RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 KDM5BQ9UGL1 1544 aa9.05□□□□□ -0.96
RPGRIP1-204ENST00000553927 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
RPGRIP1-204ENST00000553927 FRAT2O75474 233 aaPredicted RBP9.05□□□□□ -0.96
RPGRIP1-204ENST00000553927 PLCB2Q00722 1185 aa9.05□□□□□ -0.96
RPGRIP1-204ENST00000553927 NCAPD3P42695 1498 aa9.04□□□□□ -0.96
RPGRIP1-204ENST00000553927 TCERG1O14776 1098 aaKnown RBP9.04□□□□□ -0.96
RPGRIP1-204ENST00000553927 NCOA2Q15596 1464 aa9.04□□□□□ -0.96
RPGRIP1-204ENST00000553927 UACAQ9BZF9 1416 aa9.04□□□□□ -0.96
RPGRIP1-204ENST00000553927 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
RPGRIP1-204ENST00000553927 RRP1P56182 461 aaKnown RBP9.03□□□□□ -0.96
RPGRIP1-204ENST00000553927 NBPF8Q3BBV2 869 aa9.03□□□□□ -0.96
RPGRIP1-204ENST00000553927 FHOD3Q2V2M9 1422 aa9.03□□□□□ -0.96
RPGRIP1-204ENST00000553927 RNF123Q5XPI4 1314 aa9.03□□□□□ -0.96
RPGRIP1-204ENST00000553927 TMC1Q8TDI8 760 aa9.02□□□□□ -0.97
RPGRIP1-204ENST00000553927 PCF11O94913 1555 aaKnown RBP9.01□□□□□ -0.97
RPGRIP1-204ENST00000553927 NCOA1Q15788 1441 aa9.01□□□□□ -0.97
RPGRIP1-204ENST00000553927 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
RPGRIP1-204ENST00000553927 RSPH6AQ9H0K4 717 aa9.01□□□□□ -0.97
RPGRIP1-204ENST00000553927 CUX1P39880 1505 aa9□□□□□ -0.97
RPGRIP1-204ENST00000553927 DNAJC5BQ9UF47 199 aa9□□□□□ -0.97
RPGRIP1-204ENST00000553927 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
RPGRIP1-204ENST00000553927 ARID4BQ4LE39 1312 aaPredicted RBP8.99□□□□□ -0.97
RPGRIP1-204ENST00000553927 FGD6Q6ZV73 1430 aa8.99□□□□□ -0.97
RPGRIP1-204ENST00000553927 NAIPQ13075 1403 aa8.99□□□□□ -0.97
RPGRIP1-204ENST00000553927 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 RRAGDQ9NQL2 400 aaPredicted RBP8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 HFM1A2PYH4 1435 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 BIVM-ERCC5R4GMW8 1640 aa8.98□□□□□ -0.97
RPGRIP1-204ENST00000553927 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 ATAD2BQ9ULI0 1458 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 ARID3CA6NKF2 412 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 FAM43AQ8N2R8 423 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 NAP1L5Q96NT1 182 aaPredicted RBP8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 POGKQ9P215 609 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
RPGRIP1-204ENST00000553927 RGS3P49796 1198 aa8.96□□□□□ -0.98
RPGRIP1-204ENST00000553927 PODXL2Q9NZ53 605 aa8.96□□□□□ -0.98
RPGRIP1-204ENST00000553927 IGF1RP08069 1367 aa8.96□□□□□ -0.98
RPGRIP1-204ENST00000553927 FMN1Q68DA7 1419 aa8.96□□□□□ -0.98
RPGRIP1-204ENST00000553927 MAP3K1Q13233 1512 aa8.95□□□□□ -0.98
RPGRIP1-204ENST00000553927 MPHOSPH9Q99550 1183 aa8.95□□□□□ -0.98
RPGRIP1-204ENST00000553927 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
RPGRIP1-204ENST00000553927 C20orf194Q5TEA3 1177 aa8.95□□□□□ -0.98
RPGRIP1-204ENST00000553927 MS4A1P11836 297 aa8.94□□□□□ -0.98
RPGRIP1-204ENST00000553927 DHX29Q7Z478 1369 aaKnown RBP8.94□□□□□ -0.98
RPGRIP1-204ENST00000553927 DENND4BO75064 1496 aaPredicted RBP8.94□□□□□ -0.98
RPGRIP1-204ENST00000553927 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
RPGRIP1-204ENST00000553927 SLKQ9H2G2 1235 aaPredicted RBP8.93□□□□□ -0.98
RPGRIP1-204ENST00000553927 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
RPGRIP1-204ENST00000553927 GLIPR1L2Q4G1C9 344 aa8.92□□□□□ -0.98
RPGRIP1-204ENST00000553927 KDM6BO15054 1643 aa8.91□□□□□ -0.98
RPGRIP1-204ENST00000553927 GZF1Q9H116 711 aaPredicted RBP8.91□□□□□ -0.98
RPGRIP1-204ENST00000553927 NPM3O75607 178 aaKnown RBP8.91□□□□□ -0.98
RPGRIP1-204ENST00000553927 HOMEZQ8IX15 550 aa8.9□□□□□ -0.98
RPGRIP1-204ENST00000553927 HSP90AA2PQ14568 343 aaPredicted RBP8.89□□□□□ -0.99
RPGRIP1-204ENST00000553927 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
RPGRIP1-204ENST00000553927 C8orf34Q49A92 452 aa8.89□□□□□ -0.99
RPGRIP1-204ENST00000553927 CFTRP13569 1480 aa8.89□□□□□ -0.99
RPGRIP1-204ENST00000553927 PANK2Q9BZ23 570 aa8.88□□□□□ -0.99
RPGRIP1-204ENST00000553927 USP47Q96K76 1375 aa8.88□□□□□ -0.99
RPGRIP1-204ENST00000553927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.88□□□□□ -0.99
RPGRIP1-204ENST00000553927 PNNQ9H307 717 aaKnown RBP8.87□□□□□ -0.99
RPGRIP1-204ENST00000553927 SPATA31E1Q6ZUB1 1445 aa8.87□□□□□ -0.99
RPGRIP1-204ENST00000553927 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
RPGRIP1-204ENST00000553927 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
RPGRIP1-204ENST00000553927 FYCO1Q9BQS8 1478 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 KDM2AQ9Y2K7 1162 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 MYOM3Q5VTT5 1437 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 CASKIN1Q8WXD9 1431 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 FBLN2P98095 1184 aa8.86□□□□□ -0.99
RPGRIP1-204ENST00000553927 BCORL1Q5H9F3 1711 aa8.84□□□□□ -0.99
RPGRIP1-204ENST00000553927 CC2D1BQ5T0F9 858 aaKnown RBP8.84□□□□□ -0.99
RPGRIP1-204ENST00000553927 FGD5Q6ZNL6 1462 aa8.84□□□□□ -0.99
RPGRIP1-204ENST00000553927 SEC24BO95487 1268 aa8.83□□□□□ -1
RPGRIP1-204ENST00000553927 MYBBP1AQ9BQG0 1328 aaKnown RBP8.83□□□□□ -1
RPGRIP1-204ENST00000553927 KTN1Q86UP2 1357 aaKnown RBP8.83□□□□□ -1
RPGRIP1-204ENST00000553927 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
RPGRIP1-204ENST00000553927 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
RPGRIP1-204ENST00000553927 XRCC6P12956 609 aaKnown RBP eCLIP8.83□□□□□ -1
RPGRIP1-204ENST00000553927 ANKRD30BQ9BXX2 1392 aa8.82□□□□□ -1
RPGRIP1-204ENST00000553927 ST20-MTHFSA0A0A6YYL1 179 aa8.82□□□□□ -1
RPGRIP1-204ENST00000553927 KDM2BQ8NHM5 1336 aa8.82□□□□□ -1
RPGRIP1-204ENST00000553927 CARD11Q9BXL7 1154 aa8.82□□□□□ -1
RPGRIP1-204ENST00000553927 A0A0U1RQG5 324 aaPredicted RBP8.81□□□□□ -1
RPGRIP1-204ENST00000553927 ARID3AQ99856 593 aa8.81□□□□□ -1
RPGRIP1-204ENST00000553927 RPRD2Q5VT52 1461 aaKnown RBP8.81□□□□□ -1
RPGRIP1-204ENST00000553927 KIF15Q9NS87 1388 aa8.81□□□□□ -1
RPGRIP1-204ENST00000553927 CENPQQ7L2Z9 268 aaPredicted RBP8.81□□□□□ -1
RPGRIP1-204ENST00000553927 HECW1Q76N89 1606 aa8.81□□□□□ -1
RPGRIP1-204ENST00000553927 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
RPGRIP1-204ENST00000553927 L1TD1Q5T7N2 865 aaKnown RBP8.8□□□□□ -1
RPGRIP1-204ENST00000553927 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
RPGRIP1-204ENST00000553927 GOLGA6L3A6NEY3 463 aa8.79□□□□□ -1
RPGRIP1-204ENST00000553927 BRD4O60885 1362 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms