RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 NPM3O75607 178 aaKnown RBP7.76□□□□□ -1.17
LINC00640-202ENST00000555801 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
LINC00640-202ENST00000555801 CFAP43Q8NDM7 1665 aa7.76□□□□□ -1.17
LINC00640-202ENST00000555801 IQSEC2Q5JU85 1478 aa7.75□□□□□ -1.17
LINC00640-202ENST00000555801 PTPRTO14522 1441 aa7.75□□□□□ -1.17
LINC00640-202ENST00000555801 ARAP3Q8WWN8 1544 aa7.74□□□□□ -1.17
LINC00640-202ENST00000555801 CARMIL2Q6F5E8 1435 aa7.73□□□□□ -1.17
LINC00640-202ENST00000555801 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
LINC00640-202ENST00000555801 FXR2P51116 673 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00640-202ENST00000555801 POTEAQ6S8J7 498 aa7.72□□□□□ -1.17
LINC00640-202ENST00000555801 REM2Q8IYK8 340 aaPredicted RBP7.72□□□□□ -1.17
LINC00640-202ENST00000555801 PREX1Q8TCU6 1659 aa7.72□□□□□ -1.17
LINC00640-202ENST00000555801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.71□□□□□ -1.18
LINC00640-202ENST00000555801 HNRNPUL2Q1KMD3 747 aaKnown RBP7.71□□□□□ -1.18
LINC00640-202ENST00000555801 UHRF1BP1Q6BDS2 1440 aa7.7□□□□□ -1.18
LINC00640-202ENST00000555801 SETD1AO15047 1707 aaKnown RBP7.7□□□□□ -1.18
LINC00640-202ENST00000555801 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
LINC00640-202ENST00000555801 SIGLEC1Q9BZZ2 1709 aa7.69□□□□□ -1.18
LINC00640-202ENST00000555801 FER1L4A9Z1Z3 1794 aa7.69□□□□□ -1.18
LINC00640-202ENST00000555801 POGZQ7Z3K3 1410 aa7.69□□□□□ -1.18
LINC00640-202ENST00000555801 NCKAP5LQ9HCH0 1330 aa7.68□□□□□ -1.18
LINC00640-202ENST00000555801 FANCAO15360 1455 aa7.67□□□□□ -1.18
LINC00640-202ENST00000555801 ARHGEF40Q8TER5 1519 aa7.67□□□□□ -1.18
LINC00640-202ENST00000555801 TTC37Q6PGP7 1564 aa7.67□□□□□ -1.18
LINC00640-202ENST00000555801 TOM1O60784 492 aa7.66□□□□□ -1.18
LINC00640-202ENST00000555801 POLA2Q14181 598 aa7.65□□□□□ -1.18
LINC00640-202ENST00000555801 UPF1Q92900 1129 aaKnown RBP eCLIP7.65□□□□□ -1.18
LINC00640-202ENST00000555801 DISP1Q96F81 1524 aa7.64□□□□□ -1.19
LINC00640-202ENST00000555801 PITPNM1O00562 1244 aa7.64□□□□□ -1.19
LINC00640-202ENST00000555801 NCOA1Q15788 1441 aa7.63□□□□□ -1.19
LINC00640-202ENST00000555801 AKNAQ7Z591 1439 aa7.63□□□□□ -1.19
LINC00640-202ENST00000555801 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
LINC00640-202ENST00000555801 GABBR2O75899 941 aa7.62□□□□□ -1.19
LINC00640-202ENST00000555801 SLC4A2P04920 1241 aa7.62□□□□□ -1.19
LINC00640-202ENST00000555801 SAMD1Q6SPF0 538 aaPredicted RBP7.62□□□□□ -1.19
LINC00640-202ENST00000555801 BIVM-ERCC5R4GMW8 1640 aa7.61□□□□□ -1.19
LINC00640-202ENST00000555801 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
LINC00640-202ENST00000555801 PHLDB1Q86UU1 1377 aa7.6□□□□□ -1.19
LINC00640-202ENST00000555801 KIAA0556O60303 1618 aa7.6□□□□□ -1.19
LINC00640-202ENST00000555801 IQGAP2Q13576 1575 aa7.59□□□□□ -1.19
LINC00640-202ENST00000555801 ZFYVE16Q7Z3T8 1539 aa7.59□□□□□ -1.19
LINC00640-202ENST00000555801 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
LINC00640-202ENST00000555801 DENND4BO75064 1496 aaPredicted RBP7.59□□□□□ -1.19
LINC00640-202ENST00000555801 CAMSAP1Q5T5Y3 1602 aa7.59□□□□□ -1.19
LINC00640-202ENST00000555801 IGF1RP08069 1367 aa7.59□□□□□ -1.2
LINC00640-202ENST00000555801 ARHGEF12Q9NZN5 1544 aa7.58□□□□□ -1.2
LINC00640-202ENST00000555801 NEO1Q92859 1461 aa7.58□□□□□ -1.2
LINC00640-202ENST00000555801 KIF27Q86VH2 1401 aa7.57□□□□□ -1.2
LINC00640-202ENST00000555801 IFFO2Q5TF58 517 aa7.56□□□□□ -1.2
LINC00640-202ENST00000555801 RICTORQ6R327 1708 aa7.55□□□□□ -1.2
LINC00640-202ENST00000555801 SETD1BQ9UPS6 1966 aaKnown RBP7.55□□□□□ -1.2
LINC00640-202ENST00000555801 ABCA9Q8IUA7 1624 aa7.54□□□□□ -1.2
LINC00640-202ENST00000555801 ALKQ9UM73 1620 aa7.54□□□□□ -1.2
LINC00640-202ENST00000555801 FHOD3Q2V2M9 1422 aa7.53□□□□□ -1.2
LINC00640-202ENST00000555801 EFCAB5A4FU69 1503 aa7.53□□□□□ -1.2
LINC00640-202ENST00000555801 CARMIL1Q5VZK9 1371 aa7.53□□□□□ -1.2
LINC00640-202ENST00000555801 TRAPPC8Q9Y2L5 1435 aa7.52□□□□□ -1.2
LINC00640-202ENST00000555801 C3P01024 1663 aa7.52□□□□□ -1.21
LINC00640-202ENST00000555801 C19orf67A6NJJ6 358 aa7.52□□□□□ -1.21
LINC00640-202ENST00000555801 ESF1Q9H501 851 aaKnown RBP7.52□□□□□ -1.21
LINC00640-202ENST00000555801 HECW1Q76N89 1606 aa7.52□□□□□ -1.21
LINC00640-202ENST00000555801 ABCA8O94911 1581 aa7.51□□□□□ -1.21
LINC00640-202ENST00000555801 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
LINC00640-202ENST00000555801 RBM33Q96EV2 1170 aaKnown RBP7.51□□□□□ -1.21
LINC00640-202ENST00000555801 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
LINC00640-202ENST00000555801 PTPRKQ15262 1439 aa7.51□□□□□ -1.21
LINC00640-202ENST00000555801 PKD2Q13563 968 aa7.5□□□□□ -1.21
LINC00640-202ENST00000555801 ATP10AO60312 1499 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 ATP10BO94823 1461 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 UGGT2Q9NYU1 1516 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 POTEMA6NI47 508 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 C9orf84Q5VXU9 1444 aa7.49□□□□□ -1.21
LINC00640-202ENST00000555801 P3H3Q8IVL6 736 aa7.48□□□□□ -1.21
LINC00640-202ENST00000555801 SETBP1Q9Y6X0 1596 aa7.48□□□□□ -1.21
LINC00640-202ENST00000555801 SHANK2Q9UPX8 1470 aa7.48□□□□□ -1.21
LINC00640-202ENST00000555801 CPS1P31327 1500 aa7.47□□□□□ -1.21
LINC00640-202ENST00000555801 MAGI2Q86UL8 1455 aa7.46□□□□□ -1.22
LINC00640-202ENST00000555801 SCAPERQ9BY12 1400 aa7.45□□□□□ -1.22
LINC00640-202ENST00000555801 TCOF1Q13428 1488 aaKnown RBP7.45□□□□□ -1.22
LINC00640-202ENST00000555801 ZRANB1Q9UGI0 708 aa7.45□□□□□ -1.22
LINC00640-202ENST00000555801 PRKAR2AP13861 404 aaKnown RBP7.44□□□□□ -1.22
LINC00640-202ENST00000555801 POTEGQ6S5H5 508 aa7.44□□□□□ -1.22
LINC00640-202ENST00000555801 RAPGEF2Q9Y4G8 1499 aa7.43□□□□□ -1.22
LINC00640-202ENST00000555801 POTEIP0CG38 1075 aa7.43□□□□□ -1.22
LINC00640-202ENST00000555801 GOLGA3Q08378 1498 aa7.43□□□□□ -1.22
LINC00640-202ENST00000555801 PLA2R1Q13018 1463 aa7.43□□□□□ -1.22
LINC00640-202ENST00000555801 LRRC7Q96NW7 1537 aa7.42□□□□□ -1.22
LINC00640-202ENST00000555801 SUPT6HQ7KZ85 1726 aaKnown RBP7.42□□□□□ -1.22
LINC00640-202ENST00000555801 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
LINC00640-202ENST00000555801 KCNA4P22459 653 aa7.41□□□□□ -1.22
LINC00640-202ENST00000555801 RXRBP28702 533 aa7.41□□□□□ -1.22
LINC00640-202ENST00000555801 PCDH10Q9P2E7 1040 aa7.41□□□□□ -1.22
LINC00640-202ENST00000555801 NUTM2BA6NNL0 878 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-202ENST00000555801 NUTM2EB1AL46 878 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-202ENST00000555801 MEX3CQ5U5Q3 659 aaKnown RBP7.4□□□□□ -1.22
LINC00640-202ENST00000555801 NUTM2DQ5VT03 806 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-202ENST00000555801 NUTM2AQ8IVF1 878 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-202ENST00000555801 VWDEQ8N2E2 1590 aa7.39□□□□□ -1.23
LINC00640-202ENST00000555801 CFAP74Q9C0B2 1584 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms