RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 CARMIL2Q6F5E8 1435 aa10.03□□□□□ -0.8
CCDC59-206ENST00000552412 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
CCDC59-206ENST00000552412 PTPN23Q9H3S7 1636 aa10.03□□□□□ -0.8
CCDC59-206ENST00000552412 ACIN1Q9UKV3 1341 aaKnown RBP10.03□□□□□ -0.8
CCDC59-206ENST00000552412 ZNF316A6NFI3 1004 aaPredicted RBP10.02□□□□□ -0.81
CCDC59-206ENST00000552412 MAGI3Q5TCQ9 1506 aa10.02□□□□□ -0.81
CCDC59-206ENST00000552412 HFM1A2PYH4 1435 aa10.01□□□□□ -0.81
CCDC59-206ENST00000552412 FBLN2P98095 1184 aa10.01□□□□□ -0.81
CCDC59-206ENST00000552412 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
CCDC59-206ENST00000552412 FAM50AQ14320 339 aaKnown RBP10□□□□□ -0.81
CCDC59-206ENST00000552412 OSCARQ8IYS5 282 aa10□□□□□ -0.81
CCDC59-206ENST00000552412 MAPKBP1O60336 1514 aa10□□□□□ -0.81
CCDC59-206ENST00000552412 NUP153P49790 1475 aaKnown RBP9.99□□□□□ -0.81
CCDC59-206ENST00000552412 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
CCDC59-206ENST00000552412 ADCY10Q96PN6 1610 aa9.99□□□□□ -0.81
CCDC59-206ENST00000552412 CDK13Q14004 1512 aaKnown RBP9.98□□□□□ -0.81
CCDC59-206ENST00000552412 CDK11AQ9UQ88 783 aaPredicted RBP9.98□□□□□ -0.81
CCDC59-206ENST00000552412 GCC2Q8IWJ2 1684 aa9.98□□□□□ -0.81
CCDC59-206ENST00000552412 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
CCDC59-206ENST00000552412 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.81
CCDC59-206ENST00000552412 ITGAEP38570 1179 aa9.95□□□□□ -0.82
CCDC59-206ENST00000552412 TROQ12816 1431 aaPredicted RBP9.95□□□□□ -0.82
CCDC59-206ENST00000552412 UACAQ9BZF9 1416 aa9.95□□□□□ -0.82
CCDC59-206ENST00000552412 ABCA8O94911 1581 aa9.95□□□□□ -0.82
CCDC59-206ENST00000552412 NAIPQ13075 1403 aa9.94□□□□□ -0.82
CCDC59-206ENST00000552412 ROCK1Q13464 1354 aa9.93□□□□□ -0.82
CCDC59-206ENST00000552412 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
CCDC59-206ENST00000552412 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
CCDC59-206ENST00000552412 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
CCDC59-206ENST00000552412 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
CCDC59-206ENST00000552412 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
CCDC59-206ENST00000552412 CHD1O14646 1710 aa9.91□□□□□ -0.82
CCDC59-206ENST00000552412 PLB1Q6P1J6 1458 aa9.9□□□□□ -0.83
CCDC59-206ENST00000552412 KIF14Q15058 1648 aa9.89□□□□□ -0.83
CCDC59-206ENST00000552412 DAPK1P53355 1430 aa9.88□□□□□ -0.83
CCDC59-206ENST00000552412 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
CCDC59-206ENST00000552412 ADGRL2O95490 1459 aa9.86□□□□□ -0.83
CCDC59-206ENST00000552412 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
CCDC59-206ENST00000552412 PRG4Q92954 1404 aaPredicted RBP9.86□□□□□ -0.83
CCDC59-206ENST00000552412 CROCC2H7BZ55 1655 aa9.86□□□□□ -0.83
CCDC59-206ENST00000552412 GPATCH8Q9UKJ3 1502 aaKnown RBP9.86□□□□□ -0.83
CCDC59-206ENST00000552412 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
CCDC59-206ENST00000552412 ATP10BO94823 1461 aa9.85□□□□□ -0.83
CCDC59-206ENST00000552412 CAMSAP2Q08AD1 1489 aa9.85□□□□□ -0.83
CCDC59-206ENST00000552412 ABCC10Q5T3U5 1492 aa9.85□□□□□ -0.83
CCDC59-206ENST00000552412 ABCC5O15440 1437 aa9.84□□□□□ -0.83
CCDC59-206ENST00000552412 PTPRGP23470 1445 aa9.84□□□□□ -0.83
CCDC59-206ENST00000552412 CDC42BPAQ5VT25 1732 aa9.84□□□□□ -0.83
CCDC59-206ENST00000552412 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
CCDC59-206ENST00000552412 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
CCDC59-206ENST00000552412 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
CCDC59-206ENST00000552412 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
CCDC59-206ENST00000552412 REM2Q8IYK8 340 aaPredicted RBP9.83□□□□□ -0.84
CCDC59-206ENST00000552412 CLASP1Q7Z460 1538 aa9.82□□□□□ -0.84
CCDC59-206ENST00000552412 PLEKHD1A6NEE1 506 aa9.82□□□□□ -0.84
CCDC59-206ENST00000552412 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
CCDC59-206ENST00000552412 CENPBP07199 599 aaPredicted RBP9.81□□□□□ -0.84
CCDC59-206ENST00000552412 ABCC2Q92887 1545 aa9.81□□□□□ -0.84
CCDC59-206ENST00000552412 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
CCDC59-206ENST00000552412 TONSLQ96HA7 1378 aa9.8□□□□□ -0.84
CCDC59-206ENST00000552412 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
CCDC59-206ENST00000552412 PREX2Q70Z35 1606 aa9.8□□□□□ -0.84
CCDC59-206ENST00000552412 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
CCDC59-206ENST00000552412 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
CCDC59-206ENST00000552412 NCOA1Q15788 1441 aa9.78□□□□□ -0.84
CCDC59-206ENST00000552412 KDM6BO15054 1643 aa9.78□□□□□ -0.84
CCDC59-206ENST00000552412 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.84
CCDC59-206ENST00000552412 RRP7BPQ9NSQ0 103 aa9.77□□□□□ -0.85
CCDC59-206ENST00000552412 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.85
CCDC59-206ENST00000552412 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
CCDC59-206ENST00000552412 RSPH4AQ5TD94 716 aa9.76□□□□□ -0.85
CCDC59-206ENST00000552412 SIN3AQ96ST3 1273 aa9.76□□□□□ -0.85
CCDC59-206ENST00000552412 PLEKHH2Q8IVE3 1493 aa9.76□□□□□ -0.85
CCDC59-206ENST00000552412 KDM5DQ9BY66 1539 aa9.76□□□□□ -0.85
CCDC59-206ENST00000552412 MAST1Q9Y2H9 1570 aa9.75□□□□□ -0.85
CCDC59-206ENST00000552412 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
CCDC59-206ENST00000552412 KDM5BQ9UGL1 1544 aa9.75□□□□□ -0.85
CCDC59-206ENST00000552412 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
CCDC59-206ENST00000552412 NEUROD1Q13562 356 aa9.74□□□□□ -0.85
CCDC59-206ENST00000552412 MPHOSPH9Q99550 1183 aa9.74□□□□□ -0.85
CCDC59-206ENST00000552412 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 MYO5CQ9NQX4 1742 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 RPRD2Q5VT52 1461 aaKnown RBP9.73□□□□□ -0.85
CCDC59-206ENST00000552412 CCDC141Q6ZP82 1450 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
CCDC59-206ENST00000552412 ANKRD30BQ9BXX2 1392 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
CCDC59-206ENST00000552412 SAMD9LQ8IVG5 1584 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 MIER1Q8N108 512 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 ANKRD50Q9ULJ7 1429 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 PZPP20742 1482 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
CCDC59-206ENST00000552412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC59-206ENST00000552412 PLXNC1O60486 1568 aa9.71□□□□□ -0.86
CCDC59-206ENST00000552412 ERCC6L2Q5T890 1561 aa9.71□□□□□ -0.86
CCDC59-206ENST00000552412 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.86
CCDC59-206ENST00000552412 ZCCHC11Q5TAX3 1644 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms