RNA–Protein interactions for RNA: ENST00000549524.1

TCHP-207, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 3,428 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-207ENST00000549524 ARHGEF5Q12774 1597 aa12.2□□□□□ -0.46
TCHP-207ENST00000549524 ANP32CO43423 234 aa12.2□□□□□ -0.46
TCHP-207ENST00000549524 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
TCHP-207ENST00000549524 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
TCHP-207ENST00000549524 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
TCHP-207ENST00000549524 MAST1Q9Y2H9 1570 aa12.19□□□□□ -0.46
TCHP-207ENST00000549524 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
TCHP-207ENST00000549524 NAIPQ13075 1403 aa12.18□□□□□ -0.46
TCHP-207ENST00000549524 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
TCHP-207ENST00000549524 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
TCHP-207ENST00000549524 KDM6BO15054 1643 aa12.17□□□□□ -0.46
TCHP-207ENST00000549524 POLR1AO95602 1720 aaPredicted RBP12.17□□□□□ -0.46
TCHP-207ENST00000549524 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
TCHP-207ENST00000549524 KDM5DQ9BY66 1539 aa12.17□□□□□ -0.46
TCHP-207ENST00000549524 TROQ12816 1431 aaPredicted RBP12.16□□□□□ -0.46
TCHP-207ENST00000549524 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
TCHP-207ENST00000549524 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
TCHP-207ENST00000549524 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
TCHP-207ENST00000549524 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
TCHP-207ENST00000549524 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
TCHP-207ENST00000549524 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
TCHP-207ENST00000549524 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
TCHP-207ENST00000549524 MTUS2Q5JR59 1369 aa12.13□□□□□ -0.47
TCHP-207ENST00000549524 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
TCHP-207ENST00000549524 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
TCHP-207ENST00000549524 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
TCHP-207ENST00000549524 ABCC2Q92887 1545 aa12.12□□□□□ -0.47
TCHP-207ENST00000549524 PLB1Q6P1J6 1458 aa12.12□□□□□ -0.47
TCHP-207ENST00000549524 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
TCHP-207ENST00000549524 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
TCHP-207ENST00000549524 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
TCHP-207ENST00000549524 DAPK1P53355 1430 aa12.11□□□□□ -0.47
TCHP-207ENST00000549524 PLXNC1O60486 1568 aa12.11□□□□□ -0.47
TCHP-207ENST00000549524 ATP10BO94823 1461 aa12.1□□□□□ -0.47
TCHP-207ENST00000549524 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
TCHP-207ENST00000549524 ZCCHC11Q5TAX3 1644 aaKnown RBP12.1□□□□□ -0.47
TCHP-207ENST00000549524 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
TCHP-207ENST00000549524 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
TCHP-207ENST00000549524 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
TCHP-207ENST00000549524 UNC13BO14795 1591 aa12.07□□□□□ -0.48
TCHP-207ENST00000549524 ABCC5O15440 1437 aa12.07□□□□□ -0.48
TCHP-207ENST00000549524 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
TCHP-207ENST00000549524 FBLN2P98095 1184 aa12.05□□□□□ -0.48
TCHP-207ENST00000549524 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
TCHP-207ENST00000549524 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCHP-207ENST00000549524 TONSLQ96HA7 1378 aa12.03□□□□□ -0.48
TCHP-207ENST00000549524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCHP-207ENST00000549524 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.48
TCHP-207ENST00000549524 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.48
TCHP-207ENST00000549524 MBD5Q9P267 1494 aa12.02□□□□□ -0.49
TCHP-207ENST00000549524 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
TCHP-207ENST00000549524 PTPRGP23470 1445 aa12.01□□□□□ -0.49
TCHP-207ENST00000549524 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
TCHP-207ENST00000549524 DEPDC5O75140 1603 aa12□□□□□ -0.49
TCHP-207ENST00000549524 IRX6P78412 446 aaPredicted RBP12□□□□□ -0.49
TCHP-207ENST00000549524 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
TCHP-207ENST00000549524 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
TCHP-207ENST00000549524 MSH5O43196 834 aa12□□□□□ -0.49
TCHP-207ENST00000549524 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
TCHP-207ENST00000549524 PZPP20742 1482 aa11.99□□□□□ -0.49
TCHP-207ENST00000549524 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
TCHP-207ENST00000549524 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
TCHP-207ENST00000549524 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
TCHP-207ENST00000549524 TEX14Q8IWB6 1497 aa11.97□□□□□ -0.49
TCHP-207ENST00000549524 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.5
TCHP-207ENST00000549524 ABCC1P33527 1531 aa11.95□□□□□ -0.5
TCHP-207ENST00000549524 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
TCHP-207ENST00000549524 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
TCHP-207ENST00000549524 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
TCHP-207ENST00000549524 LAMC1P11047 1609 aa11.94□□□□□ -0.5
TCHP-207ENST00000549524 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
TCHP-207ENST00000549524 EIF2AK4Q9P2K8 1649 aaKnown RBP11.94□□□□□ -0.5
TCHP-207ENST00000549524 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
TCHP-207ENST00000549524 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
TCHP-207ENST00000549524 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
TCHP-207ENST00000549524 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
TCHP-207ENST00000549524 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
TCHP-207ENST00000549524 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
TCHP-207ENST00000549524 CCDC141Q6ZP82 1450 aa11.9□□□□□ -0.5
TCHP-207ENST00000549524 ANKRD30BQ9BXX2 1392 aa11.89□□□□□ -0.51
TCHP-207ENST00000549524 ATP10AO60312 1499 aa11.89□□□□□ -0.51
TCHP-207ENST00000549524 CFAP74Q9C0B2 1584 aa11.89□□□□□ -0.51
TCHP-207ENST00000549524 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
TCHP-207ENST00000549524 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
TCHP-207ENST00000549524 FAM9BQ8IZU0 186 aa11.86□□□□□ -0.51
TCHP-207ENST00000549524 E9PCH4 1651 aa11.86□□□□□ -0.51
TCHP-207ENST00000549524 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
TCHP-207ENST00000549524 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
TCHP-207ENST00000549524 CEP152O94986 1710 aa11.85□□□□□ -0.51
TCHP-207ENST00000549524 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
TCHP-207ENST00000549524 PLCH2O75038 1416 aa11.85□□□□□ -0.51
TCHP-207ENST00000549524 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
TCHP-207ENST00000549524 EIF4G2P78344 907 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCHP-207ENST00000549524 HSPA5P11021 654 aaKnown RBP11.84□□□□□ -0.51
TCHP-207ENST00000549524 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
TCHP-207ENST00000549524 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
TCHP-207ENST00000549524 KDM5CP41229 1560 aa11.83□□□□□ -0.51
TCHP-207ENST00000549524 ERBINQ96RT1 1412 aa11.83□□□□□ -0.51
TCHP-207ENST00000549524 RTEL1-TNFRSF6BF6WH68 1400 aa11.83□□□□□ -0.52
TCHP-207ENST00000549524 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms