRKCH-224ENST00000557473 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-224ENST00000557473 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
PRKCH-224ENST00000557473 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
PRKCH-224ENST00000557473 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
PRKCH-224ENST00000557473 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
PRKCH-224ENST00000557473 EMP3P54852 163 aa11□□□□□ -0.65
PRKCH-224ENST00000557473 PRDM2Q13029 1718 aa11□□□□□ -0.65
PRKCH-224ENST00000557473 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
PRKCH-224ENST00000557473 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-224ENST00000557473 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
PRKCH-224ENST00000557473 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
PRKCH-224ENST00000557473 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
PRKCH-224ENST00000557473 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
PRKCH-224ENST00000557473 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
PRKCH-224ENST00000557473 IFT140Q96RY7 1462 aa10.92□□□□□ -0.66
PRKCH-224ENST00000557473 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
PRKCH-224ENST00000557473 PPP1R37O75864 691 aa10.9□□□□□ -0.66
PRKCH-224ENST00000557473 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
PRKCH-224ENST00000557473 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
PRKCH-224ENST00000557473 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
PRKCH-224ENST00000557473 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
PRKCH-224ENST00000557473 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
PRKCH-224ENST00000557473 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
PRKCH-224ENST00000557473 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
PRKCH-224ENST00000557473 ZNF608Q9ULD9 1512 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-224ENST00000557473 DNMBPQ6XZF7 1577 aa10.86□□□□□ -0.67
PRKCH-224ENST00000557473 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
PRKCH-224ENST00000557473 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
PRKCH-224ENST00000557473 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
PRKCH-224ENST00000557473 ERBB3P21860 1342 aa10.83□□□□□ -0.68
PRKCH-224ENST00000557473 TARBP1Q13395 1621 aaKnown RBP10.81□□□□□ -0.68
PRKCH-224ENST00000557473 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
PRKCH-224ENST00000557473 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRKCH-224ENST00000557473 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
PRKCH-224ENST00000557473 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
PRKCH-224ENST00000557473 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
PRKCH-224ENST00000557473 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
PRKCH-224ENST00000557473 ARSIQ5FYB1 569 aa10.8□□□□□ -0.68
PRKCH-224ENST00000557473 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
PRKCH-224ENST00000557473 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
PRKCH-224ENST00000557473 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
PRKCH-224ENST00000557473 KIF3CO14782 793 aa10.78□□□□□ -0.68
PRKCH-224ENST00000557473 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
PRKCH-224ENST00000557473 KRTAP3-3Q9BYR6 98 aa10.76□□□□□ -0.69
PRKCH-224ENST00000557473 KRTAP3-2Q9BYR7 98 aa10.76□□□□□ -0.69
PRKCH-224ENST00000557473 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
PRKCH-224ENST00000557473 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRKCH-224ENST00000557473 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
PRKCH-224ENST00000557473 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
PRKCH-224ENST00000557473 CHD1O14646 1710 aa10.73□□□□□ -0.69
PRKCH-224ENST00000557473 NUDT7P0C024 238 aa10.71□□□□□ -0.69
PRKCH-224ENST00000557473 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
PRKCH-224ENST00000557473 FGD5Q6ZNL6 1462 aa10.7□□□□□ -0.7
PRKCH-224ENST00000557473 SOGA1O94964 1423 aa10.7□□□□□ -0.7
PRKCH-224ENST00000557473 MMRN1Q13201 1228 aa10.69□□□□□ -0.7
PRKCH-224ENST00000557473 CUX1P39880 1505 aa10.68□□□□□ -0.7
PRKCH-224ENST00000557473 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
PRKCH-224ENST00000557473 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
PRKCH-224ENST00000557473 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
PRKCH-224ENST00000557473 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
PRKCH-224ENST00000557473 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
PRKCH-224ENST00000557473 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-224ENST00000557473 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
PRKCH-224ENST00000557473 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
PRKCH-224ENST00000557473 GRIN2BQ13224 1484 aa10.65□□□□□ -0.7
PRKCH-224ENST00000557473 DSG2Q14126 1118 aa10.64□□□□□ -0.71
PRKCH-224ENST00000557473 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
PRKCH-224ENST00000557473 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
PRKCH-224ENST00000557473 CYB5RLQ6IPT4 315 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms