RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
LRP1-207ENST00000554174 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
LRP1-207ENST00000554174 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
LRP1-207ENST00000554174 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
LRP1-207ENST00000554174 KIF14Q15058 1648 aa17.42■□□□□ 0.38
LRP1-207ENST00000554174 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
LRP1-207ENST00000554174 ROCK1Q13464 1354 aa17.41■□□□□ 0.38
LRP1-207ENST00000554174 FOXD1Q16676 465 aa17.4■□□□□ 0.38
LRP1-207ENST00000554174 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
LRP1-207ENST00000554174 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
LRP1-207ENST00000554174 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
LRP1-207ENST00000554174 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
LRP1-207ENST00000554174 ABCA8O94911 1581 aa17.36■□□□□ 0.37
LRP1-207ENST00000554174 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
LRP1-207ENST00000554174 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
LRP1-207ENST00000554174 ATP10BO94823 1461 aa17.33■□□□□ 0.36
LRP1-207ENST00000554174 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
LRP1-207ENST00000554174 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
LRP1-207ENST00000554174 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
LRP1-207ENST00000554174 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
LRP1-207ENST00000554174 CDC42BPAQ5VT25 1732 aa17.29■□□□□ 0.36
LRP1-207ENST00000554174 ABCC10Q5T3U5 1492 aa17.28■□□□□ 0.36
LRP1-207ENST00000554174 CROCC2H7BZ55 1655 aa17.28■□□□□ 0.36
LRP1-207ENST00000554174 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
LRP1-207ENST00000554174 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.35
LRP1-207ENST00000554174 CHD1O14646 1710 aa17.26■□□□□ 0.35
LRP1-207ENST00000554174 PZPP20742 1482 aa17.25■□□□□ 0.35
LRP1-207ENST00000554174 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
LRP1-207ENST00000554174 PTPRGP23470 1445 aa17.25■□□□□ 0.35
LRP1-207ENST00000554174 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
LRP1-207ENST00000554174 ADGRL2O95490 1459 aa17.24■□□□□ 0.35
LRP1-207ENST00000554174 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
LRP1-207ENST00000554174 ANP32CO43423 234 aa17.22■□□□□ 0.35
LRP1-207ENST00000554174 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
LRP1-207ENST00000554174 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
LRP1-207ENST00000554174 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
LRP1-207ENST00000554174 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
LRP1-207ENST00000554174 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
LRP1-207ENST00000554174 ANKRD50Q9ULJ7 1429 aa17.18■□□□□ 0.34
LRP1-207ENST00000554174 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
LRP1-207ENST00000554174 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
LRP1-207ENST00000554174 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRP1-207ENST00000554174 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
LRP1-207ENST00000554174 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
LRP1-207ENST00000554174 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
LRP1-207ENST00000554174 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
LRP1-207ENST00000554174 PKD2Q13563 968 aa17.15■□□□□ 0.34
LRP1-207ENST00000554174 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
LRP1-207ENST00000554174 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
LRP1-207ENST00000554174 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.33
LRP1-207ENST00000554174 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
LRP1-207ENST00000554174 SAMD9LQ8IVG5 1584 aa17.12■□□□□ 0.33
LRP1-207ENST00000554174 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
LRP1-207ENST00000554174 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
LRP1-207ENST00000554174 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
LRP1-207ENST00000554174 NUP155O75694 1391 aa17.1■□□□□ 0.33
LRP1-207ENST00000554174 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
LRP1-207ENST00000554174 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
LRP1-207ENST00000554174 KIF15Q9NS87 1388 aa17.08■□□□□ 0.33
LRP1-207ENST00000554174 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
LRP1-207ENST00000554174 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
LRP1-207ENST00000554174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
LRP1-207ENST00000554174 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
LRP1-207ENST00000554174 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
LRP1-207ENST00000554174 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
LRP1-207ENST00000554174 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
LRP1-207ENST00000554174 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
LRP1-207ENST00000554174 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
LRP1-207ENST00000554174 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
LRP1-207ENST00000554174 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
LRP1-207ENST00000554174 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
LRP1-207ENST00000554174 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
LRP1-207ENST00000554174 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
LRP1-207ENST00000554174 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
LRP1-207ENST00000554174 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
LRP1-207ENST00000554174 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
LRP1-207ENST00000554174 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
LRP1-207ENST00000554174 USP47Q96K76 1375 aa16.96■□□□□ 0.31
LRP1-207ENST00000554174 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
LRP1-207ENST00000554174 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
LRP1-207ENST00000554174 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
LRP1-207ENST00000554174 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
LRP1-207ENST00000554174 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
LRP1-207ENST00000554174 KDM5CP41229 1560 aa16.94■□□□□ 0.3
LRP1-207ENST00000554174 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
LRP1-207ENST00000554174 FKBP8Q14318 412 aa16.93■□□□□ 0.3
LRP1-207ENST00000554174 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
LRP1-207ENST00000554174 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
LRP1-207ENST00000554174 BCANQ96GW7 911 aa16.91■□□□□ 0.3
LRP1-207ENST00000554174 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
LRP1-207ENST00000554174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.35e-8■□□□□ 9
LRP1-207ENST00000554174 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
LRP1-207ENST00000554174 PLCH2O75038 1416 aa16.9■□□□□ 0.3
LRP1-207ENST00000554174 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
LRP1-207ENST00000554174 UNC13BO14795 1591 aa16.9■□□□□ 0.3
LRP1-207ENST00000554174 PLXNC1O60486 1568 aa16.89■□□□□ 0.29
LRP1-207ENST00000554174 PLA2R1Q13018 1463 aa16.88■□□□□ 0.29
LRP1-207ENST00000554174 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
LRP1-207ENST00000554174 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
LRP1-207ENST00000554174 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms