RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 MSH5O43196 834 aa30.06■■■□□ 2.4
NPAS3-210ENST00000551492 EHBP1L1Q8N3D4 1523 aa30.06■■■□□ 2.4
NPAS3-210ENST00000551492 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
NPAS3-210ENST00000551492 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
NPAS3-210ENST00000551492 ARHGEF11O15085 1522 aa30.04■■■□□ 2.4
NPAS3-210ENST00000551492 TROQ12816 1431 aaPredicted RBP30.04■■■□□ 2.4
NPAS3-210ENST00000551492 PLEKHG5O94827 1062 aa30.04■■■□□ 2.4
NPAS3-210ENST00000551492 RBM19Q9Y4C8 960 aaKnown RBP30.02■■■□□ 2.4
NPAS3-210ENST00000551492 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
NPAS3-210ENST00000551492 BCANQ96GW7 911 aa29.95■■■□□ 2.39
NPAS3-210ENST00000551492 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.95■■■□□ 2.39
NPAS3-210ENST00000551492 DEKP35659 375 aaKnown RBP29.95■■■□□ 2.39
NPAS3-210ENST00000551492 ABCC2Q92887 1545 aa29.94■■■□□ 2.38
NPAS3-210ENST00000551492 RAB3GAP2Q9H2M9 1393 aa29.92■■■□□ 2.38
NPAS3-210ENST00000551492 NPM1P06748 294 aaKnown RBP eCLIP29.9■■■□□ 2.38
NPAS3-210ENST00000551492 ADCY10Q96PN6 1610 aa29.89■■■□□ 2.38
NPAS3-210ENST00000551492 GPATCH8Q9UKJ3 1502 aaKnown RBP29.88■■■□□ 2.37
NPAS3-210ENST00000551492 PTPN23Q9H3S7 1636 aa29.88■■■□□ 2.37
NPAS3-210ENST00000551492 CLSPNQ9HAW4 1339 aa29.84■■■□□ 2.37
NPAS3-210ENST00000551492 ZCCHC11Q5TAX3 1644 aaKnown RBP29.83■■■□□ 2.37
NPAS3-210ENST00000551492 TRIM52Q96A61 297 aa29.79■■■□□ 2.36
NPAS3-210ENST00000551492 FOXD1Q16676 465 aa29.77■■■□□ 2.36
NPAS3-210ENST00000551492 SETD5Q9C0A6 1442 aa29.75■■■□□ 2.35
NPAS3-210ENST00000551492 TTC37Q6PGP7 1564 aa29.75■■■□□ 2.35
NPAS3-210ENST00000551492 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
NPAS3-210ENST00000551492 SIN3AQ96ST3 1273 aa29.74■■■□□ 2.35
NPAS3-210ENST00000551492 KDM5BQ9UGL1 1544 aa29.73■■■□□ 2.35
NPAS3-210ENST00000551492 ASXL2Q76L83 1435 aa29.73■■■□□ 2.35
NPAS3-210ENST00000551492 DHX57Q6P158 1386 aaKnown RBP29.72■■■□□ 2.35
NPAS3-210ENST00000551492 CAMSAP2Q08AD1 1489 aa29.72■■■□□ 2.35
NPAS3-210ENST00000551492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.71■■■□□ 2.35
NPAS3-210ENST00000551492 MYT1LQ9UL68 1186 aa29.71■■■□□ 2.35
NPAS3-210ENST00000551492 ABCC5O15440 1437 aa29.7■■■□□ 2.35
NPAS3-210ENST00000551492 RIMBP3CA6NJZ7 1639 aa29.7■■■□□ 2.35
NPAS3-210ENST00000551492 RIMBP3BA6NNM3 1639 aa29.7■■■□□ 2.35
NPAS3-210ENST00000551492 RIMBP3Q9UFD9 1639 aa29.7■■■□□ 2.35
NPAS3-210ENST00000551492 AFAP1Q8N556 730 aa29.69■■■□□ 2.34
NPAS3-210ENST00000551492 PKNOX2Q96KN3 472 aa29.69■■■□□ 2.34
NPAS3-210ENST00000551492 CDC42BPAQ5VT25 1732 aa29.68■■■□□ 2.34
NPAS3-210ENST00000551492 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
NPAS3-210ENST00000551492 MIA2Q96PC5 1412 aa29.65■■■□□ 2.34
NPAS3-210ENST00000551492 DAPK1P53355 1430 aa29.65■■■□□ 2.34
NPAS3-210ENST00000551492 RTN4Q9NQC3 1192 aaKnown RBP29.64■■■□□ 2.34
NPAS3-210ENST00000551492 UHRF1BP1LA0JNW5 1464 aa29.63■■■□□ 2.33
NPAS3-210ENST00000551492 KDM6BO15054 1643 aa29.63■■■□□ 2.33
NPAS3-210ENST00000551492 NAIPQ13075 1403 aa29.62■■■□□ 2.33
NPAS3-210ENST00000551492 TSPY4P0CV99 314 aa29.6■■■□□ 2.33
NPAS3-210ENST00000551492 TSPY10P0CW01 314 aa29.6■■■□□ 2.33
NPAS3-210ENST00000551492 TCOF1Q13428 1488 aaKnown RBP29.59■■■□□ 2.33
NPAS3-210ENST00000551492 WDR7Q9Y4E6 1490 aa29.59■■■□□ 2.33
NPAS3-210ENST00000551492 CDC42BPBQ9Y5S2 1711 aa29.58■■■□□ 2.33
NPAS3-210ENST00000551492 EFCAB2Q5VUJ9 269 aa29.56■■■□□ 2.32
NPAS3-210ENST00000551492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.55■■■□□ 2.32
NPAS3-210ENST00000551492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.55■■■□□ 2.32
NPAS3-210ENST00000551492 FAM69CQ0P6D2 419 aa29.54■■■□□ 2.32
NPAS3-210ENST00000551492 DAXXQ9UER7 740 aaPredicted RBP29.54■■■□□ 2.32
NPAS3-210ENST00000551492 ERICH6BQ5W0A0 696 aa29.53■■■□□ 2.32
NPAS3-210ENST00000551492 IL27Q8NEV9 243 aa29.53■■■□□ 2.32
NPAS3-210ENST00000551492 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.31
NPAS3-210ENST00000551492 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.31
NPAS3-210ENST00000551492 SAMD9LQ8IVG5 1584 aa29.5■■■□□ 2.31
NPAS3-210ENST00000551492 HFM1A2PYH4 1435 aa29.5■■■□□ 2.31
NPAS3-210ENST00000551492 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
NPAS3-210ENST00000551492 TRAPPC8Q9Y2L5 1435 aa29.47■■■□□ 2.31
NPAS3-210ENST00000551492 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
NPAS3-210ENST00000551492 PLCH2O75038 1416 aa29.46■■■□□ 2.31
NPAS3-210ENST00000551492 PODXL2Q9NZ53 605 aa29.46■■■□□ 2.31
NPAS3-210ENST00000551492 MBD5Q9P267 1494 aa29.44■■■□□ 2.3
NPAS3-210ENST00000551492 FKBP8Q14318 412 aa29.43■■■□□ 2.3
NPAS3-210ENST00000551492 C9orf84Q5VXU9 1444 aa29.43■■■□□ 2.3
NPAS3-210ENST00000551492 DNMT1P26358 1616 aaKnown RBP29.42■■■□□ 2.3
NPAS3-210ENST00000551492 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
NPAS3-210ENST00000551492 PREX2Q70Z35 1606 aa29.4■■■□□ 2.3
NPAS3-210ENST00000551492 AKNAQ7Z591 1439 aa29.4■■■□□ 2.3
NPAS3-210ENST00000551492 CD109Q6YHK3 1445 aa29.4■■■□□ 2.3
NPAS3-210ENST00000551492 SLC4A1APQ9BWU0 796 aaKnown RBP29.4■■■□□ 2.3
NPAS3-210ENST00000551492 MYO5CQ9NQX4 1742 aa29.39■■■□□ 2.3
NPAS3-210ENST00000551492 MPHOSPH9Q99550 1183 aa29.39■■■□□ 2.29
NPAS3-210ENST00000551492 FANCAO15360 1455 aa29.38■■■□□ 2.29
NPAS3-210ENST00000551492 MAPKBP1O60336 1514 aa29.36■■■□□ 2.29
NPAS3-210ENST00000551492 KIF15Q9NS87 1388 aa29.35■■■□□ 2.29
NPAS3-210ENST00000551492 SCAPERQ9BY12 1400 aa29.35■■■□□ 2.29
NPAS3-210ENST00000551492 ANKRD30AQ9BXX3 1397 aa29.35■■■□□ 2.29
NPAS3-210ENST00000551492 SPAG9O60271 1321 aaKnown RBP29.32■■■□□ 2.28
NPAS3-210ENST00000551492 TSPOAP1O95153 1857 aa29.31■■■□□ 2.28
NPAS3-210ENST00000551492 HIRIP3Q9BW71 556 aaPredicted RBP29.29■■■□□ 2.28
NPAS3-210ENST00000551492 ANKRD50Q9ULJ7 1429 aa29.29■■■□□ 2.28
NPAS3-210ENST00000551492 CCDC141Q6ZP82 1450 aa29.28■■■□□ 2.28
NPAS3-210ENST00000551492 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
NPAS3-210ENST00000551492 NBR1Q14596 966 aa29.28■■■□□ 2.28
NPAS3-210ENST00000551492 NUP155O75694 1391 aa29.26■■■□□ 2.27
NPAS3-210ENST00000551492 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
NPAS3-210ENST00000551492 PKD2Q13563 968 aa29.26■■■□□ 2.27
NPAS3-210ENST00000551492 FANCIQ9NVI1 1328 aa29.24■■■□□ 2.27
NPAS3-210ENST00000551492 DENND4BO75064 1496 aaPredicted RBP29.23■■■□□ 2.27
NPAS3-210ENST00000551492 ROCK1Q13464 1354 aa29.22■■■□□ 2.27
NPAS3-210ENST00000551492 PLEKHH2Q8IVE3 1493 aa29.21■■■□□ 2.27
NPAS3-210ENST00000551492 ABCA9Q8IUA7 1624 aa29.2■■■□□ 2.26
NPAS3-210ENST00000551492 KIF3BO15066 747 aa29.17■■■□□ 2.26
NPAS3-210ENST00000551492 ABCC1P33527 1531 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms