RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 DSG3P32926 999 aa10.65□□□□□ -0.7
NEK9-207ENST00000555763 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
NEK9-207ENST00000555763 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
NEK9-207ENST00000555763 PTPRTO14522 1441 aa10.62□□□□□ -0.71
NEK9-207ENST00000555763 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
NEK9-207ENST00000555763 FANCAO15360 1455 aa10.6□□□□□ -0.71
NEK9-207ENST00000555763 NEO1Q92859 1461 aa10.58□□□□□ -0.72
NEK9-207ENST00000555763 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
NEK9-207ENST00000555763 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
NEK9-207ENST00000555763 ABCA8O94911 1581 aa10.57□□□□□ -0.72
NEK9-207ENST00000555763 ZMYM4Q5VZL5 1548 aa10.57□□□□□ -0.72
NEK9-207ENST00000555763 ARHGEF12Q9NZN5 1544 aa10.56□□□□□ -0.72
NEK9-207ENST00000555763 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
NEK9-207ENST00000555763 CAPN15O75808 1086 aa10.55□□□□□ -0.72
NEK9-207ENST00000555763 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
NEK9-207ENST00000555763 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
NEK9-207ENST00000555763 C3P01024 1663 aa10.53□□□□□ -0.72
NEK9-207ENST00000555763 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
NEK9-207ENST00000555763 RAPGEF3O95398 923 aa10.52□□□□□ -0.73
NEK9-207ENST00000555763 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
NEK9-207ENST00000555763 ZFYVE16Q7Z3T8 1539 aa10.51□□□□□ -0.73
NEK9-207ENST00000555763 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
NEK9-207ENST00000555763 IGF1RP08069 1367 aa10.51□□□□□ -0.73
NEK9-207ENST00000555763 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
NEK9-207ENST00000555763 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
NEK9-207ENST00000555763 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
NEK9-207ENST00000555763 AKNAQ7Z591 1439 aa10.49□□□□□ -0.73
NEK9-207ENST00000555763 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
NEK9-207ENST00000555763 NCOA1Q15788 1441 aa10.48□□□□□ -0.73
NEK9-207ENST00000555763 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
NEK9-207ENST00000555763 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
NEK9-207ENST00000555763 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
NEK9-207ENST00000555763 HECW1Q76N89 1606 aa10.44□□□□□ -0.74
NEK9-207ENST00000555763 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
NEK9-207ENST00000555763 ZNF142P52746 1687 aaPredicted RBP10.44□□□□□ -0.74
NEK9-207ENST00000555763 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
NEK9-207ENST00000555763 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
NEK9-207ENST00000555763 HSPA1LP34931 641 aa10.43□□□□□ -0.74
NEK9-207ENST00000555763 CAMSAP1Q5T5Y3 1602 aa10.43□□□□□ -0.74
NEK9-207ENST00000555763 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
NEK9-207ENST00000555763 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
NEK9-207ENST00000555763 POLR1AO95602 1720 aaPredicted RBP10.38□□□□□ -0.75
NEK9-207ENST00000555763 ZNF335Q9H4Z2 1342 aaPredicted RBP10.37□□□□□ -0.75
NEK9-207ENST00000555763 CEBPAP49715 358 aaPredicted RBP10.37□□□□□ -0.75
NEK9-207ENST00000555763 MROH2AA6NES4 1674 aa10.37□□□□□ -0.75
NEK9-207ENST00000555763 ATP10BO94823 1461 aa10.36□□□□□ -0.75
NEK9-207ENST00000555763 C9orf84Q5VXU9 1444 aa10.36□□□□□ -0.75
NEK9-207ENST00000555763 MLECQ14165 292 aa10.35□□□□□ -0.75
NEK9-207ENST00000555763 FKBP8Q14318 412 aa10.35□□□□□ -0.75
NEK9-207ENST00000555763 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
NEK9-207ENST00000555763 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
NEK9-207ENST00000555763 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
NEK9-207ENST00000555763 GOLGA3Q08378 1498 aa10.34□□□□□ -0.75
NEK9-207ENST00000555763 ATP10AO60312 1499 aa10.33□□□□□ -0.76
NEK9-207ENST00000555763 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
NEK9-207ENST00000555763 CPS1P31327 1500 aa10.33□□□□□ -0.76
NEK9-207ENST00000555763 TCOF1Q13428 1488 aaKnown RBP10.32□□□□□ -0.76
NEK9-207ENST00000555763 RAPGEF6Q8TEU7 1601 aa10.32□□□□□ -0.76
NEK9-207ENST00000555763 ABCB7O75027 752 aa10.31□□□□□ -0.76
NEK9-207ENST00000555763 TRAPPC8Q9Y2L5 1435 aa10.3□□□□□ -0.76
NEK9-207ENST00000555763 DIP2CQ9Y2E4 1556 aa10.3□□□□□ -0.76
NEK9-207ENST00000555763 AGLP35573 1532 aa10.29□□□□□ -0.76
NEK9-207ENST00000555763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEK9-207ENST00000555763 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
NEK9-207ENST00000555763 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
NEK9-207ENST00000555763 CEP170BQ9Y4F5 1589 aaPredicted RBP10.28□□□□□ -0.76
NEK9-207ENST00000555763 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
NEK9-207ENST00000555763 ABCA6Q8N139 1617 aa10.28□□□□□ -0.76
NEK9-207ENST00000555763 KDM5CP41229 1560 aa10.27□□□□□ -0.76
NEK9-207ENST00000555763 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.77
NEK9-207ENST00000555763 STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
NEK9-207ENST00000555763 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
NEK9-207ENST00000555763 NPATQ14207 1427 aa10.25□□□□□ -0.77
NEK9-207ENST00000555763 TOM1O60784 492 aa10.25□□□□□ -0.77
NEK9-207ENST00000555763 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
NEK9-207ENST00000555763 SYNMO15061 1565 aa10.24□□□□□ -0.77
NEK9-207ENST00000555763 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
NEK9-207ENST00000555763 XIRP1Q702N8 1843 aaKnown RBP10.22□□□□□ -0.77
NEK9-207ENST00000555763 POTEAQ6S8J7 498 aa10.22□□□□□ -0.77
NEK9-207ENST00000555763 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
NEK9-207ENST00000555763 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
NEK9-207ENST00000555763 NCKAP5LQ9HCH0 1330 aa10.22□□□□□ -0.77
NEK9-207ENST00000555763 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
NEK9-207ENST00000555763 SHANK2Q9UPX8 1470 aa10.21□□□□□ -0.78
NEK9-207ENST00000555763 CLTCQ00610 1675 aaKnown RBP10.21□□□□□ -0.78
NEK9-207ENST00000555763 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
NEK9-207ENST00000555763 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
NEK9-207ENST00000555763 NUP153P49790 1475 aaKnown RBP10.2□□□□□ -0.78
NEK9-207ENST00000555763 PKD2Q13563 968 aa10.2□□□□□ -0.78
NEK9-207ENST00000555763 CNTLNQ9NXG0 1405 aa10.2□□□□□ -0.78
NEK9-207ENST00000555763 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
NEK9-207ENST00000555763 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
NEK9-207ENST00000555763 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
NEK9-207ENST00000555763 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
NEK9-207ENST00000555763 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
NEK9-207ENST00000555763 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.783e-7■■■■■ 27.5
NEK9-207ENST00000555763 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
NEK9-207ENST00000555763 IQGAP1P46940 1657 aa10.14□□□□□ -0.79
NEK9-207ENST00000555763 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
NEK9-207ENST00000555763 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms