RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 KIF7Q2M1P5 1343 aa10.47□□□□□ -0.73
CHD8-209ENST00000555935 GRIN2BQ13224 1484 aa10.47□□□□□ -0.73
CHD8-209ENST00000555935 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.74
CHD8-209ENST00000555935 SAMD9Q5K651 1589 aa10.46□□□□□ -0.74
CHD8-209ENST00000555935 RPRD2Q5VT52 1461 aaKnown RBP10.45□□□□□ -0.74
CHD8-209ENST00000555935 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
CHD8-209ENST00000555935 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
CHD8-209ENST00000555935 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
CHD8-209ENST00000555935 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
CHD8-209ENST00000555935 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
CHD8-209ENST00000555935 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
CHD8-209ENST00000555935 PPM1GO15355 546 aaPredicted RBP10.43□□□□□ -0.74
CHD8-209ENST00000555935 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
CHD8-209ENST00000555935 ARID4BQ4LE39 1312 aaPredicted RBP10.42□□□□□ -0.74
CHD8-209ENST00000555935 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 MS4A1P11836 297 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 NBPF8Q3BBV2 869 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 LRRIQ1Q96JM4 1722 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
CHD8-209ENST00000555935 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
CHD8-209ENST00000555935 KDM6BO15054 1643 aa10.4□□□□□ -0.74
CHD8-209ENST00000555935 NEFMP07197 916 aa10.4□□□□□ -0.74
CHD8-209ENST00000555935 ROCK1Q13464 1354 aa10.4□□□□□ -0.75
CHD8-209ENST00000555935 CHIC2Q9UKJ5 165 aa10.39□□□□□ -0.75
CHD8-209ENST00000555935 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
CHD8-209ENST00000555935 PNISRQ8TF01 805 aaKnown RBP10.38□□□□□ -0.75
CHD8-209ENST00000555935 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
CHD8-209ENST00000555935 FANCD2Q9BXW9 1451 aa10.38□□□□□ -0.75
CHD8-209ENST00000555935 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
CHD8-209ENST00000555935 PDE4AP27815 886 aa10.38□□□□□ -0.75
CHD8-209ENST00000555935 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
CHD8-209ENST00000555935 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
CHD8-209ENST00000555935 MAGI3Q5TCQ9 1506 aa10.37□□□□□ -0.75
CHD8-209ENST00000555935 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
CHD8-209ENST00000555935 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
CHD8-209ENST00000555935 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
CHD8-209ENST00000555935 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
CHD8-209ENST00000555935 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
CHD8-209ENST00000555935 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
CHD8-209ENST00000555935 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
CHD8-209ENST00000555935 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
CHD8-209ENST00000555935 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
CHD8-209ENST00000555935 USP47Q96K76 1375 aa10.35□□□□□ -0.75
CHD8-209ENST00000555935 FOXD1Q16676 465 aa10.34□□□□□ -0.75
CHD8-209ENST00000555935 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
CHD8-209ENST00000555935 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
CHD8-209ENST00000555935 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
CHD8-209ENST00000555935 EXOC6Q8TAG9 804 aa10.33□□□□□ -0.76
CHD8-209ENST00000555935 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
CHD8-209ENST00000555935 DAPK1P53355 1430 aa10.32□□□□□ -0.76
CHD8-209ENST00000555935 GSE1Q14687 1217 aa10.32□□□□□ -0.76
CHD8-209ENST00000555935 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
CHD8-209ENST00000555935 KIF14Q15058 1648 aa10.32□□□□□ -0.76
CHD8-209ENST00000555935 RALBP1Q15311 655 aa10.31□□□□□ -0.76
CHD8-209ENST00000555935 UBE2Q2Q8WVN8 375 aa10.31□□□□□ -0.76
CHD8-209ENST00000555935 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
CHD8-209ENST00000555935 EPRSP07814 1512 aaKnown RBP10.31□□□□□ -0.76
CHD8-209ENST00000555935 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
CHD8-209ENST00000555935 KDM5CP41229 1560 aa10.31□□□□□ -0.76
CHD8-209ENST00000555935 DNMT1P26358 1616 aaKnown RBP10.3□□□□□ -0.76
CHD8-209ENST00000555935 NESP48681 1621 aa10.3□□□□□ -0.76
CHD8-209ENST00000555935 ABCC5O15440 1437 aa10.29□□□□□ -0.76
CHD8-209ENST00000555935 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
CHD8-209ENST00000555935 PZPP20742 1482 aa10.28□□□□□ -0.76
CHD8-209ENST00000555935 RALGAPBQ86X10 1494 aa10.28□□□□□ -0.76
CHD8-209ENST00000555935 INSRP06213 1382 aa10.28□□□□□ -0.76
CHD8-209ENST00000555935 KIAA1107Q9UPP5 1409 aa10.27□□□□□ -0.76
CHD8-209ENST00000555935 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.76
CHD8-209ENST00000555935 NFKBIBQ15653 356 aa10.26□□□□□ -0.77
CHD8-209ENST00000555935 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
CHD8-209ENST00000555935 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
CHD8-209ENST00000555935 BRPF3Q9ULD4 1205 aa10.26□□□□□ -0.77
CHD8-209ENST00000555935 ZMYM4Q5VZL5 1548 aa10.26□□□□□ -0.77
CHD8-209ENST00000555935 CNGB1Q14028 1251 aaPredicted RBP10.25□□□□□ -0.77
CHD8-209ENST00000555935 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
CHD8-209ENST00000555935 WDR62O43379 1518 aa10.25□□□□□ -0.77
CHD8-209ENST00000555935 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
CHD8-209ENST00000555935 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
CHD8-209ENST00000555935 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
CHD8-209ENST00000555935 CDK13Q14004 1512 aaKnown RBP10.24□□□□□ -0.77
CHD8-209ENST00000555935 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
CHD8-209ENST00000555935 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
CHD8-209ENST00000555935 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
CHD8-209ENST00000555935 E9PCH4 1651 aa10.22□□□□□ -0.77
CHD8-209ENST00000555935 TDRD9Q8NDG6 1382 aaKnown RBP10.22□□□□□ -0.77
CHD8-209ENST00000555935 CARD11Q9BXL7 1154 aa10.21□□□□□ -0.77
CHD8-209ENST00000555935 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
CHD8-209ENST00000555935 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.78
CHD8-209ENST00000555935 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.78
CHD8-209ENST00000555935 FAM43AQ8N2R8 423 aa10.21□□□□□ -0.78
CHD8-209ENST00000555935 ADGRL2O95490 1459 aa10.21□□□□□ -0.78
CHD8-209ENST00000555935 IQGAP2Q13576 1575 aa10.2□□□□□ -0.78
CHD8-209ENST00000555935 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
CHD8-209ENST00000555935 BLMP54132 1417 aaPredicted RBP10.2□□□□□ -0.78
CHD8-209ENST00000555935 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
CHD8-209ENST00000555935 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
CHD8-209ENST00000555935 KDM2BQ8NHM5 1336 aa10.19□□□□□ -0.78
CHD8-209ENST00000555935 FAM161AQ3B820 660 aa10.19□□□□□ -0.78
CHD8-209ENST00000555935 ADGBQ8N7X0 1667 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms