RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 ABCA8O94911 1581 aa10.43□□□□□ -0.74
BEST3-212ENST00000553096 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
BEST3-212ENST00000553096 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
BEST3-212ENST00000553096 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 RIMBP3CA6NJZ7 1639 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 RIMBP3BA6NNM3 1639 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 RIMBP3Q9UFD9 1639 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 ITSN2Q9NZM3 1697 aa10.42□□□□□ -0.74
BEST3-212ENST00000553096 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
BEST3-212ENST00000553096 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
BEST3-212ENST00000553096 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
BEST3-212ENST00000553096 SIN3AQ96ST3 1273 aa10.4□□□□□ -0.74
BEST3-212ENST00000553096 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
BEST3-212ENST00000553096 SHROOM2Q13796 1616 aa10.4□□□□□ -0.74
BEST3-212ENST00000553096 UACAQ9BZF9 1416 aa10.39□□□□□ -0.75
BEST3-212ENST00000553096 PRG4Q92954 1404 aaPredicted RBP10.39□□□□□ -0.75
BEST3-212ENST00000553096 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
BEST3-212ENST00000553096 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
BEST3-212ENST00000553096 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
BEST3-212ENST00000553096 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
BEST3-212ENST00000553096 TROQ12816 1431 aaPredicted RBP10.37□□□□□ -0.75
BEST3-212ENST00000553096 DAPK1P53355 1430 aa10.37□□□□□ -0.75
BEST3-212ENST00000553096 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
BEST3-212ENST00000553096 TIMELESSQ9UNS1 1208 aa10.37□□□□□ -0.75
BEST3-212ENST00000553096 CARMIL2Q6F5E8 1435 aa10.36□□□□□ -0.75
BEST3-212ENST00000553096 CAMSAP2Q08AD1 1489 aa10.35□□□□□ -0.75
BEST3-212ENST00000553096 ERCC6L2Q5T890 1561 aa10.35□□□□□ -0.75
BEST3-212ENST00000553096 ABCC5O15440 1437 aa10.35□□□□□ -0.75
BEST3-212ENST00000553096 PKNOX2Q96KN3 472 aa10.34□□□□□ -0.75
BEST3-212ENST00000553096 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
BEST3-212ENST00000553096 GPATCH8Q9UKJ3 1502 aaKnown RBP10.34□□□□□ -0.75
BEST3-212ENST00000553096 CHIC2Q9UKJ5 165 aa10.34□□□□□ -0.75
BEST3-212ENST00000553096 ATP10BO94823 1461 aa10.34□□□□□ -0.75
BEST3-212ENST00000553096 RRP7BPQ9NSQ0 103 aa10.34□□□□□ -0.75
BEST3-212ENST00000553096 ABCC10Q5T3U5 1492 aa10.33□□□□□ -0.76
BEST3-212ENST00000553096 AEBP2Q6ZN18 517 aaPredicted RBP10.33□□□□□ -0.76
BEST3-212ENST00000553096 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
BEST3-212ENST00000553096 NEFLP07196 543 aa10.32□□□□□ -0.76
BEST3-212ENST00000553096 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
BEST3-212ENST00000553096 PLPPR3Q6T4P5 718 aa10.3□□□□□ -0.76
BEST3-212ENST00000553096 ROCK1Q13464 1354 aa10.3□□□□□ -0.76
BEST3-212ENST00000553096 PREX2Q70Z35 1606 aa10.29□□□□□ -0.76
BEST3-212ENST00000553096 PPP1R15AO75807 674 aaPredicted RBP10.27□□□□□ -0.76
BEST3-212ENST00000553096 FKBP8Q14318 412 aa10.27□□□□□ -0.76
BEST3-212ENST00000553096 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
BEST3-212ENST00000553096 ADGRL2O95490 1459 aa10.27□□□□□ -0.77
BEST3-212ENST00000553096 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.77
BEST3-212ENST00000553096 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
BEST3-212ENST00000553096 PTPRGP23470 1445 aa10.25□□□□□ -0.77
BEST3-212ENST00000553096 PZPP20742 1482 aa10.25□□□□□ -0.77
BEST3-212ENST00000553096 ANP32CO43423 234 aa10.24□□□□□ -0.77
BEST3-212ENST00000553096 ZCCHC11Q5TAX3 1644 aaKnown RBP10.24□□□□□ -0.77
BEST3-212ENST00000553096 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
BEST3-212ENST00000553096 TONSLQ96HA7 1378 aa10.24□□□□□ -0.77
BEST3-212ENST00000553096 NCOA1Q15788 1441 aa10.24□□□□□ -0.77
BEST3-212ENST00000553096 ABCC2Q92887 1545 aa10.24□□□□□ -0.77
BEST3-212ENST00000553096 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
BEST3-212ENST00000553096 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
BEST3-212ENST00000553096 ARHGEF5Q12774 1597 aa10.23□□□□□ -0.77
BEST3-212ENST00000553096 MYO5CQ9NQX4 1742 aa10.23□□□□□ -0.77
BEST3-212ENST00000553096 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
BEST3-212ENST00000553096 CFDP1Q9UEE9 299 aaPredicted RBP10.23□□□□□ -0.77
BEST3-212ENST00000553096 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
BEST3-212ENST00000553096 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
BEST3-212ENST00000553096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.22□□□□□ -0.77
BEST3-212ENST00000553096 FOXD1Q16676 465 aa10.22□□□□□ -0.77
BEST3-212ENST00000553096 MPHOSPH9Q99550 1183 aa10.22□□□□□ -0.77
BEST3-212ENST00000553096 BCANQ96GW7 911 aa10.22□□□□□ -0.77
BEST3-212ENST00000553096 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.77
BEST3-212ENST00000553096 TRIM52Q96A61 297 aa10.21□□□□□ -0.78
BEST3-212ENST00000553096 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.78
BEST3-212ENST00000553096 MBD5Q9P267 1494 aa10.2□□□□□ -0.78
BEST3-212ENST00000553096 ANKRD30BQ9BXX2 1392 aa10.2□□□□□ -0.78
BEST3-212ENST00000553096 RBM19Q9Y4C8 960 aaKnown RBP10.2□□□□□ -0.78
BEST3-212ENST00000553096 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
BEST3-212ENST00000553096 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
BEST3-212ENST00000553096 RPRD2Q5VT52 1461 aaKnown RBP10.19□□□□□ -0.78
BEST3-212ENST00000553096 PLEKHD1A6NEE1 506 aa10.19□□□□□ -0.78
BEST3-212ENST00000553096 ARXQ96QS3 562 aa10.19□□□□□ -0.78
BEST3-212ENST00000553096 C9orf84Q5VXU9 1444 aa10.19□□□□□ -0.78
BEST3-212ENST00000553096 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
BEST3-212ENST00000553096 SYCP2Q9BX26 1530 aa10.18□□□□□ -0.78
BEST3-212ENST00000553096 KDM5DQ9BY66 1539 aa10.18□□□□□ -0.78
BEST3-212ENST00000553096 MAST1Q9Y2H9 1570 aa10.17□□□□□ -0.78
BEST3-212ENST00000553096 ANKRD30AQ9BXX3 1397 aa10.15□□□□□ -0.78
BEST3-212ENST00000553096 ERICH6BQ5W0A0 696 aa10.15□□□□□ -0.78
BEST3-212ENST00000553096 ANKRD50Q9ULJ7 1429 aa10.15□□□□□ -0.78
BEST3-212ENST00000553096 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
BEST3-212ENST00000553096 UHRF1BP1LA0JNW5 1464 aa10.15□□□□□ -0.79
BEST3-212ENST00000553096 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.79
BEST3-212ENST00000553096 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.79
BEST3-212ENST00000553096 PDIA4P13667 645 aaKnown RBP10.14□□□□□ -0.79
BEST3-212ENST00000553096 FANCIQ9NVI1 1328 aa10.14□□□□□ -0.79
BEST3-212ENST00000553096 PLXNC1O60486 1568 aa10.14□□□□□ -0.79
BEST3-212ENST00000553096 ARHGEF12Q9NZN5 1544 aa10.14□□□□□ -0.79
BEST3-212ENST00000553096 UNC13BO14795 1591 aa10.13□□□□□ -0.79
BEST3-212ENST00000553096 HNRNPMP52272 730 aaKnown RBP eCLIP10.13□□□□□ -0.79
BEST3-212ENST00000553096 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
BEST3-212ENST00000553096 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms