RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
TUBB3-209ENST00000555609 KDM6BO15054 1643 aa22.55■■□□□ 1.2
TUBB3-209ENST00000555609 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
TUBB3-209ENST00000555609 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
TUBB3-209ENST00000555609 ABCC5O15440 1437 aa22.53■■□□□ 1.2
TUBB3-209ENST00000555609 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
TUBB3-209ENST00000555609 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
TUBB3-209ENST00000555609 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
TUBB3-209ENST00000555609 NUP153P49790 1475 aaKnown RBP22.52■■□□□ 1.2
TUBB3-209ENST00000555609 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
TUBB3-209ENST00000555609 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
TUBB3-209ENST00000555609 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TUBB3-209ENST00000555609 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
TUBB3-209ENST00000555609 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
TUBB3-209ENST00000555609 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
TUBB3-209ENST00000555609 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
TUBB3-209ENST00000555609 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
TUBB3-209ENST00000555609 ITSN2Q9NZM3 1697 aa22.43■■□□□ 1.18
TUBB3-209ENST00000555609 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
TUBB3-209ENST00000555609 CCDC7Q96M83 1385 aa22.42■■□□□ 1.18
TUBB3-209ENST00000555609 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ERICH6BQ5W0A0 696 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
TUBB3-209ENST00000555609 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 BCANQ96GW7 911 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
TUBB3-209ENST00000555609 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
TUBB3-209ENST00000555609 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
TUBB3-209ENST00000555609 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
TUBB3-209ENST00000555609 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
TUBB3-209ENST00000555609 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
TUBB3-209ENST00000555609 PZPP20742 1482 aa22.34■■□□□ 1.17
TUBB3-209ENST00000555609 CFDP1Q9UEE9 299 aaPredicted RBP22.33■■□□□ 1.17
TUBB3-209ENST00000555609 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
TUBB3-209ENST00000555609 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
TUBB3-209ENST00000555609 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
TUBB3-209ENST00000555609 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 KIAA1107Q9UPP5 1409 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 CROCC2H7BZ55 1655 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 FOXD1Q16676 465 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 ANKRD30AQ9BXX3 1397 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 NUP160Q12769 1436 aa22.29■■□□□ 1.16
TUBB3-209ENST00000555609 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
TUBB3-209ENST00000555609 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
TUBB3-209ENST00000555609 SHANK2Q9UPX8 1470 aa22.27■■□□□ 1.16
TUBB3-209ENST00000555609 C11orf95C9JLR9 678 aaPredicted RBP22.26■■□□□ 1.15
TUBB3-209ENST00000555609 PLB1Q6P1J6 1458 aa22.24■■□□□ 1.15
TUBB3-209ENST00000555609 KIF7Q2M1P5 1343 aa22.24■■□□□ 1.15
TUBB3-209ENST00000555609 ANP32EQ9BTT0 268 aa22.23■■□□□ 1.15
TUBB3-209ENST00000555609 ZBED9Q6R2W3 1325 aa22.22■■□□□ 1.15
TUBB3-209ENST00000555609 KIF14Q15058 1648 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 UHRF1BP1Q6BDS2 1440 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 ABCA8O94911 1581 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 ANKRD50Q9ULJ7 1429 aa22.2■■□□□ 1.14
TUBB3-209ENST00000555609 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
TUBB3-209ENST00000555609 RBM19Q9Y4C8 960 aaKnown RBP22.19■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
TUBB3-209ENST00000555609 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
TUBB3-209ENST00000555609 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
TUBB3-209ENST00000555609 PKD2Q13563 968 aa22.14■■□□□ 1.13
TUBB3-209ENST00000555609 PPP4R2Q9NY27 417 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 USP47Q96K76 1375 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 CDC42BPAQ5VT25 1732 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 RALGAPBQ86X10 1494 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 ATP10BO94823 1461 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 KDM5CP41229 1560 aa22.11■■□□□ 1.13
TUBB3-209ENST00000555609 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
TUBB3-209ENST00000555609 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
TUBB3-209ENST00000555609 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 PTPRGP23470 1445 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 TSPY4P0CV99 314 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 TSPY10P0CW01 314 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 NUP155O75694 1391 aa22.07■■□□□ 1.12
TUBB3-209ENST00000555609 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
TUBB3-209ENST00000555609 BCORL1Q5H9F3 1711 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
TUBB3-209ENST00000555609 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 KIF15Q9NS87 1388 aa22■■□□□ 1.11
TUBB3-209ENST00000555609 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
TUBB3-209ENST00000555609 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
TUBB3-209ENST00000555609 IRX6P78412 446 aaPredicted RBP21.94■■□□□ 1.1
TUBB3-209ENST00000555609 MAST1Q9Y2H9 1570 aa21.94■■□□□ 1.1
TUBB3-209ENST00000555609 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms