RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
VDR-206ENST00000549336 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
VDR-206ENST00000549336 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
VDR-206ENST00000549336 NCOA2Q15596 1464 aa15.83■□□□□ 0.13
VDR-206ENST00000549336 TMC1Q8TDI8 760 aa15.83■□□□□ 0.13
VDR-206ENST00000549336 ARHGAP5Q13017 1502 aa15.82■□□□□ 0.12
VDR-206ENST00000549336 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
VDR-206ENST00000549336 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
VDR-206ENST00000549336 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
VDR-206ENST00000549336 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
VDR-206ENST00000549336 KIF15Q9NS87 1388 aa15.77■□□□□ 0.12
VDR-206ENST00000549336 KNSTRNQ9Y448 316 aa15.75■□□□□ 0.11
VDR-206ENST00000549336 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
VDR-206ENST00000549336 TMF1P82094 1093 aa15.75■□□□□ 0.11
VDR-206ENST00000549336 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
VDR-206ENST00000549336 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
VDR-206ENST00000549336 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
VDR-206ENST00000549336 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
VDR-206ENST00000549336 WDR97A6NE52 1622 aa15.74■□□□□ 0.11
VDR-206ENST00000549336 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
VDR-206ENST00000549336 FOXD1Q16676 465 aa15.73■□□□□ 0.11
VDR-206ENST00000549336 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
VDR-206ENST00000549336 CFAP53Q96M91 514 aa15.71■□□□□ 0.11
VDR-206ENST00000549336 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.1
VDR-206ENST00000549336 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
VDR-206ENST00000549336 ANKRD50Q9ULJ7 1429 aa15.7■□□□□ 0.1
VDR-206ENST00000549336 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
VDR-206ENST00000549336 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
VDR-206ENST00000549336 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
VDR-206ENST00000549336 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
VDR-206ENST00000549336 CD109Q6YHK3 1445 aa15.69■□□□□ 0.1
VDR-206ENST00000549336 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
VDR-206ENST00000549336 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
VDR-206ENST00000549336 TIAM1Q13009 1591 aa15.68■□□□□ 0.1
VDR-206ENST00000549336 EIF3AQ14152 1382 aaKnown RBP15.68■□□□□ 0.1
VDR-206ENST00000549336 MYT1Q01538 1121 aa15.67■□□□□ 0.1
VDR-206ENST00000549336 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
VDR-206ENST00000549336 SCAPERQ9BY12 1400 aa15.67■□□□□ 0.1
VDR-206ENST00000549336 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
VDR-206ENST00000549336 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
VDR-206ENST00000549336 ERICH6Q7L0X2 663 aa15.65■□□□□ 0.1
VDR-206ENST00000549336 STK26Q9P289 416 aa15.65■□□□□ 0.1
VDR-206ENST00000549336 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
VDR-206ENST00000549336 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.64■□□□□ 0.09
VDR-206ENST00000549336 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
VDR-206ENST00000549336 CDK13Q14004 1512 aaKnown RBP15.64■□□□□ 0.09
VDR-206ENST00000549336 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
VDR-206ENST00000549336 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
VDR-206ENST00000549336 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
VDR-206ENST00000549336 NUP160Q12769 1436 aa15.63■□□□□ 0.09
VDR-206ENST00000549336 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
VDR-206ENST00000549336 ZBTB7CA1YPR0 619 aa15.62■□□□□ 0.09
VDR-206ENST00000549336 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
VDR-206ENST00000549336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
VDR-206ENST00000549336 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
VDR-206ENST00000549336 UGGT2Q9NYU1 1516 aa15.61■□□□□ 0.09
VDR-206ENST00000549336 HDGFL2Q7Z4V5 671 aaPredicted RBP15.6■□□□□ 0.09
VDR-206ENST00000549336 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
VDR-206ENST00000549336 KIF14Q15058 1648 aa15.59■□□□□ 0.09
VDR-206ENST00000549336 RAPGEF3O95398 923 aa15.59■□□□□ 0.09
VDR-206ENST00000549336 PCF11O94913 1555 aaKnown RBP15.59■□□□□ 0.09
VDR-206ENST00000549336 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
VDR-206ENST00000549336 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
VDR-206ENST00000549336 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
VDR-206ENST00000549336 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
VDR-206ENST00000549336 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
VDR-206ENST00000549336 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
VDR-206ENST00000549336 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
VDR-206ENST00000549336 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
VDR-206ENST00000549336 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
VDR-206ENST00000549336 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
VDR-206ENST00000549336 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
VDR-206ENST00000549336 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
VDR-206ENST00000549336 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
VDR-206ENST00000549336 HSPA5P11021 654 aaKnown RBP15.53■□□□□ 0.08
VDR-206ENST00000549336 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
VDR-206ENST00000549336 TEX14Q8IWB6 1497 aa15.52■□□□□ 0.08
VDR-206ENST00000549336 DAPK1P53355 1430 aa15.52■□□□□ 0.08
VDR-206ENST00000549336 SLC52A1Q9NWF4 448 aa15.52■□□□□ 0.07
VDR-206ENST00000549336 TERF2IPQ9NYB0 399 aa15.52■□□□□ 0.07
VDR-206ENST00000549336 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
VDR-206ENST00000549336 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
VDR-206ENST00000549336 RAPGEF6Q8TEU7 1601 aa15.51■□□□□ 0.07
VDR-206ENST00000549336 DENND4BO75064 1496 aaPredicted RBP15.51■□□□□ 0.07
VDR-206ENST00000549336 NUTM2DQ5VT03 806 aaPredicted RBP15.51■□□□□ 0.07
VDR-206ENST00000549336 HFM1A2PYH4 1435 aa15.5■□□□□ 0.07
VDR-206ENST00000549336 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
VDR-206ENST00000549336 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
VDR-206ENST00000549336 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
VDR-206ENST00000549336 ATP10BO94823 1461 aa15.5■□□□□ 0.07
VDR-206ENST00000549336 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.5■□□□□ 0.07
VDR-206ENST00000549336 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
VDR-206ENST00000549336 FANCAO15360 1455 aa15.49■□□□□ 0.07
VDR-206ENST00000549336 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
VDR-206ENST00000549336 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
VDR-206ENST00000549336 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
VDR-206ENST00000549336 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
VDR-206ENST00000549336 A0A0G2JS52 829 aa15.47■□□□□ 0.07
VDR-206ENST00000549336 WDR7Q9Y4E6 1490 aa15.47■□□□□ 0.07
VDR-206ENST00000549336 TRAK1Q9UPV9 953 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms