RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
LGR5-206ENST00000550851 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.06
LGR5-206ENST00000550851 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
LGR5-206ENST00000550851 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
LGR5-206ENST00000550851 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
LGR5-206ENST00000550851 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
LGR5-206ENST00000550851 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
LGR5-206ENST00000550851 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
LGR5-206ENST00000550851 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
LGR5-206ENST00000550851 SOX12O15370 315 aa15.41■□□□□ 0.06
LGR5-206ENST00000550851 U2SURPO15042 1029 aaKnown RBP15.39■□□□□ 0.05
LGR5-206ENST00000550851 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
LGR5-206ENST00000550851 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
LGR5-206ENST00000550851 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
LGR5-206ENST00000550851 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
LGR5-206ENST00000550851 FGD6Q6ZV73 1430 aa15.38■□□□□ 0.05
LGR5-206ENST00000550851 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
LGR5-206ENST00000550851 WASHC2CQ9Y4E1 1318 aa15.36■□□□□ 0.05
LGR5-206ENST00000550851 ST20-MTHFSA0A0A6YYL1 179 aa15.36■□□□□ 0.05
LGR5-206ENST00000550851 CCER2I3L3R5 266 aa15.36■□□□□ 0.05
LGR5-206ENST00000550851 LAS1LQ9Y4W2 734 aaKnown RBP15.36■□□□□ 0.05
LGR5-206ENST00000550851 A0A0G2JS52 829 aa15.36■□□□□ 0.05
LGR5-206ENST00000550851 B4GALNT3Q6L9W6 998 aa15.36■□□□□ 0.05
LGR5-206ENST00000550851 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
LGR5-206ENST00000550851 MYOM3Q5VTT5 1437 aa15.33■□□□□ 0.05
LGR5-206ENST00000550851 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
LGR5-206ENST00000550851 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
LGR5-206ENST00000550851 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
LGR5-206ENST00000550851 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
LGR5-206ENST00000550851 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
LGR5-206ENST00000550851 NUDCQ9Y266 331 aa15.3■□□□□ 0.04
LGR5-206ENST00000550851 UPF2Q9HAU5 1272 aaKnown RBP15.3■□□□□ 0.04
LGR5-206ENST00000550851 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
LGR5-206ENST00000550851 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
LGR5-206ENST00000550851 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
LGR5-206ENST00000550851 AFAP1Q8N556 730 aa15.28■□□□□ 0.04
LGR5-206ENST00000550851 NBR1Q14596 966 aa15.28■□□□□ 0.04
LGR5-206ENST00000550851 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
LGR5-206ENST00000550851 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
LGR5-206ENST00000550851 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.03
LGR5-206ENST00000550851 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
LGR5-206ENST00000550851 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
LGR5-206ENST00000550851 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
LGR5-206ENST00000550851 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
LGR5-206ENST00000550851 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
LGR5-206ENST00000550851 RGS3P49796 1198 aa15.24■□□□□ 0.03
LGR5-206ENST00000550851 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
LGR5-206ENST00000550851 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
LGR5-206ENST00000550851 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
LGR5-206ENST00000550851 HDGFP51858 240 aaKnown RBP15.22■□□□□ 0.03
LGR5-206ENST00000550851 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
LGR5-206ENST00000550851 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
LGR5-206ENST00000550851 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
LGR5-206ENST00000550851 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■□□□□ 11.1
LGR5-206ENST00000550851 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
LGR5-206ENST00000550851 PANK3Q9H999 370 aa15.2■□□□□ 0.02
LGR5-206ENST00000550851 UACAQ9BZF9 1416 aa15.2■□□□□ 0.02
LGR5-206ENST00000550851 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
LGR5-206ENST00000550851 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
LGR5-206ENST00000550851 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
LGR5-206ENST00000550851 FYCO1Q9BQS8 1478 aa15.19■□□□□ 0.02
LGR5-206ENST00000550851 USP47Q96K76 1375 aa15.19■□□□□ 0.02
LGR5-206ENST00000550851 RALBP1Q15311 655 aa15.18■□□□□ 0.02
LGR5-206ENST00000550851 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
LGR5-206ENST00000550851 FAM69CQ0P6D2 419 aa15.18■□□□□ 0.02
LGR5-206ENST00000550851 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
LGR5-206ENST00000550851 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
LGR5-206ENST00000550851 NLRP13Q86W25 1043 aa15.16■□□□□ 0.02
LGR5-206ENST00000550851 ARXQ96QS3 562 aa15.16■□□□□ 0.02
LGR5-206ENST00000550851 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
LGR5-206ENST00000550851 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
LGR5-206ENST00000550851 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
LGR5-206ENST00000550851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■■□ 20.9
LGR5-206ENST00000550851 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
LGR5-206ENST00000550851 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
LGR5-206ENST00000550851 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
LGR5-206ENST00000550851 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
LGR5-206ENST00000550851 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
LGR5-206ENST00000550851 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
LGR5-206ENST00000550851 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
LGR5-206ENST00000550851 KIF7Q2M1P5 1343 aa15.09■□□□□ 0.01
LGR5-206ENST00000550851 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
LGR5-206ENST00000550851 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
LGR5-206ENST00000550851 NBPF8Q3BBV2 869 aa15.08■□□□□ 0.01
LGR5-206ENST00000550851 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
LGR5-206ENST00000550851 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
LGR5-206ENST00000550851 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
LGR5-206ENST00000550851 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0
LGR5-206ENST00000550851 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
LGR5-206ENST00000550851 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
LGR5-206ENST00000550851 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
LGR5-206ENST00000550851 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
LGR5-206ENST00000550851 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
LGR5-206ENST00000550851 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
LGR5-206ENST00000550851 CLUAP1Q96AJ1 413 aa15.05■□□□□ -0
LGR5-206ENST00000550851 EID1Q9Y6B2 187 aa15.05■□□□□ -0
LGR5-206ENST00000550851 PLB1Q6P1J6 1458 aa15.05■□□□□ -0
LGR5-206ENST00000550851 MYBBP1AQ9BQG0 1328 aaKnown RBP15.04■□□□□ -0
LGR5-206ENST00000550851 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
LGR5-206ENST00000550851 RAPGEF3O95398 923 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms