RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 ZMYM4Q5VZL5 1548 aa15.38■□□□□ 0.05
PRKCH-203ENST00000552875 ARHGEF12Q9NZN5 1544 aa15.38■□□□□ 0.05
PRKCH-203ENST00000552875 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
PRKCH-203ENST00000552875 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
PRKCH-203ENST00000552875 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
PRKCH-203ENST00000552875 HSPA1LP34931 641 aa15.34■□□□□ 0.05
PRKCH-203ENST00000552875 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
PRKCH-203ENST00000552875 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
PRKCH-203ENST00000552875 C9orf84Q5VXU9 1444 aa15.32■□□□□ 0.04
PRKCH-203ENST00000552875 ATP10AO60312 1499 aa15.32■□□□□ 0.04
PRKCH-203ENST00000552875 TOM1O60784 492 aa15.3■□□□□ 0.04
PRKCH-203ENST00000552875 SETD1BQ9UPS6 1966 aaKnown RBP15.3■□□□□ 0.04
PRKCH-203ENST00000552875 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
PRKCH-203ENST00000552875 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
PRKCH-203ENST00000552875 SIGLEC1Q9BZZ2 1709 aa15.28■□□□□ 0.04
PRKCH-203ENST00000552875 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
PRKCH-203ENST00000552875 PLEKHD1A6NEE1 506 aa15.27■□□□□ 0.04
PRKCH-203ENST00000552875 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
PRKCH-203ENST00000552875 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
PRKCH-203ENST00000552875 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
PRKCH-203ENST00000552875 PKD2Q13563 968 aa15.22■□□□□ 0.03
PRKCH-203ENST00000552875 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
PRKCH-203ENST00000552875 NCKAP5LQ9HCH0 1330 aa15.19■□□□□ 0.02
PRKCH-203ENST00000552875 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
PRKCH-203ENST00000552875 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
PRKCH-203ENST00000552875 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
PRKCH-203ENST00000552875 RAPGEF6Q8TEU7 1601 aa15.16■□□□□ 0.02
PRKCH-203ENST00000552875 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
PRKCH-203ENST00000552875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRKCH-203ENST00000552875 NPATQ14207 1427 aa15.14■□□□□ 0.01
PRKCH-203ENST00000552875 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
PRKCH-203ENST00000552875 C3P01024 1663 aa15.13■□□□□ 0.01
PRKCH-203ENST00000552875 EFCAB2Q5VUJ9 269 aa15.13■□□□□ 0.01
PRKCH-203ENST00000552875 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
PRKCH-203ENST00000552875 NUP153P49790 1475 aaKnown RBP15.12■□□□□ 0.01
PRKCH-203ENST00000552875 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
PRKCH-203ENST00000552875 PLCH2O75038 1416 aa15.11■□□□□ 0.01
PRKCH-203ENST00000552875 CPS1P31327 1500 aa15.11■□□□□ 0.01
PRKCH-203ENST00000552875 AGLP35573 1532 aa15.09■□□□□ 0.01
PRKCH-203ENST00000552875 REREQ9P2R6 1566 aa15.07■□□□□ 0
PRKCH-203ENST00000552875 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
PRKCH-203ENST00000552875 TCOF1Q13428 1488 aaKnown RBP15.07■□□□□ 0
PRKCH-203ENST00000552875 AFAP1Q8N556 730 aa15.05■□□□□ -0
PRKCH-203ENST00000552875 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
PRKCH-203ENST00000552875 ZMYM3Q14202 1370 aa15.02■□□□□ -0
PRKCH-203ENST00000552875 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
PRKCH-203ENST00000552875 KDM5CP41229 1560 aa15.01□□□□□ -0.01
PRKCH-203ENST00000552875 DIP2CQ9Y2E4 1556 aa15.01□□□□□ -0.01
PRKCH-203ENST00000552875 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
PRKCH-203ENST00000552875 SAMD9Q5K651 1589 aa15□□□□□ -0.01
PRKCH-203ENST00000552875 MLH3Q9UHC1 1453 aa14.99□□□□□ -0.01
PRKCH-203ENST00000552875 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
PRKCH-203ENST00000552875 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
PRKCH-203ENST00000552875 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
PRKCH-203ENST00000552875 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
PRKCH-203ENST00000552875 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
PRKCH-203ENST00000552875 MYO3AQ8NEV4 1616 aa14.94□□□□□ -0.02
PRKCH-203ENST00000552875 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
PRKCH-203ENST00000552875 ABCA6Q8N139 1617 aa14.92□□□□□ -0.02
PRKCH-203ENST00000552875 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
PRKCH-203ENST00000552875 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
PRKCH-203ENST00000552875 ANKLE2Q86XL3 938 aa14.9□□□□□ -0.02
PRKCH-203ENST00000552875 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
PRKCH-203ENST00000552875 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
PRKCH-203ENST00000552875 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
PRKCH-203ENST00000552875 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRKCH-203ENST00000552875 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
PRKCH-203ENST00000552875 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
PRKCH-203ENST00000552875 CLIP1P30622 1438 aa14.83□□□□□ -0.03
PRKCH-203ENST00000552875 VWDEQ8N2E2 1590 aa14.83□□□□□ -0.04
PRKCH-203ENST00000552875 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
PRKCH-203ENST00000552875 ATP1B4Q9UN42 357 aaPredicted RBP14.83□□□□□ -0.04
PRKCH-203ENST00000552875 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
PRKCH-203ENST00000552875 KIF14Q15058 1648 aa14.82□□□□□ -0.04
PRKCH-203ENST00000552875 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
PRKCH-203ENST00000552875 GGT6Q6P531 493 aa14.81□□□□□ -0.04
PRKCH-203ENST00000552875 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
PRKCH-203ENST00000552875 POLR1AO95602 1720 aaPredicted RBP14.8□□□□□ -0.04
PRKCH-203ENST00000552875 LRRC7Q96NW7 1537 aa14.8□□□□□ -0.04
PRKCH-203ENST00000552875 CLTCQ00610 1675 aaKnown RBP14.79□□□□□ -0.04
PRKCH-203ENST00000552875 FOXD1Q16676 465 aa14.79□□□□□ -0.04
PRKCH-203ENST00000552875 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
PRKCH-203ENST00000552875 SYNMO15061 1565 aa14.77□□□□□ -0.04
PRKCH-203ENST00000552875 ABCC1P33527 1531 aa14.77□□□□□ -0.04
PRKCH-203ENST00000552875 MED14O60244 1454 aa14.77□□□□□ -0.04
PRKCH-203ENST00000552875 FAM135BQ49AJ0 1406 aa14.77□□□□□ -0.04
PRKCH-203ENST00000552875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
PRKCH-203ENST00000552875 SPAG9O60271 1321 aaKnown RBP14.77□□□□□ -0.04
PRKCH-203ENST00000552875 TROQ12816 1431 aaPredicted RBP14.76□□□□□ -0.05
PRKCH-203ENST00000552875 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
PRKCH-203ENST00000552875 TNRQ92752 1358 aa14.76□□□□□ -0.05
PRKCH-203ENST00000552875 KIDINS220Q9ULH0 1771 aa14.76□□□□□ -0.05
PRKCH-203ENST00000552875 ZNF772Q68DY9 489 aaPredicted RBP14.75□□□□□ -0.05
PRKCH-203ENST00000552875 FAM135AQ9P2D6 1515 aa14.74□□□□□ -0.05
PRKCH-203ENST00000552875 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
PRKCH-203ENST00000552875 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
PRKCH-203ENST00000552875 A2MP01023 1474 aa14.72□□□□□ -0.05
PRKCH-203ENST00000552875 DEPDC5O75140 1603 aa14.71□□□□□ -0.05
PRKCH-203ENST00000552875 FMN1Q68DA7 1419 aa14.71□□□□□ -0.05
PRKCH-203ENST00000552875 ITSN2Q9NZM3 1697 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms