RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 CFAP43Q8NDM7 1665 aa7.56□□□□□ -1.2
PFDN5-219ENST00000553171 ADAMTS12P58397 1594 aa7.55□□□□□ -1.2
PFDN5-219ENST00000553171 FHAD1B1AJZ9 1412 aa7.55□□□□□ -1.2
PFDN5-219ENST00000553171 TPRNQ4KMQ1 711 aa7.55□□□□□ -1.2
PFDN5-219ENST00000553171 TOP2AP11388 1531 aaKnown RBP7.55□□□□□ -1.2
PFDN5-219ENST00000553171 ARAP3Q8WWN8 1544 aa7.55□□□□□ -1.2
PFDN5-219ENST00000553171 ABCA5Q8WWZ7 1642 aa7.54□□□□□ -1.2
PFDN5-219ENST00000553171 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
PFDN5-219ENST00000553171 GTF3C3Q9Y5Q9 886 aa7.54□□□□□ -1.2
PFDN5-219ENST00000553171 PTPRGP23470 1445 aa7.53□□□□□ -1.2
PFDN5-219ENST00000553171 TOM1O60784 492 aa7.53□□□□□ -1.2
PFDN5-219ENST00000553171 PIP4K2BP78356 416 aa7.53□□□□□ -1.2
PFDN5-219ENST00000553171 ABCA10Q8WWZ4 1543 aa7.52□□□□□ -1.21
PFDN5-219ENST00000553171 CD109Q6YHK3 1445 aa7.52□□□□□ -1.21
PFDN5-219ENST00000553171 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
PFDN5-219ENST00000553171 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
PFDN5-219ENST00000553171 PREX1Q8TCU6 1659 aa7.51□□□□□ -1.21
PFDN5-219ENST00000553171 UHRF1BP1LA0JNW5 1464 aa7.5□□□□□ -1.21
PFDN5-219ENST00000553171 RBM42Q9BTD8 480 aaKnown RBP7.5□□□□□ -1.21
PFDN5-219ENST00000553171 NPM3O75607 178 aaKnown RBP7.49□□□□□ -1.21
PFDN5-219ENST00000553171 CUL7Q14999 1698 aa7.47□□□□□ -1.21
PFDN5-219ENST00000553171 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
PFDN5-219ENST00000553171 SETD1AO15047 1707 aaKnown RBP7.47□□□□□ -1.21
PFDN5-219ENST00000553171 UHRF1BP1Q6BDS2 1440 aa7.47□□□□□ -1.21
PFDN5-219ENST00000553171 SETD1BQ9UPS6 1966 aaKnown RBP7.47□□□□□ -1.21
PFDN5-219ENST00000553171 RAPGEF3O95398 923 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 CENPBP07199 599 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-219ENST00000553171 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
PFDN5-219ENST00000553171 C14orf37Q86TY3 774 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 ZNF219Q9P2Y4 722 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-219ENST00000553171 CUX1P39880 1505 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 RUSC2Q8N2Y8 1516 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 TTC37Q6PGP7 1564 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 PHLDB1Q86UU1 1377 aa7.46□□□□□ -1.22
PFDN5-219ENST00000553171 POGZQ7Z3K3 1410 aa7.45□□□□□ -1.22
PFDN5-219ENST00000553171 RBM33Q96EV2 1170 aaKnown RBP7.45□□□□□ -1.22
PFDN5-219ENST00000553171 NCOA1Q15788 1441 aa7.44□□□□□ -1.22
PFDN5-219ENST00000553171 UACAQ9BZF9 1416 aa7.44□□□□□ -1.22
PFDN5-219ENST00000553171 NEFLP07196 543 aa7.43□□□□□ -1.22
PFDN5-219ENST00000553171 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
PFDN5-219ENST00000553171 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
PFDN5-219ENST00000553171 WDR7Q9Y4E6 1490 aa7.43□□□□□ -1.22
PFDN5-219ENST00000553171 SLC34A2O95436 690 aa7.4□□□□□ -1.22
PFDN5-219ENST00000553171 ZRANB1Q9UGI0 708 aa7.4□□□□□ -1.22
PFDN5-219ENST00000553171 FANCAO15360 1455 aa7.39□□□□□ -1.23
PFDN5-219ENST00000553171 ALKQ9UM73 1620 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 ERICH3Q5RHP9 1530 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 PTPRKQ15262 1439 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 KCNH8Q96L42 1107 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 PCDH10Q9P2E7 1040 aa7.38□□□□□ -1.23
PFDN5-219ENST00000553171 MLECQ14165 292 aa7.37□□□□□ -1.23
PFDN5-219ENST00000553171 ZCCHC11Q5TAX3 1644 aaKnown RBP7.37□□□□□ -1.23
PFDN5-219ENST00000553171 FER1L4A9Z1Z3 1794 aa7.36□□□□□ -1.23
PFDN5-219ENST00000553171 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
PFDN5-219ENST00000553171 CDK11AQ9UQ88 783 aaPredicted RBP7.36□□□□□ -1.23
PFDN5-219ENST00000553171 KIAA0556O60303 1618 aa7.36□□□□□ -1.23
PFDN5-219ENST00000553171 SETBP1Q9Y6X0 1596 aa7.36□□□□□ -1.23
PFDN5-219ENST00000553171 ARHGEF40Q8TER5 1519 aa7.36□□□□□ -1.23
PFDN5-219ENST00000553171 NCKAP5LQ9HCH0 1330 aa7.35□□□□□ -1.23
PFDN5-219ENST00000553171 FRMPD1Q5SYB0 1578 aa7.35□□□□□ -1.23
PFDN5-219ENST00000553171 PDE4CQ08493 712 aa7.35□□□□□ -1.23
PFDN5-219ENST00000553171 TMEM132AQ24JP5 1023 aa7.35□□□□□ -1.23
PFDN5-219ENST00000553171 PKNOX2Q96KN3 472 aa7.35□□□□□ -1.23
PFDN5-219ENST00000553171 ARHGEF12Q9NZN5 1544 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 HAX1O00165 279 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 PKD2Q13563 968 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 CARMIL2Q6F5E8 1435 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 AKNAQ7Z591 1439 aa7.34□□□□□ -1.23
PFDN5-219ENST00000553171 YY1P25490 414 aa7.33□□□□□ -1.24
PFDN5-219ENST00000553171 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
PFDN5-219ENST00000553171 HRCP23327 699 aa7.32□□□□□ -1.24
PFDN5-219ENST00000553171 TAF7LQ5H9L4 462 aa7.32□□□□□ -1.24
PFDN5-219ENST00000553171 CPS1P31327 1500 aa7.32□□□□□ -1.24
PFDN5-219ENST00000553171 NEO1Q92859 1461 aa7.31□□□□□ -1.24
PFDN5-219ENST00000553171 SENP3-EIF4A1A0A087X0R7 540 aa7.31□□□□□ -1.24
PFDN5-219ENST00000553171 EVX2Q03828 476 aa7.31□□□□□ -1.24
PFDN5-219ENST00000553171 TRIM52Q96A61 297 aa7.31□□□□□ -1.24
PFDN5-219ENST00000553171 CAMSAP1Q5T5Y3 1602 aa7.3□□□□□ -1.24
PFDN5-219ENST00000553171 TRAPPC8Q9Y2L5 1435 aa7.3□□□□□ -1.24
PFDN5-219ENST00000553171 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
PFDN5-219ENST00000553171 HAP1P54257 671 aaPredicted RBP7.29□□□□□ -1.24
PFDN5-219ENST00000553171 WRNQ14191 1432 aaPredicted RBP eCLIP7.28□□□□□ -1.24
PFDN5-219ENST00000553171 FHOD3Q2V2M9 1422 aa7.28□□□□□ -1.24
PFDN5-219ENST00000553171 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
PFDN5-219ENST00000553171 HMGB1P09429 215 aaKnown RBP7.27□□□□□ -1.25
PFDN5-219ENST00000553171 CDK12Q9NYV4 1490 aaPredicted RBP7.27□□□□□ -1.25
PFDN5-219ENST00000553171 PLA2R1Q13018 1463 aa7.26□□□□□ -1.25
PFDN5-219ENST00000553171 TCOF1Q13428 1488 aaKnown RBP7.26□□□□□ -1.25
PFDN5-219ENST00000553171 SHANK2Q9UPX8 1470 aa7.26□□□□□ -1.25
PFDN5-219ENST00000553171 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
PFDN5-219ENST00000553171 CHMP4AQ9BY43 222 aa7.26□□□□□ -1.25
PFDN5-219ENST00000553171 PLSCR2Q9NRY7 297 aa7.26□□□□□ -1.25
PFDN5-219ENST00000553171 LOC105371045A0A1W2PR82 267 aa7.25□□□□□ -1.25
PFDN5-219ENST00000553171 RXRBP28702 533 aa7.25□□□□□ -1.25
PFDN5-219ENST00000553171 ZNF772Q68DY9 489 aaPredicted RBP7.25□□□□□ -1.25
PFDN5-219ENST00000553171 LRP5O75197 1615 aa7.25□□□□□ -1.25
PFDN5-219ENST00000553171 DENND4BO75064 1496 aaPredicted RBP7.24□□□□□ -1.25
PFDN5-219ENST00000553171 MAGI2Q86UL8 1455 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms