RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 HSPA2P54652 639 aa16.95■□□□□ 0.3
RDH11-210ENST00000557331 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
RDH11-210ENST00000557331 MLECQ14165 292 aa16.94■□□□□ 0.3
RDH11-210ENST00000557331 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
RDH11-210ENST00000557331 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
RDH11-210ENST00000557331 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
RDH11-210ENST00000557331 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
RDH11-210ENST00000557331 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
RDH11-210ENST00000557331 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
RDH11-210ENST00000557331 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
RDH11-210ENST00000557331 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
RDH11-210ENST00000557331 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.3
RDH11-210ENST00000557331 CLIP1P30622 1438 aa16.89■□□□□ 0.29
RDH11-210ENST00000557331 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.29
RDH11-210ENST00000557331 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
RDH11-210ENST00000557331 MYO5CQ9NQX4 1742 aa16.86■□□□□ 0.29
RDH11-210ENST00000557331 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
RDH11-210ENST00000557331 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
RDH11-210ENST00000557331 UHRF1BP1Q6BDS2 1440 aa16.84■□□□□ 0.29
RDH11-210ENST00000557331 KIF14Q15058 1648 aa16.84■□□□□ 0.29
RDH11-210ENST00000557331 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
RDH11-210ENST00000557331 AFAP1Q8N556 730 aa16.83■□□□□ 0.28
RDH11-210ENST00000557331 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
RDH11-210ENST00000557331 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
RDH11-210ENST00000557331 KDM5CP41229 1560 aa16.81■□□□□ 0.28
RDH11-210ENST00000557331 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
RDH11-210ENST00000557331 MLH3Q9UHC1 1453 aa16.81■□□□□ 0.28
RDH11-210ENST00000557331 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
RDH11-210ENST00000557331 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
RDH11-210ENST00000557331 PTPRTO14522 1441 aa16.78■□□□□ 0.28
RDH11-210ENST00000557331 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
RDH11-210ENST00000557331 AGLP35573 1532 aa16.77■□□□□ 0.28
RDH11-210ENST00000557331 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
RDH11-210ENST00000557331 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
RDH11-210ENST00000557331 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
RDH11-210ENST00000557331 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
RDH11-210ENST00000557331 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
RDH11-210ENST00000557331 STRCQ7RTU9 1775 aa16.71■□□□□ 0.27
RDH11-210ENST00000557331 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
RDH11-210ENST00000557331 NPATQ14207 1427 aa16.69■□□□□ 0.26
RDH11-210ENST00000557331 CDC42BPBQ9Y5S2 1711 aa16.68■□□□□ 0.26
RDH11-210ENST00000557331 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
RDH11-210ENST00000557331 ABCC1P33527 1531 aa16.68■□□□□ 0.26
RDH11-210ENST00000557331 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
RDH11-210ENST00000557331 SOCS7O14512 581 aa16.66■□□□□ 0.26
RDH11-210ENST00000557331 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
RDH11-210ENST00000557331 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
RDH11-210ENST00000557331 C3P01024 1663 aa16.65■□□□□ 0.26
RDH11-210ENST00000557331 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
RDH11-210ENST00000557331 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
RDH11-210ENST00000557331 PLEKHH2Q8IVE3 1493 aa16.64■□□□□ 0.25
RDH11-210ENST00000557331 KIAA1107Q9UPP5 1409 aa16.63■□□□□ 0.25
RDH11-210ENST00000557331 PKD2Q13563 968 aa16.63■□□□□ 0.25
RDH11-210ENST00000557331 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
RDH11-210ENST00000557331 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
RDH11-210ENST00000557331 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
RDH11-210ENST00000557331 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
RDH11-210ENST00000557331 KIDINS220Q9ULH0 1771 aa16.61■□□□□ 0.25
RDH11-210ENST00000557331 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
RDH11-210ENST00000557331 MROH2AA6NES4 1674 aa16.61■□□□□ 0.25
RDH11-210ENST00000557331 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
RDH11-210ENST00000557331 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
RDH11-210ENST00000557331 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
RDH11-210ENST00000557331 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
RDH11-210ENST00000557331 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
RDH11-210ENST00000557331 GPATCH8Q9UKJ3 1502 aaKnown RBP16.57■□□□□ 0.24
RDH11-210ENST00000557331 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
RDH11-210ENST00000557331 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
RDH11-210ENST00000557331 CAMSAP1Q5T5Y3 1602 aa16.56■□□□□ 0.24
RDH11-210ENST00000557331 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
RDH11-210ENST00000557331 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
RDH11-210ENST00000557331 A2MP01023 1474 aa16.54■□□□□ 0.24
RDH11-210ENST00000557331 ATP7AQ04656 1500 aa16.53■□□□□ 0.24
RDH11-210ENST00000557331 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
RDH11-210ENST00000557331 GGT6Q6P531 493 aa16.52■□□□□ 0.24
RDH11-210ENST00000557331 SPATA31D1Q6ZQQ2 1576 aa16.51■□□□□ 0.23
RDH11-210ENST00000557331 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
RDH11-210ENST00000557331 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
RDH11-210ENST00000557331 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
RDH11-210ENST00000557331 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
RDH11-210ENST00000557331 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
RDH11-210ENST00000557331 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
RDH11-210ENST00000557331 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
RDH11-210ENST00000557331 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
RDH11-210ENST00000557331 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
RDH11-210ENST00000557331 ZNF142P52746 1687 aaPredicted RBP16.47■□□□□ 0.23
RDH11-210ENST00000557331 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
RDH11-210ENST00000557331 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
RDH11-210ENST00000557331 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
RDH11-210ENST00000557331 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
RDH11-210ENST00000557331 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
RDH11-210ENST00000557331 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
RDH11-210ENST00000557331 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
RDH11-210ENST00000557331 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
RDH11-210ENST00000557331 TOM1O60784 492 aa16.44■□□□□ 0.22
RDH11-210ENST00000557331 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
RDH11-210ENST00000557331 THEMISQ8N1K5 641 aaPredicted RBP16.42■□□□□ 0.22
RDH11-210ENST00000557331 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
RDH11-210ENST00000557331 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
RDH11-210ENST00000557331 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms