RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 HSPA1LP34931 641 aa21.58■■□□□ 1.05
PSEN1-219ENST00000556951 ZFYVE16Q7Z3T8 1539 aa21.58■■□□□ 1.04
PSEN1-219ENST00000556951 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
PSEN1-219ENST00000556951 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
PSEN1-219ENST00000556951 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-219ENST00000556951 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
PSEN1-219ENST00000556951 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
PSEN1-219ENST00000556951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
PSEN1-219ENST00000556951 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
PSEN1-219ENST00000556951 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
PSEN1-219ENST00000556951 NCOA1Q15788 1441 aa21.51■■□□□ 1.03
PSEN1-219ENST00000556951 MAGI2Q86UL8 1455 aa21.51■■□□□ 1.03
PSEN1-219ENST00000556951 ZNF335Q9H4Z2 1342 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-219ENST00000556951 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
PSEN1-219ENST00000556951 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
PSEN1-219ENST00000556951 CFAP74Q9C0B2 1584 aa21.43■■□□□ 1.02
PSEN1-219ENST00000556951 HECW1Q76N89 1606 aa21.43■■□□□ 1.02
PSEN1-219ENST00000556951 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
PSEN1-219ENST00000556951 PIP4K2BP78356 416 aa21.4■■□□□ 1.02
PSEN1-219ENST00000556951 C3P01024 1663 aa21.4■■□□□ 1.02
PSEN1-219ENST00000556951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.39■■□□□ 1.02
PSEN1-219ENST00000556951 ATP10AO60312 1499 aa21.39■■□□□ 1.01
PSEN1-219ENST00000556951 C9orf84Q5VXU9 1444 aa21.37■■□□□ 1.01
PSEN1-219ENST00000556951 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-219ENST00000556951 CAMSAP1Q5T5Y3 1602 aa21.36■■□□□ 1.01
PSEN1-219ENST00000556951 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1.01
PSEN1-219ENST00000556951 TOM1O60784 492 aa21.33■■□□□ 1.01
PSEN1-219ENST00000556951 RGS17Q9UGC6 210 aaPredicted RBP21.33■■□□□ 1.01
PSEN1-219ENST00000556951 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
PSEN1-219ENST00000556951 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
PSEN1-219ENST00000556951 PLCH2O75038 1416 aa21.28■■□□□ 1
PSEN1-219ENST00000556951 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
PSEN1-219ENST00000556951 PKD2Q13563 968 aa21.2■□□□□ 0.98
PSEN1-219ENST00000556951 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
PSEN1-219ENST00000556951 EEA1Q15075 1411 aa21.17■□□□□ 0.98
PSEN1-219ENST00000556951 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
PSEN1-219ENST00000556951 ALKQ9UM73 1620 aa21.16■□□□□ 0.98
PSEN1-219ENST00000556951 TCOF1Q13428 1488 aaKnown RBP21.16■□□□□ 0.98
PSEN1-219ENST00000556951 CPS1P31327 1500 aa21.15■□□□□ 0.98
PSEN1-219ENST00000556951 AFAP1Q8N556 730 aa21.15■□□□□ 0.98
PSEN1-219ENST00000556951 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
PSEN1-219ENST00000556951 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.97
PSEN1-219ENST00000556951 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
PSEN1-219ENST00000556951 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
PSEN1-219ENST00000556951 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
PSEN1-219ENST00000556951 REREQ9P2R6 1566 aa21.12■□□□□ 0.97
PSEN1-219ENST00000556951 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
PSEN1-219ENST00000556951 NPATQ14207 1427 aa21.12■□□□□ 0.97
PSEN1-219ENST00000556951 AGLP35573 1532 aa21.11■□□□□ 0.97
PSEN1-219ENST00000556951 SRCAPQ6ZRS2 3230 aa21.1■□□□□ 0.97
PSEN1-219ENST00000556951 ZNF142P52746 1687 aaPredicted RBP21.1■□□□□ 0.97
PSEN1-219ENST00000556951 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
PSEN1-219ENST00000556951 KDM5CP41229 1560 aa21.07■□□□□ 0.96
PSEN1-219ENST00000556951 DIP2CQ9Y2E4 1556 aa21.07■□□□□ 0.96
PSEN1-219ENST00000556951 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-219ENST00000556951 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
PSEN1-219ENST00000556951 KIF14Q15058 1648 aa21.06■□□□□ 0.96
PSEN1-219ENST00000556951 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
PSEN1-219ENST00000556951 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
PSEN1-219ENST00000556951 SHANK2Q9UPX8 1470 aa21.05■□□□□ 0.96
PSEN1-219ENST00000556951 MROH2AA6NES4 1674 aa21.05■□□□□ 0.96
PSEN1-219ENST00000556951 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-219ENST00000556951 MYO3AQ8NEV4 1616 aa21.03■□□□□ 0.96
PSEN1-219ENST00000556951 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
PSEN1-219ENST00000556951 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.95
PSEN1-219ENST00000556951 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
PSEN1-219ENST00000556951 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
PSEN1-219ENST00000556951 MLH3Q9UHC1 1453 aa21.01■□□□□ 0.95
PSEN1-219ENST00000556951 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
PSEN1-219ENST00000556951 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
PSEN1-219ENST00000556951 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
PSEN1-219ENST00000556951 UPF1Q92900 1129 aaKnown RBP eCLIP20.97■□□□□ 0.95
PSEN1-219ENST00000556951 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
PSEN1-219ENST00000556951 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
PSEN1-219ENST00000556951 CDC42BPBQ9Y5S2 1711 aa20.95■□□□□ 0.94
PSEN1-219ENST00000556951 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PSEN1-219ENST00000556951 POLR1AO95602 1720 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-219ENST00000556951 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
PSEN1-219ENST00000556951 VWDEQ8N2E2 1590 aa20.92■□□□□ 0.94
PSEN1-219ENST00000556951 NEURL4Q96JN8 1562 aa20.91■□□□□ 0.94
PSEN1-219ENST00000556951 CLIP1P30622 1438 aa20.9■□□□□ 0.94
PSEN1-219ENST00000556951 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
PSEN1-219ENST00000556951 ABCC1P33527 1531 aa20.88■□□□□ 0.93
PSEN1-219ENST00000556951 RNF17Q9BXT8 1623 aaKnown RBP20.87■□□□□ 0.93
PSEN1-219ENST00000556951 DNMT1P26358 1616 aaKnown RBP20.86■□□□□ 0.93
PSEN1-219ENST00000556951 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
PSEN1-219ENST00000556951 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
PSEN1-219ENST00000556951 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.92
PSEN1-219ENST00000556951 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
PSEN1-219ENST00000556951 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
PSEN1-219ENST00000556951 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
PSEN1-219ENST00000556951 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
PSEN1-219ENST00000556951 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
PSEN1-219ENST00000556951 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.92
PSEN1-219ENST00000556951 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
PSEN1-219ENST00000556951 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
PSEN1-219ENST00000556951 ZNF777Q9ULD5 760 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-219ENST00000556951 SYNMO15061 1565 aa20.76■□□□□ 0.91
PSEN1-219ENST00000556951 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
PSEN1-219ENST00000556951 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms