RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 EFCAB2Q5VUJ9 269 aa18.46■□□□□ 0.55
PFDN5-212ENST00000550880 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
PFDN5-212ENST00000550880 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
PFDN5-212ENST00000550880 ATP10AO60312 1499 aa18.42■□□□□ 0.54
PFDN5-212ENST00000550880 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
PFDN5-212ENST00000550880 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
PFDN5-212ENST00000550880 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
PFDN5-212ENST00000550880 C9orf84Q5VXU9 1444 aa18.4■□□□□ 0.54
PFDN5-212ENST00000550880 FER1L4A9Z1Z3 1794 aa18.4■□□□□ 0.54
PFDN5-212ENST00000550880 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
PFDN5-212ENST00000550880 FMN1Q68DA7 1419 aa18.39■□□□□ 0.53
PFDN5-212ENST00000550880 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
PFDN5-212ENST00000550880 CEBPAP49715 358 aaPredicted RBP18.36■□□□□ 0.53
PFDN5-212ENST00000550880 ARHGEF12Q9NZN5 1544 aa18.36■□□□□ 0.53
PFDN5-212ENST00000550880 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
PFDN5-212ENST00000550880 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
PFDN5-212ENST00000550880 CLIP1P30622 1438 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 PREX1Q8TCU6 1659 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
PFDN5-212ENST00000550880 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
PFDN5-212ENST00000550880 KIF14Q15058 1648 aa18.3■□□□□ 0.52
PFDN5-212ENST00000550880 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
PFDN5-212ENST00000550880 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
PFDN5-212ENST00000550880 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
PFDN5-212ENST00000550880 KDM5CP41229 1560 aa18.25■□□□□ 0.51
PFDN5-212ENST00000550880 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
PFDN5-212ENST00000550880 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
PFDN5-212ENST00000550880 PTPRTO14522 1441 aa18.21■□□□□ 0.51
PFDN5-212ENST00000550880 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
PFDN5-212ENST00000550880 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
PFDN5-212ENST00000550880 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
PFDN5-212ENST00000550880 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
PFDN5-212ENST00000550880 AGLP35573 1532 aa18.18■□□□□ 0.5
PFDN5-212ENST00000550880 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
PFDN5-212ENST00000550880 SOCS7O14512 581 aa18.16■□□□□ 0.5
PFDN5-212ENST00000550880 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
PFDN5-212ENST00000550880 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
PFDN5-212ENST00000550880 C3P01024 1663 aa18.15■□□□□ 0.5
PFDN5-212ENST00000550880 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
PFDN5-212ENST00000550880 CDC42BPBQ9Y5S2 1711 aa18.14■□□□□ 0.49
PFDN5-212ENST00000550880 ABCC1P33527 1531 aa18.13■□□□□ 0.49
PFDN5-212ENST00000550880 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
PFDN5-212ENST00000550880 CASKIN1Q8WXD9 1431 aa18.12■□□□□ 0.49
PFDN5-212ENST00000550880 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
PFDN5-212ENST00000550880 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
PFDN5-212ENST00000550880 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
PFDN5-212ENST00000550880 NPATQ14207 1427 aa18.09■□□□□ 0.49
PFDN5-212ENST00000550880 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
PFDN5-212ENST00000550880 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
PFDN5-212ENST00000550880 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.48
PFDN5-212ENST00000550880 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
PFDN5-212ENST00000550880 LTBP4Q8N2S1 1624 aa18.06■□□□□ 0.48
PFDN5-212ENST00000550880 KIDINS220Q9ULH0 1771 aa18.06■□□□□ 0.48
PFDN5-212ENST00000550880 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
PFDN5-212ENST00000550880 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
PFDN5-212ENST00000550880 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
PFDN5-212ENST00000550880 CAMSAP1Q5T5Y3 1602 aa18.04■□□□□ 0.48
PFDN5-212ENST00000550880 PKD2Q13563 968 aa18.03■□□□□ 0.48
PFDN5-212ENST00000550880 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
PFDN5-212ENST00000550880 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.48
PFDN5-212ENST00000550880 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
PFDN5-212ENST00000550880 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
PFDN5-212ENST00000550880 FYCO1Q9BQS8 1478 aa18.01■□□□□ 0.47
PFDN5-212ENST00000550880 CDC42BPAQ5VT25 1732 aa18.01■□□□□ 0.47
PFDN5-212ENST00000550880 UBAP1LF5GYI3 381 aa18.01■□□□□ 0.47
PFDN5-212ENST00000550880 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
PFDN5-212ENST00000550880 SYCP2Q9BX26 1530 aa18■□□□□ 0.47
PFDN5-212ENST00000550880 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
PFDN5-212ENST00000550880 GGT6Q6P531 493 aa18■□□□□ 0.47
PFDN5-212ENST00000550880 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
PFDN5-212ENST00000550880 KIAA1107Q9UPP5 1409 aa17.99■□□□□ 0.47
PFDN5-212ENST00000550880 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
PFDN5-212ENST00000550880 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
PFDN5-212ENST00000550880 A2MP01023 1474 aa17.97■□□□□ 0.47
PFDN5-212ENST00000550880 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
PFDN5-212ENST00000550880 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
PFDN5-212ENST00000550880 PLA2R1Q13018 1463 aa17.96■□□□□ 0.47
PFDN5-212ENST00000550880 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
PFDN5-212ENST00000550880 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
PFDN5-212ENST00000550880 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
PFDN5-212ENST00000550880 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
PFDN5-212ENST00000550880 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
PFDN5-212ENST00000550880 MYO3AQ8NEV4 1616 aa17.91■□□□□ 0.46
PFDN5-212ENST00000550880 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
PFDN5-212ENST00000550880 INO80Q9ULG1 1556 aaPredicted RBP17.9■□□□□ 0.46
PFDN5-212ENST00000550880 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
PFDN5-212ENST00000550880 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
PFDN5-212ENST00000550880 A2ML1A8K2U0 1454 aa17.87■□□□□ 0.45
PFDN5-212ENST00000550880 TOM1O60784 492 aa17.86■□□□□ 0.45
PFDN5-212ENST00000550880 ADGBQ8N7X0 1667 aa17.86■□□□□ 0.45
PFDN5-212ENST00000550880 RTEL1-TNFRSF6BF6WH68 1400 aa17.84■□□□□ 0.45
PFDN5-212ENST00000550880 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
PFDN5-212ENST00000550880 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
PFDN5-212ENST00000550880 KIF3BO15066 747 aa17.83■□□□□ 0.44
PFDN5-212ENST00000550880 PIP4K2BP78356 416 aa17.83■□□□□ 0.44
PFDN5-212ENST00000550880 TNRQ92752 1358 aa17.82■□□□□ 0.44
PFDN5-212ENST00000550880 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms