RNA–Protein interactions for RNA: ENST00000555110.1

PRKCH-212, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-212ENST00000555110 YEATS2Q9ULM3 1422 aa6.5□□□□□ -1.37
PRKCH-212ENST00000555110 RIMS1Q86UR5 1692 aaKnown RBP6.49□□□□□ -1.37
PRKCH-212ENST00000555110 CFAP74Q9C0B2 1584 aa6.49□□□□□ -1.37
PRKCH-212ENST00000555110 DMRT2Q9Y5R5 561 aa6.49□□□□□ -1.37
PRKCH-212ENST00000555110 NUP153P49790 1475 aaKnown RBP6.47□□□□□ -1.37
PRKCH-212ENST00000555110 IQSEC2Q5JU85 1478 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 ARHGEF12Q9NZN5 1544 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 TPRNQ4KMQ1 711 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 ARXQ96QS3 562 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 PPP6R1Q9UPN7 881 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 SAMD9Q5K651 1589 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 RICTORQ6R327 1708 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 RAPGEF6Q8TEU7 1601 aa6.47□□□□□ -1.37
PRKCH-212ENST00000555110 TULP1O00294 542 aaPredicted RBP6.46□□□□□ -1.38
PRKCH-212ENST00000555110 C9orf84Q5VXU9 1444 aa6.46□□□□□ -1.38
PRKCH-212ENST00000555110 BCANQ96GW7 911 aa6.46□□□□□ -1.38
PRKCH-212ENST00000555110 PTPRTO14522 1441 aa6.45□□□□□ -1.38
PRKCH-212ENST00000555110 UHRF1BP1Q6BDS2 1440 aa6.45□□□□□ -1.38
PRKCH-212ENST00000555110 PLCB2Q00722 1185 aa6.45□□□□□ -1.38
PRKCH-212ENST00000555110 SRCAPQ6ZRS2 3230 aa6.44□□□□□ -1.38
PRKCH-212ENST00000555110 PLEKHD1A6NEE1 506 aa6.44□□□□□ -1.38
PRKCH-212ENST00000555110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.44□□□□□ -1.38
PRKCH-212ENST00000555110 NPM3O75607 178 aaKnown RBP6.44□□□□□ -1.38
PRKCH-212ENST00000555110 HNRNPUL2Q1KMD3 747 aaKnown RBP6.44□□□□□ -1.38
PRKCH-212ENST00000555110 PREX1Q8TCU6 1659 aa6.44□□□□□ -1.38
PRKCH-212ENST00000555110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRKCH-212ENST00000555110 FER1L4A9Z1Z3 1794 aa6.44□□□□□ -1.38
PRKCH-212ENST00000555110 ATP10AO60312 1499 aa6.43□□□□□ -1.38
PRKCH-212ENST00000555110 HECW1Q76N89 1606 aa6.43□□□□□ -1.38
PRKCH-212ENST00000555110 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
PRKCH-212ENST00000555110 P3H3Q8IVL6 736 aa6.42□□□□□ -1.38
PRKCH-212ENST00000555110 SENP3Q9H4L4 574 aaPredicted RBP6.42□□□□□ -1.38
PRKCH-212ENST00000555110 PLCH2O75038 1416 aa6.42□□□□□ -1.38
PRKCH-212ENST00000555110 SCAPERQ9BY12 1400 aa6.42□□□□□ -1.38
PRKCH-212ENST00000555110 ZNF518AQ6AHZ1 1483 aa6.41□□□□□ -1.38
PRKCH-212ENST00000555110 MLECQ14165 292 aa6.41□□□□□ -1.38
PRKCH-212ENST00000555110 NCOA1Q15788 1441 aa6.41□□□□□ -1.38
PRKCH-212ENST00000555110 REREQ9P2R6 1566 aa6.4□□□□□ -1.38
PRKCH-212ENST00000555110 LTBP4Q8N2S1 1624 aa6.4□□□□□ -1.38
PRKCH-212ENST00000555110 KDM5CP41229 1560 aa6.4□□□□□ -1.39
PRKCH-212ENST00000555110 STRCQ7RTU9 1775 aa6.39□□□□□ -1.39
PRKCH-212ENST00000555110 HAP1P54257 671 aaPredicted RBP6.39□□□□□ -1.39
PRKCH-212ENST00000555110 CNTLNQ9NXG0 1405 aa6.39□□□□□ -1.39
PRKCH-212ENST00000555110 TRAPPC8Q9Y2L5 1435 aa6.39□□□□□ -1.39
PRKCH-212ENST00000555110 SETD1BQ9UPS6 1966 aaKnown RBP6.38□□□□□ -1.39
PRKCH-212ENST00000555110 CEBPAP49715 358 aaPredicted RBP6.38□□□□□ -1.39
PRKCH-212ENST00000555110 EFCAB2Q5VUJ9 269 aa6.38□□□□□ -1.39
PRKCH-212ENST00000555110 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
PRKCH-212ENST00000555110 AGLP35573 1532 aa6.38□□□□□ -1.39
PRKCH-212ENST00000555110 NPATQ14207 1427 aa6.37□□□□□ -1.39
PRKCH-212ENST00000555110 FKBP8Q14318 412 aa6.37□□□□□ -1.39
PRKCH-212ENST00000555110 DIP2CQ9Y2E4 1556 aa6.36□□□□□ -1.39
PRKCH-212ENST00000555110 MLH3Q9UHC1 1453 aa6.36□□□□□ -1.39
PRKCH-212ENST00000555110 EEA1Q15075 1411 aa6.36□□□□□ -1.39
PRKCH-212ENST00000555110 PLA2R1Q13018 1463 aa6.35□□□□□ -1.39
PRKCH-212ENST00000555110 ESF1Q9H501 851 aaKnown RBP6.35□□□□□ -1.39
PRKCH-212ENST00000555110 CDK13Q14004 1512 aaKnown RBP6.35□□□□□ -1.39
PRKCH-212ENST00000555110 UBAP1LF5GYI3 381 aa6.34□□□□□ -1.39
PRKCH-212ENST00000555110 PKD2Q13563 968 aa6.34□□□□□ -1.39
PRKCH-212ENST00000555110 CDK11AQ9UQ88 783 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-212ENST00000555110 KIF14Q15058 1648 aa6.34□□□□□ -1.39
PRKCH-212ENST00000555110 ARHGAP5Q13017 1502 aa6.34□□□□□ -1.39
PRKCH-212ENST00000555110 CLIP1P30622 1438 aa6.33□□□□□ -1.4
PRKCH-212ENST00000555110 TROQ12816 1431 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-212ENST00000555110 FMN1Q68DA7 1419 aa6.33□□□□□ -1.4
PRKCH-212ENST00000555110 TCOF1Q13428 1488 aaKnown RBP6.33□□□□□ -1.4
PRKCH-212ENST00000555110 MYO5CQ9NQX4 1742 aa6.33□□□□□ -1.4
PRKCH-212ENST00000555110 C3P01024 1663 aa6.33□□□□□ -1.4
PRKCH-212ENST00000555110 CAMSAP1Q5T5Y3 1602 aa6.32□□□□□ -1.4
PRKCH-212ENST00000555110 ABCA6Q8N139 1617 aa6.32□□□□□ -1.4
PRKCH-212ENST00000555110 ABCC1P33527 1531 aa6.32□□□□□ -1.4
PRKCH-212ENST00000555110 AFAP1Q8N556 730 aa6.32□□□□□ -1.4
PRKCH-212ENST00000555110 MED1Q15648 1581 aaPredicted RBP6.31□□□□□ -1.4
PRKCH-212ENST00000555110 ZNF335Q9H4Z2 1342 aaPredicted RBP6.31□□□□□ -1.4
PRKCH-212ENST00000555110 MROH2AA6NES4 1674 aa6.3□□□□□ -1.4
PRKCH-212ENST00000555110 ZNF142P52746 1687 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-212ENST00000555110 CPS1P31327 1500 aa6.3□□□□□ -1.4
PRKCH-212ENST00000555110 RANGAP1P46060 587 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-212ENST00000555110 HOMEZQ8IX15 550 aa6.29□□□□□ -1.4
PRKCH-212ENST00000555110 MYT1LQ9UL68 1186 aa6.29□□□□□ -1.4
PRKCH-212ENST00000555110 CEP170BQ9Y4F5 1589 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-212ENST00000555110 ZMYM3Q14202 1370 aa6.29□□□□□ -1.4
PRKCH-212ENST00000555110 MYO3AQ8NEV4 1616 aa6.28□□□□□ -1.4
PRKCH-212ENST00000555110 PTPRKQ15262 1439 aa6.28□□□□□ -1.4
PRKCH-212ENST00000555110 TOM1O60784 492 aa6.28□□□□□ -1.4
PRKCH-212ENST00000555110 HSPA1LP34931 641 aa6.28□□□□□ -1.4
PRKCH-212ENST00000555110 GTF3C3Q9Y5Q9 886 aa6.28□□□□□ -1.4
PRKCH-212ENST00000555110 NCKAP5LQ9HCH0 1330 aa6.27□□□□□ -1.41
PRKCH-212ENST00000555110 PLXNC1O60486 1568 aa6.27□□□□□ -1.41
PRKCH-212ENST00000555110 PREX2Q70Z35 1606 aa6.27□□□□□ -1.41
PRKCH-212ENST00000555110 A2ML1A8K2U0 1454 aa6.27□□□□□ -1.41
PRKCH-212ENST00000555110 CCDC18Q5T9S5 1454 aa6.27□□□□□ -1.41
PRKCH-212ENST00000555110 ITSN2Q9NZM3 1697 aa6.26□□□□□ -1.41
PRKCH-212ENST00000555110 KIAA1107Q9UPP5 1409 aa6.26□□□□□ -1.41
PRKCH-212ENST00000555110 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
PRKCH-212ENST00000555110 SAMD9LQ8IVG5 1584 aa6.26□□□□□ -1.41
PRKCH-212ENST00000555110 KIDINS220Q9ULH0 1771 aa6.26□□□□□ -1.41
PRKCH-212ENST00000555110 FAM135AQ9P2D6 1515 aa6.25□□□□□ -1.41
PRKCH-212ENST00000555110 KDM2AQ9Y2K7 1162 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms