RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 NUP160Q12769 1436 aa16.47■□□□□ 0.23
PRKCH-221ENST00000556245 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
PRKCH-221ENST00000556245 ANP32CO43423 234 aa16.46■□□□□ 0.23
PRKCH-221ENST00000556245 FBLN2P98095 1184 aa16.46■□□□□ 0.23
PRKCH-221ENST00000556245 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
PRKCH-221ENST00000556245 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
PRKCH-221ENST00000556245 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
PRKCH-221ENST00000556245 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
PRKCH-221ENST00000556245 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
PRKCH-221ENST00000556245 ADCY10Q96PN6 1610 aa16.44■□□□□ 0.22
PRKCH-221ENST00000556245 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
PRKCH-221ENST00000556245 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
PRKCH-221ENST00000556245 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
PRKCH-221ENST00000556245 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.22
PRKCH-221ENST00000556245 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
PRKCH-221ENST00000556245 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
PRKCH-221ENST00000556245 KIF14Q15058 1648 aa16.37■□□□□ 0.21
PRKCH-221ENST00000556245 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
PRKCH-221ENST00000556245 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
PRKCH-221ENST00000556245 ABCA8O94911 1581 aa16.36■□□□□ 0.21
PRKCH-221ENST00000556245 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRKCH-221ENST00000556245 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
PRKCH-221ENST00000556245 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
PRKCH-221ENST00000556245 ADGRL2O95490 1459 aa16.35■□□□□ 0.21
PRKCH-221ENST00000556245 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
PRKCH-221ENST00000556245 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
PRKCH-221ENST00000556245 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
PRKCH-221ENST00000556245 FOXD1Q16676 465 aa16.34■□□□□ 0.21
PRKCH-221ENST00000556245 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
PRKCH-221ENST00000556245 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
PRKCH-221ENST00000556245 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
PRKCH-221ENST00000556245 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
PRKCH-221ENST00000556245 ATP10BO94823 1461 aa16.3■□□□□ 0.2
PRKCH-221ENST00000556245 PZPP20742 1482 aa16.3■□□□□ 0.2
PRKCH-221ENST00000556245 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
PRKCH-221ENST00000556245 CDC42BPAQ5VT25 1732 aa16.29■□□□□ 0.2
PRKCH-221ENST00000556245 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
PRKCH-221ENST00000556245 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
PRKCH-221ENST00000556245 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
PRKCH-221ENST00000556245 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
PRKCH-221ENST00000556245 PTPRGP23470 1445 aa16.25■□□□□ 0.19
PRKCH-221ENST00000556245 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
PRKCH-221ENST00000556245 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
PRKCH-221ENST00000556245 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
PRKCH-221ENST00000556245 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
PRKCH-221ENST00000556245 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
PRKCH-221ENST00000556245 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
PRKCH-221ENST00000556245 PKD2Q13563 968 aa16.2■□□□□ 0.18
PRKCH-221ENST00000556245 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
PRKCH-221ENST00000556245 SPATA31E1Q6ZUB1 1445 aa16.18■□□□□ 0.18
PRKCH-221ENST00000556245 NEFLP07196 543 aa16.18■□□□□ 0.18
PRKCH-221ENST00000556245 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
PRKCH-221ENST00000556245 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
PRKCH-221ENST00000556245 CHD1O14646 1710 aa16.17■□□□□ 0.18
PRKCH-221ENST00000556245 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
PRKCH-221ENST00000556245 NUP155O75694 1391 aa16.17■□□□□ 0.18
PRKCH-221ENST00000556245 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-221ENST00000556245 FKBP8Q14318 412 aa16.15■□□□□ 0.18
PRKCH-221ENST00000556245 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
PRKCH-221ENST00000556245 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
PRKCH-221ENST00000556245 KIF15Q9NS87 1388 aa16.15■□□□□ 0.18
PRKCH-221ENST00000556245 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
PRKCH-221ENST00000556245 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
PRKCH-221ENST00000556245 HNRNPMP52272 730 aaKnown RBP eCLIP16.13■□□□□ 0.17
PRKCH-221ENST00000556245 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
PRKCH-221ENST00000556245 CDC42BPBQ9Y5S2 1711 aa16.12■□□□□ 0.17
PRKCH-221ENST00000556245 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
PRKCH-221ENST00000556245 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRKCH-221ENST00000556245 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
PRKCH-221ENST00000556245 ARHGEF12Q9NZN5 1544 aa16.11■□□□□ 0.17
PRKCH-221ENST00000556245 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
PRKCH-221ENST00000556245 USP47Q96K76 1375 aa16.09■□□□□ 0.17
PRKCH-221ENST00000556245 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
PRKCH-221ENST00000556245 BCANQ96GW7 911 aa16.07■□□□□ 0.16
PRKCH-221ENST00000556245 ABCC2Q92887 1545 aa16.07■□□□□ 0.16
PRKCH-221ENST00000556245 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
PRKCH-221ENST00000556245 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
PRKCH-221ENST00000556245 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
PRKCH-221ENST00000556245 KDM5CP41229 1560 aa16.06■□□□□ 0.16
PRKCH-221ENST00000556245 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
PRKCH-221ENST00000556245 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
PRKCH-221ENST00000556245 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
PRKCH-221ENST00000556245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRKCH-221ENST00000556245 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
PRKCH-221ENST00000556245 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
PRKCH-221ENST00000556245 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
PRKCH-221ENST00000556245 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
PRKCH-221ENST00000556245 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.15
PRKCH-221ENST00000556245 CCDC184Q52MB2 194 aa16.02■□□□□ 0.15
PRKCH-221ENST00000556245 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
PRKCH-221ENST00000556245 ROCK2O75116 1388 aaKnown RBP16.01■□□□□ 0.15
PRKCH-221ENST00000556245 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
PRKCH-221ENST00000556245 UNC13BO14795 1591 aa16■□□□□ 0.15
PRKCH-221ENST00000556245 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
PRKCH-221ENST00000556245 PLXNC1O60486 1568 aa16■□□□□ 0.15
PRKCH-221ENST00000556245 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
PRKCH-221ENST00000556245 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
PRKCH-221ENST00000556245 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
PRKCH-221ENST00000556245 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
PRKCH-221ENST00000556245 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms