RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FHOD3Q2V2M9 1422 aa7.5□□□□□ -1.21
TMEM106C-220ENST00000552561 ADAMTSL3P82987 1691 aa7.5□□□□□ -1.21
TMEM106C-220ENST00000552561 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
TMEM106C-220ENST00000552561 ZMYM4Q5VZL5 1548 aa7.48□□□□□ -1.21
TMEM106C-220ENST00000552561 KCNH8Q96L42 1107 aa7.48□□□□□ -1.21
TMEM106C-220ENST00000552561 MAGI2Q86UL8 1455 aa7.48□□□□□ -1.21
TMEM106C-220ENST00000552561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.47□□□□□ -1.21
TMEM106C-220ENST00000552561 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
TMEM106C-220ENST00000552561 CFAP74Q9C0B2 1584 aa7.46□□□□□ -1.21
TMEM106C-220ENST00000552561 MADDQ8WXG6 1647 aa7.46□□□□□ -1.21
TMEM106C-220ENST00000552561 RIMS1Q86UR5 1692 aaKnown RBP7.46□□□□□ -1.22
TMEM106C-220ENST00000552561 ARHGEF40Q8TER5 1519 aa7.46□□□□□ -1.22
TMEM106C-220ENST00000552561 FMN1Q68DA7 1419 aa7.45□□□□□ -1.22
TMEM106C-220ENST00000552561 DENND4BO75064 1496 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-220ENST00000552561 BCORL1Q5H9F3 1711 aa7.45□□□□□ -1.22
TMEM106C-220ENST00000552561 SLC4A2P04920 1241 aa7.45□□□□□ -1.22
TMEM106C-220ENST00000552561 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-220ENST00000552561 PLCH2O75038 1416 aa7.44□□□□□ -1.22
TMEM106C-220ENST00000552561 AKNAQ7Z591 1439 aa7.44□□□□□ -1.22
TMEM106C-220ENST00000552561 FANCAO15360 1455 aa7.44□□□□□ -1.22
TMEM106C-220ENST00000552561 PLEKHD1A6NEE1 506 aa7.44□□□□□ -1.22
TMEM106C-220ENST00000552561 ARID4BQ4LE39 1312 aaPredicted RBP7.44□□□□□ -1.22
TMEM106C-220ENST00000552561 ARHGAP35Q9NRY4 1499 aa7.43□□□□□ -1.22
TMEM106C-220ENST00000552561 TTC37Q6PGP7 1564 aa7.43□□□□□ -1.22
TMEM106C-220ENST00000552561 P3H3Q8IVL6 736 aa7.43□□□□□ -1.22
TMEM106C-220ENST00000552561 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
TMEM106C-220ENST00000552561 RAPGEF3O95398 923 aa7.42□□□□□ -1.22
TMEM106C-220ENST00000552561 HECW1Q76N89 1606 aa7.41□□□□□ -1.22
TMEM106C-220ENST00000552561 POGZQ7Z3K3 1410 aa7.41□□□□□ -1.22
TMEM106C-220ENST00000552561 REREQ9P2R6 1566 aa7.41□□□□□ -1.22
TMEM106C-220ENST00000552561 PREX1Q8TCU6 1659 aa7.41□□□□□ -1.22
TMEM106C-220ENST00000552561 HSPA2P54652 639 aa7.4□□□□□ -1.22
TMEM106C-220ENST00000552561 TROQ12816 1431 aaPredicted RBP7.4□□□□□ -1.22
TMEM106C-220ENST00000552561 CDK13Q14004 1512 aaKnown RBP7.4□□□□□ -1.22
TMEM106C-220ENST00000552561 KDM5CP41229 1560 aa7.4□□□□□ -1.22
TMEM106C-220ENST00000552561 ZFYVE16Q7Z3T8 1539 aa7.39□□□□□ -1.23
TMEM106C-220ENST00000552561 SIGLEC1Q9BZZ2 1709 aa7.38□□□□□ -1.23
TMEM106C-220ENST00000552561 ARHGEF12Q9NZN5 1544 aa7.38□□□□□ -1.23
TMEM106C-220ENST00000552561 CDK11AQ9UQ88 783 aaPredicted RBP7.38□□□□□ -1.23
TMEM106C-220ENST00000552561 MYO5CQ9NQX4 1742 aa7.38□□□□□ -1.23
TMEM106C-220ENST00000552561 CCDC18Q5T9S5 1454 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 ZNF518AQ6AHZ1 1483 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 MLH3Q9UHC1 1453 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 CASKIN1Q8WXD9 1431 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 SCAPERQ9BY12 1400 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 YEATS2Q9ULM3 1422 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 APLP2Q06481 763 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 FER1L4A9Z1Z3 1794 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 KIF14Q15058 1648 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 MED1Q15648 1581 aaPredicted RBP7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 AGLP35573 1532 aa7.37□□□□□ -1.23
TMEM106C-220ENST00000552561 ATP10AO60312 1499 aa7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 LRRIQ1Q96JM4 1722 aa7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 HNRNPUL2Q1KMD3 747 aaKnown RBP7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 EFCAB2Q5VUJ9 269 aa7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
TMEM106C-220ENST00000552561 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
TMEM106C-220ENST00000552561 FYCO1Q9BQS8 1478 aa7.35□□□□□ -1.23
TMEM106C-220ENST00000552561 CLIP1P30622 1438 aa7.35□□□□□ -1.23
TMEM106C-220ENST00000552561 PREX2Q70Z35 1606 aa7.34□□□□□ -1.23
TMEM106C-220ENST00000552561 SETD1BQ9UPS6 1966 aaKnown RBP7.34□□□□□ -1.23
TMEM106C-220ENST00000552561 CDC42BPBQ9Y5S2 1711 aa7.34□□□□□ -1.23
TMEM106C-220ENST00000552561 ABCC1P33527 1531 aa7.33□□□□□ -1.24
TMEM106C-220ENST00000552561 ABCB7O75027 752 aa7.33□□□□□ -1.24
TMEM106C-220ENST00000552561 DIP2CQ9Y2E4 1556 aa7.33□□□□□ -1.24
TMEM106C-220ENST00000552561 UBTFP17480 764 aaKnown RBP7.32□□□□□ -1.24
TMEM106C-220ENST00000552561 UHRF1BP1Q6BDS2 1440 aa7.32□□□□□ -1.24
TMEM106C-220ENST00000552561 UBAP1LF5GYI3 381 aa7.31□□□□□ -1.24
TMEM106C-220ENST00000552561 PTPRTO14522 1441 aa7.31□□□□□ -1.24
TMEM106C-220ENST00000552561 KIAA1107Q9UPP5 1409 aa7.31□□□□□ -1.24
TMEM106C-220ENST00000552561 ITSN2Q9NZM3 1697 aa7.3□□□□□ -1.24
TMEM106C-220ENST00000552561 ARHGAP5Q13017 1502 aa7.3□□□□□ -1.24
TMEM106C-220ENST00000552561 KIDINS220Q9ULH0 1771 aa7.3□□□□□ -1.24
TMEM106C-220ENST00000552561 ABCA6Q8N139 1617 aa7.3□□□□□ -1.24
TMEM106C-220ENST00000552561 CDC42BPAQ5VT25 1732 aa7.3□□□□□ -1.24
TMEM106C-220ENST00000552561 TRAPPC8Q9Y2L5 1435 aa7.29□□□□□ -1.24
TMEM106C-220ENST00000552561 STRCQ7RTU9 1775 aa7.29□□□□□ -1.24
TMEM106C-220ENST00000552561 GPATCH8Q9UKJ3 1502 aaKnown RBP7.29□□□□□ -1.24
TMEM106C-220ENST00000552561 PLXNC1O60486 1568 aa7.29□□□□□ -1.24
TMEM106C-220ENST00000552561 CNTLNQ9NXG0 1405 aa7.28□□□□□ -1.24
TMEM106C-220ENST00000552561 SAMD1Q6SPF0 538 aaPredicted RBP7.28□□□□□ -1.24
TMEM106C-220ENST00000552561 AFAP1Q8N556 730 aa7.28□□□□□ -1.24
TMEM106C-220ENST00000552561 PLEKHH2Q8IVE3 1493 aa7.28□□□□□ -1.24
TMEM106C-220ENST00000552561 NPATQ14207 1427 aa7.27□□□□□ -1.24
TMEM106C-220ENST00000552561 RANGAP1P46060 587 aaPredicted RBP7.27□□□□□ -1.25
TMEM106C-220ENST00000552561 SAMD9LQ8IVG5 1584 aa7.27□□□□□ -1.25
TMEM106C-220ENST00000552561 MROH2AA6NES4 1674 aa7.27□□□□□ -1.25
TMEM106C-220ENST00000552561 INO80Q9ULG1 1556 aaPredicted RBP7.26□□□□□ -1.25
TMEM106C-220ENST00000552561 LTBP4Q8N2S1 1624 aa7.26□□□□□ -1.25
TMEM106C-220ENST00000552561 C3P01024 1663 aa7.25□□□□□ -1.25
TMEM106C-220ENST00000552561 CHRDL2Q6WN34 429 aa7.25□□□□□ -1.25
TMEM106C-220ENST00000552561 FAM135AQ9P2D6 1515 aa7.25□□□□□ -1.25
TMEM106C-220ENST00000552561 RTEL1-TNFRSF6BF6WH68 1400 aa7.25□□□□□ -1.25
TMEM106C-220ENST00000552561 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
TMEM106C-220ENST00000552561 MBD5Q9P267 1494 aa7.24□□□□□ -1.25
TMEM106C-220ENST00000552561 ATP7AQ04656 1500 aa7.23□□□□□ -1.25
TMEM106C-220ENST00000552561 EHBP1L1Q8N3D4 1523 aa7.23□□□□□ -1.25
TMEM106C-220ENST00000552561 SYCP2Q9BX26 1530 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms