RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-206ENST00000554943 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
PPP4R3A-206ENST00000554943 CAMSAP2Q08AD1 1489 aa18.27■□□□□ 0.52
PPP4R3A-206ENST00000554943 ITGAEP38570 1179 aa18.27■□□□□ 0.52
PPP4R3A-206ENST00000554943 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.51
PPP4R3A-206ENST00000554943 PZPP20742 1482 aa18.26■□□□□ 0.51
PPP4R3A-206ENST00000554943 RPRD2Q5VT52 1461 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-206ENST00000554943 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-206ENST00000554943 CHD1O14646 1710 aa18.24■□□□□ 0.51
PPP4R3A-206ENST00000554943 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
PPP4R3A-206ENST00000554943 PLB1Q6P1J6 1458 aa18.24■□□□□ 0.51
PPP4R3A-206ENST00000554943 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
PPP4R3A-206ENST00000554943 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
PPP4R3A-206ENST00000554943 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
PPP4R3A-206ENST00000554943 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
PPP4R3A-206ENST00000554943 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
PPP4R3A-206ENST00000554943 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
PPP4R3A-206ENST00000554943 ATP10BO94823 1461 aa18.17■□□□□ 0.5
PPP4R3A-206ENST00000554943 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PPP4R3A-206ENST00000554943 PTPRGP23470 1445 aa18.15■□□□□ 0.5
PPP4R3A-206ENST00000554943 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
PPP4R3A-206ENST00000554943 UNC13BO14795 1591 aa18.11■□□□□ 0.49
PPP4R3A-206ENST00000554943 CARMIL2Q6F5E8 1435 aa18.11■□□□□ 0.49
PPP4R3A-206ENST00000554943 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
PPP4R3A-206ENST00000554943 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
PPP4R3A-206ENST00000554943 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
PPP4R3A-206ENST00000554943 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
PPP4R3A-206ENST00000554943 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
PPP4R3A-206ENST00000554943 KDM5CP41229 1560 aa18.08■□□□□ 0.49
PPP4R3A-206ENST00000554943 E9PCH4 1651 aa18.06■□□□□ 0.48
PPP4R3A-206ENST00000554943 MPHOSPH9Q99550 1183 aa18.06■□□□□ 0.48
PPP4R3A-206ENST00000554943 BCORL1Q5H9F3 1711 aa18.06■□□□□ 0.48
PPP4R3A-206ENST00000554943 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
PPP4R3A-206ENST00000554943 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
PPP4R3A-206ENST00000554943 TTC37Q6PGP7 1564 aa18.03■□□□□ 0.48
PPP4R3A-206ENST00000554943 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
PPP4R3A-206ENST00000554943 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
PPP4R3A-206ENST00000554943 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-206ENST00000554943 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
PPP4R3A-206ENST00000554943 LAMC1P11047 1609 aa18.02■□□□□ 0.48
PPP4R3A-206ENST00000554943 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
PPP4R3A-206ENST00000554943 JPH4Q96JJ6 628 aa18■□□□□ 0.47
PPP4R3A-206ENST00000554943 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
PPP4R3A-206ENST00000554943 RRP7BPQ9NSQ0 103 aa18■□□□□ 0.47
PPP4R3A-206ENST00000554943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
PPP4R3A-206ENST00000554943 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
PPP4R3A-206ENST00000554943 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
PPP4R3A-206ENST00000554943 WASHC2AQ641Q2 1341 aa17.97■□□□□ 0.47
PPP4R3A-206ENST00000554943 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
PPP4R3A-206ENST00000554943 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
PPP4R3A-206ENST00000554943 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
PPP4R3A-206ENST00000554943 TRPM1Q7Z4N2 1603 aa17.95■□□□□ 0.46
PPP4R3A-206ENST00000554943 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
PPP4R3A-206ENST00000554943 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
PPP4R3A-206ENST00000554943 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
PPP4R3A-206ENST00000554943 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
PPP4R3A-206ENST00000554943 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
PPP4R3A-206ENST00000554943 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
PPP4R3A-206ENST00000554943 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
PPP4R3A-206ENST00000554943 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
PPP4R3A-206ENST00000554943 ANKRD50Q9ULJ7 1429 aa17.91■□□□□ 0.46
PPP4R3A-206ENST00000554943 ATP10AO60312 1499 aa17.91■□□□□ 0.46
PPP4R3A-206ENST00000554943 CCDC141Q6ZP82 1450 aa17.91■□□□□ 0.46
PPP4R3A-206ENST00000554943 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
PPP4R3A-206ENST00000554943 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
PPP4R3A-206ENST00000554943 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
PPP4R3A-206ENST00000554943 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
PPP4R3A-206ENST00000554943 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
PPP4R3A-206ENST00000554943 RNF17Q9BXT8 1623 aaKnown RBP17.89■□□□□ 0.45
PPP4R3A-206ENST00000554943 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
PPP4R3A-206ENST00000554943 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
PPP4R3A-206ENST00000554943 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-206ENST00000554943 ABCC1P33527 1531 aa17.85■□□□□ 0.45
PPP4R3A-206ENST00000554943 SYCP2Q9BX26 1530 aa17.85■□□□□ 0.45
PPP4R3A-206ENST00000554943 NEURL4Q96JN8 1562 aa17.84■□□□□ 0.45
PPP4R3A-206ENST00000554943 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
PPP4R3A-206ENST00000554943 DHX29Q7Z478 1369 aaKnown RBP17.83■□□□□ 0.45
PPP4R3A-206ENST00000554943 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
PPP4R3A-206ENST00000554943 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
PPP4R3A-206ENST00000554943 VWDEQ8N2E2 1590 aa17.81■□□□□ 0.44
PPP4R3A-206ENST00000554943 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
PPP4R3A-206ENST00000554943 PLEKHH2Q8IVE3 1493 aa17.79■□□□□ 0.44
PPP4R3A-206ENST00000554943 DUOX2Q9NRD8 1548 aa17.79■□□□□ 0.44
PPP4R3A-206ENST00000554943 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
PPP4R3A-206ENST00000554943 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
PPP4R3A-206ENST00000554943 CEP152O94986 1710 aa17.78■□□□□ 0.44
PPP4R3A-206ENST00000554943 FOXD1Q16676 465 aa17.78■□□□□ 0.44
PPP4R3A-206ENST00000554943 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
PPP4R3A-206ENST00000554943 EIF4G2P78344 907 aaKnown RBP eCLIP17.77■□□□□ 0.44
PPP4R3A-206ENST00000554943 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
PPP4R3A-206ENST00000554943 ANP32CO43423 234 aa17.76■□□□□ 0.43
PPP4R3A-206ENST00000554943 KIF15Q9NS87 1388 aa17.75■□□□□ 0.43
PPP4R3A-206ENST00000554943 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 SPHKAPQ2M3C7 1700 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 EIF2AK4Q9P2K8 1649 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 KIF7Q2M1P5 1343 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 PLCH2O75038 1416 aa17.74■□□□□ 0.43
PPP4R3A-206ENST00000554943 ZFYVE16Q7Z3T8 1539 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms