RNA–Protein interactions for RNA: ENST00000552925.5

TMTC1-208, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best)

Gene TMTC1, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-208ENST00000552925 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
TMTC1-208ENST00000552925 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
TMTC1-208ENST00000552925 PLCH2O75038 1416 aa15.36■□□□□ 0.05
TMTC1-208ENST00000552925 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
TMTC1-208ENST00000552925 SCAPERQ9BY12 1400 aa15.35■□□□□ 0.05
TMTC1-208ENST00000552925 MLECQ14165 292 aa15.35■□□□□ 0.05
TMTC1-208ENST00000552925 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
TMTC1-208ENST00000552925 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
TMTC1-208ENST00000552925 ATP10AO60312 1499 aa15.34■□□□□ 0.05
TMTC1-208ENST00000552925 C9orf84Q5VXU9 1444 aa15.31■□□□□ 0.04
TMTC1-208ENST00000552925 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
TMTC1-208ENST00000552925 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
TMTC1-208ENST00000552925 PREX1Q8TCU6 1659 aa15.29■□□□□ 0.04
TMTC1-208ENST00000552925 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
TMTC1-208ENST00000552925 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
TMTC1-208ENST00000552925 ZNF518AQ6AHZ1 1483 aa15.25■□□□□ 0.03
TMTC1-208ENST00000552925 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
TMTC1-208ENST00000552925 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
TMTC1-208ENST00000552925 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
TMTC1-208ENST00000552925 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
TMTC1-208ENST00000552925 KDM5CP41229 1560 aa15.23■□□□□ 0.03
TMTC1-208ENST00000552925 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
TMTC1-208ENST00000552925 DISP3Q9P2K9 1392 aa15.22■□□□□ 0.03
TMTC1-208ENST00000552925 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
TMTC1-208ENST00000552925 PTPRTO14522 1441 aa15.22■□□□□ 0.03
TMTC1-208ENST00000552925 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
TMTC1-208ENST00000552925 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.02
TMTC1-208ENST00000552925 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
TMTC1-208ENST00000552925 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
TMTC1-208ENST00000552925 SOCS7O14512 581 aa15.2■□□□□ 0.02
TMTC1-208ENST00000552925 KIF14Q15058 1648 aa15.19■□□□□ 0.02
TMTC1-208ENST00000552925 DIP2CQ9Y2E4 1556 aa15.19■□□□□ 0.02
TMTC1-208ENST00000552925 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
TMTC1-208ENST00000552925 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
TMTC1-208ENST00000552925 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
TMTC1-208ENST00000552925 AGLP35573 1532 aa15.17■□□□□ 0.02
TMTC1-208ENST00000552925 MSH5O43196 834 aa15.16■□□□□ 0.02
TMTC1-208ENST00000552925 CLIP1P30622 1438 aa15.16■□□□□ 0.02
TMTC1-208ENST00000552925 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
TMTC1-208ENST00000552925 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 TRAPPC8Q9Y2L5 1435 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 C3P01024 1663 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
TMTC1-208ENST00000552925 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
TMTC1-208ENST00000552925 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
TMTC1-208ENST00000552925 NCOA1Q15788 1441 aa15.11■□□□□ 0.01
TMTC1-208ENST00000552925 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
TMTC1-208ENST00000552925 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
TMTC1-208ENST00000552925 CDC42BPBQ9Y5S2 1711 aa15.1■□□□□ 0.01
TMTC1-208ENST00000552925 ABCC1P33527 1531 aa15.1■□□□□ 0.01
TMTC1-208ENST00000552925 PREX2Q70Z35 1606 aa15.08■□□□□ 0
TMTC1-208ENST00000552925 NPATQ14207 1427 aa15.08■□□□□ 0
TMTC1-208ENST00000552925 LRRIQ1Q96JM4 1722 aa15.07■□□□□ 0
TMTC1-208ENST00000552925 ITSN2Q9NZM3 1697 aa15.07■□□□□ 0
TMTC1-208ENST00000552925 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
TMTC1-208ENST00000552925 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
TMTC1-208ENST00000552925 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
TMTC1-208ENST00000552925 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
TMTC1-208ENST00000552925 CASKIN1Q8WXD9 1431 aa15.03■□□□□ -0
TMTC1-208ENST00000552925 MROH2AA6NES4 1674 aa15.03■□□□□ -0
TMTC1-208ENST00000552925 ZMYM3Q14202 1370 aa15.02□□□□□ -0.01
TMTC1-208ENST00000552925 SAMD9LQ8IVG5 1584 aa15.02□□□□□ -0.01
TMTC1-208ENST00000552925 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
TMTC1-208ENST00000552925 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
TMTC1-208ENST00000552925 PKD2Q13563 968 aa14.99□□□□□ -0.01
TMTC1-208ENST00000552925 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
TMTC1-208ENST00000552925 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
TMTC1-208ENST00000552925 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
TMTC1-208ENST00000552925 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
TMTC1-208ENST00000552925 TCOF1Q13428 1488 aaKnown RBP14.97□□□□□ -0.01
TMTC1-208ENST00000552925 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
TMTC1-208ENST00000552925 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.01
TMTC1-208ENST00000552925 GPATCH8Q9UKJ3 1502 aaKnown RBP14.96□□□□□ -0.01
TMTC1-208ENST00000552925 PTPRKQ15262 1439 aa14.96□□□□□ -0.02
TMTC1-208ENST00000552925 KIAA1107Q9UPP5 1409 aa14.96□□□□□ -0.02
TMTC1-208ENST00000552925 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
TMTC1-208ENST00000552925 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
TMTC1-208ENST00000552925 PLXNC1O60486 1568 aa14.95□□□□□ -0.02
TMTC1-208ENST00000552925 FYCO1Q9BQS8 1478 aa14.94□□□□□ -0.02
TMTC1-208ENST00000552925 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
TMTC1-208ENST00000552925 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
TMTC1-208ENST00000552925 A2MP01023 1474 aa14.94□□□□□ -0.02
TMTC1-208ENST00000552925 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
TMTC1-208ENST00000552925 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
TMTC1-208ENST00000552925 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
TMTC1-208ENST00000552925 SUPT6HQ7KZ85 1726 aaKnown RBP14.93□□□□□ -0.02
TMTC1-208ENST00000552925 INO80Q9ULG1 1556 aaPredicted RBP14.92□□□□□ -0.02
TMTC1-208ENST00000552925 CLTCQ00610 1675 aaKnown RBP14.92□□□□□ -0.02
TMTC1-208ENST00000552925 GGT6Q6P531 493 aa14.89□□□□□ -0.03
TMTC1-208ENST00000552925 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
TMTC1-208ENST00000552925 A2ML1A8K2U0 1454 aa14.88□□□□□ -0.03
TMTC1-208ENST00000552925 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
TMTC1-208ENST00000552925 DNMT1P26358 1616 aaKnown RBP14.85□□□□□ -0.03
TMTC1-208ENST00000552925 ADGBQ8N7X0 1667 aa14.85□□□□□ -0.03
TMTC1-208ENST00000552925 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.03
TMTC1-208ENST00000552925 CPS1P31327 1500 aa14.83□□□□□ -0.03
TMTC1-208ENST00000552925 HSPA1LP34931 641 aa14.83□□□□□ -0.04
TMTC1-208ENST00000552925 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms