RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 UHRF1BP1Q6BDS2 1440 aa21.88■■□□□ 1.09
SNRPF-204ENST00000552085 CEBPAP49715 358 aaPredicted RBP21.86■■□□□ 1.09
SNRPF-204ENST00000552085 HECW1Q76N89 1606 aa21.84■■□□□ 1.09
SNRPF-204ENST00000552085 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
SNRPF-204ENST00000552085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
SNRPF-204ENST00000552085 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
SNRPF-204ENST00000552085 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
SNRPF-204ENST00000552085 ATP10AO60312 1499 aa21.76■■□□□ 1.07
SNRPF-204ENST00000552085 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SNRPF-204ENST00000552085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.076e-17■■□□□ 13.5
SNRPF-204ENST00000552085 MED1Q15648 1581 aaPredicted RBP21.74■■□□□ 1.07
SNRPF-204ENST00000552085 UBAP1LF5GYI3 381 aa21.73■■□□□ 1.07
SNRPF-204ENST00000552085 C3P01024 1663 aa21.72■■□□□ 1.07
SNRPF-204ENST00000552085 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
SNRPF-204ENST00000552085 NCOA1Q15788 1441 aa21.7■■□□□ 1.06
SNRPF-204ENST00000552085 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
SNRPF-204ENST00000552085 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
SNRPF-204ENST00000552085 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
SNRPF-204ENST00000552085 PRXQ9BXM0 1461 aa21.64■■□□□ 1.06
SNRPF-204ENST00000552085 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
SNRPF-204ENST00000552085 ZNF335Q9H4Z2 1342 aaPredicted RBP21.6■■□□□ 1.05
SNRPF-204ENST00000552085 CAMSAP1Q5T5Y3 1602 aa21.6■■□□□ 1.05
SNRPF-204ENST00000552085 PLCH2O75038 1416 aa21.56■■□□□ 1.04
SNRPF-204ENST00000552085 HSPA1LP34931 641 aa21.56■■□□□ 1.04
SNRPF-204ENST00000552085 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
SNRPF-204ENST00000552085 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
SNRPF-204ENST00000552085 DIP2CQ9Y2E4 1556 aa21.53■■□□□ 1.04
SNRPF-204ENST00000552085 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.04
SNRPF-204ENST00000552085 ZNF518AQ6AHZ1 1483 aa21.52■■□□□ 1.03
SNRPF-204ENST00000552085 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
SNRPF-204ENST00000552085 KDM5CP41229 1560 aa21.51■■□□□ 1.03
SNRPF-204ENST00000552085 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
SNRPF-204ENST00000552085 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
SNRPF-204ENST00000552085 AGLP35573 1532 aa21.49■■□□□ 1.03
SNRPF-204ENST00000552085 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
SNRPF-204ENST00000552085 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
SNRPF-204ENST00000552085 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
SNRPF-204ENST00000552085 PIP4K2BP78356 416 aa21.45■■□□□ 1.02
SNRPF-204ENST00000552085 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
SNRPF-204ENST00000552085 CNTLNQ9NXG0 1405 aa21.45■■□□□ 1.02
SNRPF-204ENST00000552085 NPATQ14207 1427 aa21.44■■□□□ 1.02
SNRPF-204ENST00000552085 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
SNRPF-204ENST00000552085 PKD2Q13563 968 aa21.43■■□□□ 1.02
SNRPF-204ENST00000552085 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
SNRPF-204ENST00000552085 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
SNRPF-204ENST00000552085 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
SNRPF-204ENST00000552085 TOM1O60784 492 aa21.41■■□□□ 1.02
SNRPF-204ENST00000552085 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
SNRPF-204ENST00000552085 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.02
SNRPF-204ENST00000552085 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
SNRPF-204ENST00000552085 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
SNRPF-204ENST00000552085 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
SNRPF-204ENST00000552085 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
SNRPF-204ENST00000552085 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
SNRPF-204ENST00000552085 CEP170BQ9Y4F5 1589 aaPredicted RBP21.34■■□□□ 1.01
SNRPF-204ENST00000552085 CPS1P31327 1500 aa21.34■■□□□ 1.01
SNRPF-204ENST00000552085 KIF14Q15058 1648 aa21.32■■□□□ 1
SNRPF-204ENST00000552085 ZMYM3Q14202 1370 aa21.31■■□□□ 1
SNRPF-204ENST00000552085 KIDINS220Q9ULH0 1771 aa21.29■■□□□ 1
SNRPF-204ENST00000552085 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
SNRPF-204ENST00000552085 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
SNRPF-204ENST00000552085 ALKQ9UM73 1620 aa21.27■■□□□ 1
SNRPF-204ENST00000552085 POLR1AO95602 1720 aaPredicted RBP21.26■□□□□ 0.99
SNRPF-204ENST00000552085 ITSN2Q9NZM3 1697 aa21.26■□□□□ 0.99
SNRPF-204ENST00000552085 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
SNRPF-204ENST00000552085 SHANK2Q9UPX8 1470 aa21.25■□□□□ 0.99
SNRPF-204ENST00000552085 RGS17Q9UGC6 210 aaPredicted RBP21.23■□□□□ 0.99
SNRPF-204ENST00000552085 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
SNRPF-204ENST00000552085 ABCC1P33527 1531 aa21.22■□□□□ 0.99
SNRPF-204ENST00000552085 DNMT1P26358 1616 aaKnown RBP21.2■□□□□ 0.98
SNRPF-204ENST00000552085 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
SNRPF-204ENST00000552085 CDK11AQ9UQ88 783 aaPredicted RBP21.19■□□□□ 0.98
SNRPF-204ENST00000552085 NEURL4Q96JN8 1562 aa21.19■□□□□ 0.98
SNRPF-204ENST00000552085 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
SNRPF-204ENST00000552085 PREX2Q70Z35 1606 aa21.17■□□□□ 0.98
SNRPF-204ENST00000552085 A2ML1A8K2U0 1454 aa21.16■□□□□ 0.98
SNRPF-204ENST00000552085 VWDEQ8N2E2 1590 aa21.15■□□□□ 0.98
SNRPF-204ENST00000552085 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
SNRPF-204ENST00000552085 CLIP1P30622 1438 aa21.13■□□□□ 0.97
SNRPF-204ENST00000552085 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
SNRPF-204ENST00000552085 RNF17Q9BXT8 1623 aaKnown RBP21.08■□□□□ 0.97
SNRPF-204ENST00000552085 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
SNRPF-204ENST00000552085 SETD1AO15047 1707 aaKnown RBP21.07■□□□□ 0.96
SNRPF-204ENST00000552085 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
SNRPF-204ENST00000552085 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
SNRPF-204ENST00000552085 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
SNRPF-204ENST00000552085 FMN1Q68DA7 1419 aa21.05■□□□□ 0.96
SNRPF-204ENST00000552085 CDC42BPAQ5VT25 1732 aa21.05■□□□□ 0.96
SNRPF-204ENST00000552085 SYNMO15061 1565 aa21.02■□□□□ 0.96
SNRPF-204ENST00000552085 GGT6Q6P531 493 aa21.02■□□□□ 0.96
SNRPF-204ENST00000552085 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
SNRPF-204ENST00000552085 A2MP01023 1474 aa21.01■□□□□ 0.95
SNRPF-204ENST00000552085 DEPDC5O75140 1603 aa21.01■□□□□ 0.95
SNRPF-204ENST00000552085 ATP7AQ04656 1500 aa21.01■□□□□ 0.95
SNRPF-204ENST00000552085 LRRC7Q96NW7 1537 aa21.01■□□□□ 0.95
SNRPF-204ENST00000552085 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
SNRPF-204ENST00000552085 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
SNRPF-204ENST00000552085 MED14O60244 1454 aa20.99■□□□□ 0.95
SNRPF-204ENST00000552085 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
SNRPF-204ENST00000552085 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms