RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
LINC02406-201ENST00000553029 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
LINC02406-201ENST00000553029 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
LINC02406-201ENST00000553029 MLECQ14165 292 aa11.19□□□□□ -0.62
LINC02406-201ENST00000553029 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
LINC02406-201ENST00000553029 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
LINC02406-201ENST00000553029 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
LINC02406-201ENST00000553029 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.62
LINC02406-201ENST00000553029 ABCA8O94911 1581 aa11.15□□□□□ -0.62
LINC02406-201ENST00000553029 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
LINC02406-201ENST00000553029 CEBPAP49715 358 aaPredicted RBP11.14□□□□□ -0.63
LINC02406-201ENST00000553029 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
LINC02406-201ENST00000553029 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
LINC02406-201ENST00000553029 HSPA1LP34931 641 aa11.13□□□□□ -0.63
LINC02406-201ENST00000553029 ZFYVE16Q7Z3T8 1539 aa11.11□□□□□ -0.63
LINC02406-201ENST00000553029 ARHGEF12Q9NZN5 1544 aa11.11□□□□□ -0.63
LINC02406-201ENST00000553029 FER1L4A9Z1Z3 1794 aa11.11□□□□□ -0.63
LINC02406-201ENST00000553029 EFCAB5A4FU69 1503 aa11.1□□□□□ -0.63
LINC02406-201ENST00000553029 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
LINC02406-201ENST00000553029 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
LINC02406-201ENST00000553029 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
LINC02406-201ENST00000553029 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
LINC02406-201ENST00000553029 ZNF335Q9H4Z2 1342 aaPredicted RBP11.08□□□□□ -0.64
LINC02406-201ENST00000553029 ATP10BO94823 1461 aa11.07□□□□□ -0.64
LINC02406-201ENST00000553029 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
LINC02406-201ENST00000553029 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
LINC02406-201ENST00000553029 DSG3P32926 999 aa11.06□□□□□ -0.64
LINC02406-201ENST00000553029 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
LINC02406-201ENST00000553029 CAPN15O75808 1086 aa11.04□□□□□ -0.64
LINC02406-201ENST00000553029 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
LINC02406-201ENST00000553029 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
LINC02406-201ENST00000553029 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
LINC02406-201ENST00000553029 ATP10AO60312 1499 aa11.01□□□□□ -0.65
LINC02406-201ENST00000553029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.01□□□□□ -0.65
LINC02406-201ENST00000553029 TOM1O60784 492 aa11.01□□□□□ -0.65
LINC02406-201ENST00000553029 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
LINC02406-201ENST00000553029 HNRNPUL2Q1KMD3 747 aaKnown RBP11.01□□□□□ -0.65
LINC02406-201ENST00000553029 FAM9AQ8IZU1 332 aaPredicted RBP11.01□□□□□ -0.65
LINC02406-201ENST00000553029 TRAPPC8Q9Y2L5 1435 aa11□□□□□ -0.65
LINC02406-201ENST00000553029 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
LINC02406-201ENST00000553029 SAMD1Q6SPF0 538 aaPredicted RBP10.98□□□□□ -0.65
LINC02406-201ENST00000553029 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
LINC02406-201ENST00000553029 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
LINC02406-201ENST00000553029 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
LINC02406-201ENST00000553029 CAMSAP1Q5T5Y3 1602 aa10.97□□□□□ -0.65
LINC02406-201ENST00000553029 APLP2Q06481 763 aa10.96□□□□□ -0.65
LINC02406-201ENST00000553029 RGS17Q9UGC6 210 aaPredicted RBP10.96□□□□□ -0.65
LINC02406-201ENST00000553029 ZBTB22O15209 634 aa10.95□□□□□ -0.66
LINC02406-201ENST00000553029 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
LINC02406-201ENST00000553029 PKD2Q13563 968 aa10.94□□□□□ -0.66
LINC02406-201ENST00000553029 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
LINC02406-201ENST00000553029 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
LINC02406-201ENST00000553029 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
LINC02406-201ENST00000553029 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
LINC02406-201ENST00000553029 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
LINC02406-201ENST00000553029 CPS1P31327 1500 aa10.9□□□□□ -0.66
LINC02406-201ENST00000553029 C3P01024 1663 aa10.9□□□□□ -0.66
LINC02406-201ENST00000553029 NPATQ14207 1427 aa10.9□□□□□ -0.66
LINC02406-201ENST00000553029 PTPRKQ15262 1439 aa10.9□□□□□ -0.66
LINC02406-201ENST00000553029 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
LINC02406-201ENST00000553029 PLEKHD1A6NEE1 506 aa10.89□□□□□ -0.67
LINC02406-201ENST00000553029 P3H3Q8IVL6 736 aa10.89□□□□□ -0.67
LINC02406-201ENST00000553029 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
LINC02406-201ENST00000553029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC02406-201ENST00000553029 POTEAQ6S8J7 498 aa10.87□□□□□ -0.67
LINC02406-201ENST00000553029 NUP153P49790 1475 aaKnown RBP10.87□□□□□ -0.67
LINC02406-201ENST00000553029 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
LINC02406-201ENST00000553029 AGLP35573 1532 aa10.86□□□□□ -0.67
LINC02406-201ENST00000553029 RAPGEF6Q8TEU7 1601 aa10.86□□□□□ -0.67
LINC02406-201ENST00000553029 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
LINC02406-201ENST00000553029 REREQ9P2R6 1566 aa10.85□□□□□ -0.67
LINC02406-201ENST00000553029 PLCH2O75038 1416 aa10.84□□□□□ -0.67
LINC02406-201ENST00000553029 ABCB7O75027 752 aa10.84□□□□□ -0.67
LINC02406-201ENST00000553029 SRCAPQ6ZRS2 3230 aa10.84□□□□□ -0.67
LINC02406-201ENST00000553029 SHANK2Q9UPX8 1470 aa10.83□□□□□ -0.68
LINC02406-201ENST00000553029 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
LINC02406-201ENST00000553029 ALKQ9UM73 1620 aa10.83□□□□□ -0.68
LINC02406-201ENST00000553029 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
LINC02406-201ENST00000553029 EFCAB2Q5VUJ9 269 aa10.81□□□□□ -0.68
LINC02406-201ENST00000553029 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
LINC02406-201ENST00000553029 CEP170BQ9Y4F5 1589 aaPredicted RBP10.81□□□□□ -0.68
LINC02406-201ENST00000553029 AFAP1Q8N556 730 aa10.8□□□□□ -0.68
LINC02406-201ENST00000553029 KDM5CP41229 1560 aa10.8□□□□□ -0.68
LINC02406-201ENST00000553029 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
LINC02406-201ENST00000553029 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC02406-201ENST00000553029 MYO3AQ8NEV4 1616 aa10.78□□□□□ -0.68
LINC02406-201ENST00000553029 ZNF142P52746 1687 aaPredicted RBP10.78□□□□□ -0.68
LINC02406-201ENST00000553029 SETD1AO15047 1707 aaKnown RBP10.77□□□□□ -0.69
LINC02406-201ENST00000553029 MLH3Q9UHC1 1453 aa10.76□□□□□ -0.69
LINC02406-201ENST00000553029 ABCA6Q8N139 1617 aa10.76□□□□□ -0.69
LINC02406-201ENST00000553029 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
LINC02406-201ENST00000553029 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
LINC02406-201ENST00000553029 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
LINC02406-201ENST00000553029 A2ML1A8K2U0 1454 aa10.73□□□□□ -0.69
LINC02406-201ENST00000553029 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
LINC02406-201ENST00000553029 NEURL4Q96JN8 1562 aa10.72□□□□□ -0.69
LINC02406-201ENST00000553029 RNF17Q9BXT8 1623 aaKnown RBP10.72□□□□□ -0.69
LINC02406-201ENST00000553029 LRRC7Q96NW7 1537 aa10.7□□□□□ -0.7
LINC02406-201ENST00000553029 ARHGAP5Q13017 1502 aa10.69□□□□□ -0.7
LINC02406-201ENST00000553029 POLA2Q14181 598 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms