RNA–Protein interactions for RNA: ENST00000550345.5

PFKM-219, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-219ENST00000550345 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
PFKM-219ENST00000550345 DENND4BO75064 1496 aaPredicted RBP15.16■□□□□ 0.02
PFKM-219ENST00000550345 YEATS2Q9ULM3 1422 aa15.16■□□□□ 0.02
PFKM-219ENST00000550345 EFCAB5A4FU69 1503 aa15.15■□□□□ 0.02
PFKM-219ENST00000550345 AKNAQ7Z591 1439 aa15.15■□□□□ 0.02
PFKM-219ENST00000550345 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
PFKM-219ENST00000550345 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
PFKM-219ENST00000550345 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
PFKM-219ENST00000550345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
PFKM-219ENST00000550345 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
PFKM-219ENST00000550345 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
PFKM-219ENST00000550345 CEBPAP49715 358 aaPredicted RBP15.11■□□□□ 0.01
PFKM-219ENST00000550345 ZFYVE16Q7Z3T8 1539 aa15.11■□□□□ 0.01
PFKM-219ENST00000550345 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
PFKM-219ENST00000550345 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
PFKM-219ENST00000550345 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
PFKM-219ENST00000550345 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
PFKM-219ENST00000550345 CFAP74Q9C0B2 1584 aa15.06■□□□□ 0
PFKM-219ENST00000550345 HECW1Q76N89 1606 aa15.06■□□□□ 0
PFKM-219ENST00000550345 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
PFKM-219ENST00000550345 LTBP4Q8N2S1 1624 aa15.05■□□□□ -0
PFKM-219ENST00000550345 MAGI2Q86UL8 1455 aa15.04■□□□□ -0
PFKM-219ENST00000550345 PTPRTO14522 1441 aa15.04■□□□□ -0
PFKM-219ENST00000550345 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
PFKM-219ENST00000550345 CLIP1P30622 1438 aa15.01□□□□□ -0.01
PFKM-219ENST00000550345 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
PFKM-219ENST00000550345 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
PFKM-219ENST00000550345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
PFKM-219ENST00000550345 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
PFKM-219ENST00000550345 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
PFKM-219ENST00000550345 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
PFKM-219ENST00000550345 ATP10AO60312 1499 aa14.99□□□□□ -0.01
PFKM-219ENST00000550345 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
PFKM-219ENST00000550345 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
PFKM-219ENST00000550345 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
PFKM-219ENST00000550345 UBAP1LF5GYI3 381 aa14.95□□□□□ -0.02
PFKM-219ENST00000550345 C3P01024 1663 aa14.94□□□□□ -0.02
PFKM-219ENST00000550345 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
PFKM-219ENST00000550345 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
PFKM-219ENST00000550345 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
PFKM-219ENST00000550345 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
PFKM-219ENST00000550345 ZNF335Q9H4Z2 1342 aaPredicted RBP14.89□□□□□ -0.03
PFKM-219ENST00000550345 PLCH2O75038 1416 aa14.88□□□□□ -0.03
PFKM-219ENST00000550345 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
PFKM-219ENST00000550345 FYCO1Q9BQS8 1478 aa14.87□□□□□ -0.03
PFKM-219ENST00000550345 CAMSAP1Q5T5Y3 1602 aa14.86□□□□□ -0.03
PFKM-219ENST00000550345 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
PFKM-219ENST00000550345 KIF14Q15058 1648 aa14.85□□□□□ -0.03
PFKM-219ENST00000550345 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
PFKM-219ENST00000550345 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
PFKM-219ENST00000550345 HSPA1LP34931 641 aa14.84□□□□□ -0.03
PFKM-219ENST00000550345 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
PFKM-219ENST00000550345 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
PFKM-219ENST00000550345 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.03
PFKM-219ENST00000550345 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.03
PFKM-219ENST00000550345 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
PFKM-219ENST00000550345 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.04
PFKM-219ENST00000550345 CDK11AQ9UQ88 783 aaPredicted RBP14.83□□□□□ -0.04
PFKM-219ENST00000550345 ZNF518AQ6AHZ1 1483 aa14.82□□□□□ -0.04
PFKM-219ENST00000550345 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
PFKM-219ENST00000550345 KDM5CP41229 1560 aa14.81□□□□□ -0.04
PFKM-219ENST00000550345 REREQ9P2R6 1566 aa14.8□□□□□ -0.04
PFKM-219ENST00000550345 ABCA6Q8N139 1617 aa14.8□□□□□ -0.04
PFKM-219ENST00000550345 PIP4K2BP78356 416 aa14.79□□□□□ -0.04
PFKM-219ENST00000550345 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
PFKM-219ENST00000550345 AGLP35573 1532 aa14.77□□□□□ -0.04
PFKM-219ENST00000550345 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
PFKM-219ENST00000550345 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
PFKM-219ENST00000550345 PKD2Q13563 968 aa14.74□□□□□ -0.05
PFKM-219ENST00000550345 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
PFKM-219ENST00000550345 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
PFKM-219ENST00000550345 NPATQ14207 1427 aa14.73□□□□□ -0.05
PFKM-219ENST00000550345 TOM1O60784 492 aa14.72□□□□□ -0.05
PFKM-219ENST00000550345 MROH2AA6NES4 1674 aa14.71□□□□□ -0.05
PFKM-219ENST00000550345 PLA2R1Q13018 1463 aa14.71□□□□□ -0.05
PFKM-219ENST00000550345 CDC42BPBQ9Y5S2 1711 aa14.71□□□□□ -0.05
PFKM-219ENST00000550345 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
PFKM-219ENST00000550345 ZNF142P52746 1687 aaPredicted RBP14.71□□□□□ -0.06
PFKM-219ENST00000550345 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
PFKM-219ENST00000550345 MTUS2Q5JR59 1369 aa14.7□□□□□ -0.06
PFKM-219ENST00000550345 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
PFKM-219ENST00000550345 KIDINS220Q9ULH0 1771 aa14.69□□□□□ -0.06
PFKM-219ENST00000550345 CDC42BPAQ5VT25 1732 aa14.69□□□□□ -0.06
PFKM-219ENST00000550345 PREX2Q70Z35 1606 aa14.68□□□□□ -0.06
PFKM-219ENST00000550345 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
PFKM-219ENST00000550345 CEP170BQ9Y4F5 1589 aaPredicted RBP14.68□□□□□ -0.06
PFKM-219ENST00000550345 GPATCH8Q9UKJ3 1502 aaKnown RBP14.67□□□□□ -0.06
PFKM-219ENST00000550345 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
PFKM-219ENST00000550345 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
PFKM-219ENST00000550345 ITSN2Q9NZM3 1697 aa14.66□□□□□ -0.06
PFKM-219ENST00000550345 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
PFKM-219ENST00000550345 ABCC1P33527 1531 aa14.64□□□□□ -0.07
PFKM-219ENST00000550345 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
PFKM-219ENST00000550345 CPS1P31327 1500 aa14.63□□□□□ -0.07
PFKM-219ENST00000550345 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
PFKM-219ENST00000550345 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
PFKM-219ENST00000550345 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
PFKM-219ENST00000550345 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
PFKM-219ENST00000550345 NCOA2Q15596 1464 aa14.62□□□□□ -0.07
PFKM-219ENST00000550345 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms