RNA–Protein interactions for RNA: ENST00000552888.1

NUBPL-213, Transcript of nucleotide binding protein like, humanhuman

TSL 2

Gene NUBPL, Length 5,032 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBPL-213ENST00000552888 NUP155O75694 1391 aa12.72□□□□□ -0.37
NUBPL-213ENST00000552888 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.38
NUBPL-213ENST00000552888 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.38
NUBPL-213ENST00000552888 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
NUBPL-213ENST00000552888 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
NUBPL-213ENST00000552888 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
NUBPL-213ENST00000552888 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
NUBPL-213ENST00000552888 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
NUBPL-213ENST00000552888 IRX6P78412 446 aaPredicted RBP12.69□□□□□ -0.38
NUBPL-213ENST00000552888 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
NUBPL-213ENST00000552888 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
NUBPL-213ENST00000552888 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
NUBPL-213ENST00000552888 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
NUBPL-213ENST00000552888 GAPVD1Q14C86 1478 aa12.67□□□□□ -0.38
NUBPL-213ENST00000552888 IGF1RP08069 1367 aa12.66□□□□□ -0.38
NUBPL-213ENST00000552888 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.38
NUBPL-213ENST00000552888 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
NUBPL-213ENST00000552888 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
NUBPL-213ENST00000552888 MORC1Q86VD1 984 aa12.64□□□□□ -0.39
NUBPL-213ENST00000552888 HDGFL2Q7Z4V5 671 aaPredicted RBP12.64□□□□□ -0.39
NUBPL-213ENST00000552888 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
NUBPL-213ENST00000552888 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
NUBPL-213ENST00000552888 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
NUBPL-213ENST00000552888 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
NUBPL-213ENST00000552888 NBR1Q14596 966 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 CC2D1BQ5T0F9 858 aaKnown RBP12.62□□□□□ -0.39
NUBPL-213ENST00000552888 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 KIF15Q9NS87 1388 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
NUBPL-213ENST00000552888 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
NUBPL-213ENST00000552888 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
NUBPL-213ENST00000552888 NOP58Q9Y2X3 529 aaKnown RBP12.61□□□□□ -0.39
NUBPL-213ENST00000552888 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
NUBPL-213ENST00000552888 FGD6Q6ZV73 1430 aa12.6□□□□□ -0.39
NUBPL-213ENST00000552888 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
NUBPL-213ENST00000552888 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
NUBPL-213ENST00000552888 PTMSP20962 102 aa12.59□□□□□ -0.39
NUBPL-213ENST00000552888 TRIM44Q96DX7 344 aaPredicted RBP12.59□□□□□ -0.39
NUBPL-213ENST00000552888 PTPRGP23470 1445 aa12.58□□□□□ -0.39
NUBPL-213ENST00000552888 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
NUBPL-213ENST00000552888 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
NUBPL-213ENST00000552888 WDR97A6NE52 1622 aa12.58□□□□□ -0.4
NUBPL-213ENST00000552888 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
NUBPL-213ENST00000552888 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
NUBPL-213ENST00000552888 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
NUBPL-213ENST00000552888 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
NUBPL-213ENST00000552888 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
NUBPL-213ENST00000552888 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
NUBPL-213ENST00000552888 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
NUBPL-213ENST00000552888 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
NUBPL-213ENST00000552888 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
NUBPL-213ENST00000552888 FRAT1Q92837 279 aaPredicted RBP12.54□□□□□ -0.4
NUBPL-213ENST00000552888 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
NUBPL-213ENST00000552888 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 MCCP23508 829 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 RWDD1Q9H446 243 aaPredicted RBP12.53□□□□□ -0.4
NUBPL-213ENST00000552888 CUL7Q14999 1698 aa12.53□□□□□ -0.4
NUBPL-213ENST00000552888 GGT6Q6P531 493 aa12.52□□□□□ -0.41
NUBPL-213ENST00000552888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUBPL-213ENST00000552888 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
NUBPL-213ENST00000552888 KIF3BO15066 747 aa12.51□□□□□ -0.41
NUBPL-213ENST00000552888 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
NUBPL-213ENST00000552888 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
NUBPL-213ENST00000552888 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
NUBPL-213ENST00000552888 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
NUBPL-213ENST00000552888 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
NUBPL-213ENST00000552888 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
NUBPL-213ENST00000552888 RGS3P49796 1198 aa12.5□□□□□ -0.41
NUBPL-213ENST00000552888 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
NUBPL-213ENST00000552888 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
NUBPL-213ENST00000552888 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
NUBPL-213ENST00000552888 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
NUBPL-213ENST00000552888 ZBTB7CA1YPR0 619 aa12.48□□□□□ -0.41
NUBPL-213ENST00000552888 FOXD1Q16676 465 aa12.48□□□□□ -0.41
NUBPL-213ENST00000552888 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
NUBPL-213ENST00000552888 PLEKHH2Q8IVE3 1493 aa12.47□□□□□ -0.41
NUBPL-213ENST00000552888 USP47Q96K76 1375 aa12.47□□□□□ -0.41
NUBPL-213ENST00000552888 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
NUBPL-213ENST00000552888 NESP48681 1621 aa12.47□□□□□ -0.41
NUBPL-213ENST00000552888 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
NUBPL-213ENST00000552888 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.41
NUBPL-213ENST00000552888 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.42
NUBPL-213ENST00000552888 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.42
NUBPL-213ENST00000552888 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
NUBPL-213ENST00000552888 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUBPL-213ENST00000552888 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NUBPL-213ENST00000552888 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
NUBPL-213ENST00000552888 GOLGA6L6A8MZA4 724 aa12.44□□□□□ -0.42
NUBPL-213ENST00000552888 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
NUBPL-213ENST00000552888 RBM19Q9Y4C8 960 aaKnown RBP12.44□□□□□ -0.42
NUBPL-213ENST00000552888 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
NUBPL-213ENST00000552888 AAMPQ13685 434 aa12.44□□□□□ -0.42
NUBPL-213ENST00000552888 NRDCO43847 1150 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms