RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
ERBB3-214ENST00000550070 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
ERBB3-214ENST00000550070 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
ERBB3-214ENST00000550070 MPHOSPH9Q99550 1183 aa14.26□□□□□ -0.13
ERBB3-214ENST00000550070 AKNAQ7Z591 1439 aa14.25□□□□□ -0.13
ERBB3-214ENST00000550070 WDR62O43379 1518 aa14.25□□□□□ -0.13
ERBB3-214ENST00000550070 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
ERBB3-214ENST00000550070 EPRSP07814 1512 aaKnown RBP14.25□□□□□ -0.13
ERBB3-214ENST00000550070 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
ERBB3-214ENST00000550070 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
ERBB3-214ENST00000550070 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
ERBB3-214ENST00000550070 FOXD1Q16676 465 aa14.24□□□□□ -0.13
ERBB3-214ENST00000550070 CDK13Q14004 1512 aaKnown RBP14.23□□□□□ -0.13
ERBB3-214ENST00000550070 CNTLNQ9NXG0 1405 aa14.23□□□□□ -0.13
ERBB3-214ENST00000550070 MIA2Q96PC5 1412 aa14.22□□□□□ -0.13
ERBB3-214ENST00000550070 IQGAP2Q13576 1575 aa14.2□□□□□ -0.14
ERBB3-214ENST00000550070 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
ERBB3-214ENST00000550070 FBLN2P98095 1184 aa14.2□□□□□ -0.14
ERBB3-214ENST00000550070 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
ERBB3-214ENST00000550070 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
ERBB3-214ENST00000550070 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
ERBB3-214ENST00000550070 MSH5O43196 834 aa14.19□□□□□ -0.14
ERBB3-214ENST00000550070 PRKRIP1Q9H875 184 aaPredicted RBP14.19□□□□□ -0.14
ERBB3-214ENST00000550070 NBPF8Q3BBV2 869 aa14.18□□□□□ -0.14
ERBB3-214ENST00000550070 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
ERBB3-214ENST00000550070 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
ERBB3-214ENST00000550070 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
ERBB3-214ENST00000550070 RPRD2Q5VT52 1461 aaKnown RBP14.16□□□□□ -0.14
ERBB3-214ENST00000550070 DAPK1P53355 1430 aa14.15□□□□□ -0.14
ERBB3-214ENST00000550070 TEX14Q8IWB6 1497 aa14.14□□□□□ -0.15
ERBB3-214ENST00000550070 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
ERBB3-214ENST00000550070 PDIA4P13667 645 aaKnown RBP14.14□□□□□ -0.15
ERBB3-214ENST00000550070 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
ERBB3-214ENST00000550070 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
ERBB3-214ENST00000550070 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
ERBB3-214ENST00000550070 ABCC5O15440 1437 aa14.13□□□□□ -0.15
ERBB3-214ENST00000550070 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
ERBB3-214ENST00000550070 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
ERBB3-214ENST00000550070 SPATA31E1Q6ZUB1 1445 aa14.12□□□□□ -0.15
ERBB3-214ENST00000550070 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
ERBB3-214ENST00000550070 FANCIQ9NVI1 1328 aa14.12□□□□□ -0.15
ERBB3-214ENST00000550070 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
ERBB3-214ENST00000550070 KIF7Q2M1P5 1343 aa14.11□□□□□ -0.15
ERBB3-214ENST00000550070 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
ERBB3-214ENST00000550070 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
ERBB3-214ENST00000550070 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
ERBB3-214ENST00000550070 ZBED9Q6R2W3 1325 aa14.11□□□□□ -0.15
ERBB3-214ENST00000550070 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
ERBB3-214ENST00000550070 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
ERBB3-214ENST00000550070 PKNOX2Q96KN3 472 aa14.09□□□□□ -0.15
ERBB3-214ENST00000550070 KCNA4P22459 653 aa14.08□□□□□ -0.15
ERBB3-214ENST00000550070 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
ERBB3-214ENST00000550070 B4GALNT3Q6L9W6 998 aa14.06□□□□□ -0.16
ERBB3-214ENST00000550070 DISP1Q96F81 1524 aa14.06□□□□□ -0.16
ERBB3-214ENST00000550070 KIAA0556O60303 1618 aa14.05□□□□□ -0.16
ERBB3-214ENST00000550070 PZPP20742 1482 aa14.05□□□□□ -0.16
ERBB3-214ENST00000550070 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
ERBB3-214ENST00000550070 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.16
ERBB3-214ENST00000550070 DHX29Q7Z478 1369 aaKnown RBP14.02□□□□□ -0.16
ERBB3-214ENST00000550070 KIAA0586Q9BVV6 1533 aa14.02□□□□□ -0.17
ERBB3-214ENST00000550070 BCORL1Q5H9F3 1711 aa14.02□□□□□ -0.17
ERBB3-214ENST00000550070 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-214ENST00000550070 MBD5Q9P267 1494 aa14.01□□□□□ -0.17
ERBB3-214ENST00000550070 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
ERBB3-214ENST00000550070 CAMSAP2Q08AD1 1489 aa14□□□□□ -0.17
ERBB3-214ENST00000550070 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
ERBB3-214ENST00000550070 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
ERBB3-214ENST00000550070 PDE4CQ08493 712 aa13.99□□□□□ -0.17
ERBB3-214ENST00000550070 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
ERBB3-214ENST00000550070 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
ERBB3-214ENST00000550070 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-214ENST00000550070 USP47Q96K76 1375 aa13.98□□□□□ -0.17
ERBB3-214ENST00000550070 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
ERBB3-214ENST00000550070 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
ERBB3-214ENST00000550070 POLR3GLQ9BT43 218 aa13.97□□□□□ -0.17
ERBB3-214ENST00000550070 TROQ12816 1431 aaPredicted RBP13.97□□□□□ -0.17
ERBB3-214ENST00000550070 PKD2Q13563 968 aa13.96□□□□□ -0.17
ERBB3-214ENST00000550070 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
ERBB3-214ENST00000550070 KDM5CP41229 1560 aa13.96□□□□□ -0.18
ERBB3-214ENST00000550070 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.18
ERBB3-214ENST00000550070 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
ERBB3-214ENST00000550070 KIF14Q15058 1648 aa13.95□□□□□ -0.18
ERBB3-214ENST00000550070 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
ERBB3-214ENST00000550070 ADGRL2O95490 1459 aa13.95□□□□□ -0.18
ERBB3-214ENST00000550070 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
ERBB3-214ENST00000550070 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
ERBB3-214ENST00000550070 RNF123Q5XPI4 1314 aa13.93□□□□□ -0.18
ERBB3-214ENST00000550070 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
ERBB3-214ENST00000550070 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
ERBB3-214ENST00000550070 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
ERBB3-214ENST00000550070 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
ERBB3-214ENST00000550070 PNISRQ8TF01 805 aaKnown RBP13.91□□□□□ -0.18
ERBB3-214ENST00000550070 ANKRD30AQ9BXX3 1397 aa13.91□□□□□ -0.18
ERBB3-214ENST00000550070 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.18
ERBB3-214ENST00000550070 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
ERBB3-214ENST00000550070 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
ERBB3-214ENST00000550070 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
ERBB3-214ENST00000550070 RALGAPBQ86X10 1494 aa13.88□□□□□ -0.19
ERBB3-214ENST00000550070 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
ERBB3-214ENST00000550070 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms