RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 TEX14Q8IWB6 1497 aa14.92□□□□□ -0.02
CNOT2-242ENST00000553020 MED1Q15648 1581 aaPredicted RBP14.92□□□□□ -0.02
CNOT2-242ENST00000553020 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
CNOT2-242ENST00000553020 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
CNOT2-242ENST00000553020 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
CNOT2-242ENST00000553020 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
CNOT2-242ENST00000553020 CDK13Q14004 1512 aaKnown RBP14.88□□□□□ -0.03
CNOT2-242ENST00000553020 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
CNOT2-242ENST00000553020 TCOF1Q13428 1488 aaKnown RBP14.87□□□□□ -0.03
CNOT2-242ENST00000553020 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
CNOT2-242ENST00000553020 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
CNOT2-242ENST00000553020 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
CNOT2-242ENST00000553020 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
CNOT2-242ENST00000553020 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
CNOT2-242ENST00000553020 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.03
CNOT2-242ENST00000553020 ITSN2Q9NZM3 1697 aa14.83□□□□□ -0.04
CNOT2-242ENST00000553020 AKNAQ7Z591 1439 aa14.83□□□□□ -0.04
CNOT2-242ENST00000553020 MAP3K4Q9Y6R4 1608 aa14.82□□□□□ -0.04
CNOT2-242ENST00000553020 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
CNOT2-242ENST00000553020 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
CNOT2-242ENST00000553020 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
CNOT2-242ENST00000553020 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
CNOT2-242ENST00000553020 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
CNOT2-242ENST00000553020 IQSEC2Q5JU85 1478 aa14.77□□□□□ -0.04
CNOT2-242ENST00000553020 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
CNOT2-242ENST00000553020 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
CNOT2-242ENST00000553020 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
CNOT2-242ENST00000553020 KIF14Q15058 1648 aa14.76□□□□□ -0.05
CNOT2-242ENST00000553020 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CNOT2-242ENST00000553020 NAIPQ13075 1403 aa14.74□□□□□ -0.05
CNOT2-242ENST00000553020 BCORL1Q5H9F3 1711 aa14.72□□□□□ -0.05
CNOT2-242ENST00000553020 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
CNOT2-242ENST00000553020 YEATS2Q9ULM3 1422 aa14.72□□□□□ -0.05
CNOT2-242ENST00000553020 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.05
CNOT2-242ENST00000553020 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
CNOT2-242ENST00000553020 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
CNOT2-242ENST00000553020 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
CNOT2-242ENST00000553020 PTPRGP23470 1445 aa14.71□□□□□ -0.05
CNOT2-242ENST00000553020 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
CNOT2-242ENST00000553020 TONSLQ96HA7 1378 aa14.71□□□□□ -0.06
CNOT2-242ENST00000553020 ABCC2Q92887 1545 aa14.71□□□□□ -0.06
CNOT2-242ENST00000553020 DAPK1P53355 1430 aa14.7□□□□□ -0.06
CNOT2-242ENST00000553020 LTBP4Q8N2S1 1624 aa14.69□□□□□ -0.06
CNOT2-242ENST00000553020 PTPRKQ15262 1439 aa14.68□□□□□ -0.06
CNOT2-242ENST00000553020 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
CNOT2-242ENST00000553020 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
CNOT2-242ENST00000553020 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
CNOT2-242ENST00000553020 SRCAPQ6ZRS2 3230 aa14.66□□□□□ -0.06
CNOT2-242ENST00000553020 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CNOT2-242ENST00000553020 STRCQ7RTU9 1775 aa14.65□□□□□ -0.06
CNOT2-242ENST00000553020 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
CNOT2-242ENST00000553020 HSPA1LP34931 641 aa14.65□□□□□ -0.06
CNOT2-242ENST00000553020 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
CNOT2-242ENST00000553020 RRP7BPQ9NSQ0 103 aa14.64□□□□□ -0.07
CNOT2-242ENST00000553020 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
CNOT2-242ENST00000553020 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
CNOT2-242ENST00000553020 ABCC5O15440 1437 aa14.62□□□□□ -0.07
CNOT2-242ENST00000553020 ATP10BO94823 1461 aa14.62□□□□□ -0.07
CNOT2-242ENST00000553020 CROCC2H7BZ55 1655 aa14.61□□□□□ -0.07
CNOT2-242ENST00000553020 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
CNOT2-242ENST00000553020 PTPRTO14522 1441 aa14.6□□□□□ -0.07
CNOT2-242ENST00000553020 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
CNOT2-242ENST00000553020 ADGRL2O95490 1459 aa14.59□□□□□ -0.07
CNOT2-242ENST00000553020 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
CNOT2-242ENST00000553020 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
CNOT2-242ENST00000553020 CDC42BPAQ5VT25 1732 aa14.56□□□□□ -0.08
CNOT2-242ENST00000553020 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
CNOT2-242ENST00000553020 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
CNOT2-242ENST00000553020 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
CNOT2-242ENST00000553020 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
CNOT2-242ENST00000553020 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
CNOT2-242ENST00000553020 ARHGEF5Q12774 1597 aa14.53□□□□□ -0.08
CNOT2-242ENST00000553020 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
CNOT2-242ENST00000553020 C9orf84Q5VXU9 1444 aa14.52□□□□□ -0.08
CNOT2-242ENST00000553020 CD109Q6YHK3 1445 aa14.52□□□□□ -0.08
CNOT2-242ENST00000553020 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
CNOT2-242ENST00000553020 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
CNOT2-242ENST00000553020 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-242ENST00000553020 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-242ENST00000553020 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
CNOT2-242ENST00000553020 RGS17Q9UGC6 210 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-242ENST00000553020 PREX1Q8TCU6 1659 aa14.51□□□□□ -0.09
CNOT2-242ENST00000553020 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
CNOT2-242ENST00000553020 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
CNOT2-242ENST00000553020 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
CNOT2-242ENST00000553020 IFFO2Q5TF58 517 aa14.48□□□□□ -0.09
CNOT2-242ENST00000553020 MIER1Q8N108 512 aa14.48□□□□□ -0.09
CNOT2-242ENST00000553020 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
CNOT2-242ENST00000553020 MYO5CQ9NQX4 1742 aa14.48□□□□□ -0.09
CNOT2-242ENST00000553020 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
CNOT2-242ENST00000553020 PIP4K2BP78356 416 aa14.47□□□□□ -0.09
CNOT2-242ENST00000553020 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
CNOT2-242ENST00000553020 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
CNOT2-242ENST00000553020 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
CNOT2-242ENST00000553020 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
CNOT2-242ENST00000553020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.43□□□□□ -0.13e-8■■■□□ 17.7
CNOT2-242ENST00000553020 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
CNOT2-242ENST00000553020 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
CNOT2-242ENST00000553020 MAST1Q9Y2H9 1570 aa14.43□□□□□ -0.1
CNOT2-242ENST00000553020 KIAA1107Q9UPP5 1409 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms