RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
CALCOCO1-212ENST00000549173 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-212ENST00000549173 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
CALCOCO1-212ENST00000549173 CERKQ8TCT0 537 aa16.42■□□□□ 0.22
CALCOCO1-212ENST00000549173 EFCAB2Q5VUJ9 269 aa16.41■□□□□ 0.22
CALCOCO1-212ENST00000549173 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
CALCOCO1-212ENST00000549173 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
CALCOCO1-212ENST00000549173 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
CALCOCO1-212ENST00000549173 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-212ENST00000549173 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
CALCOCO1-212ENST00000549173 MLECQ14165 292 aa16.38■□□□□ 0.21
CALCOCO1-212ENST00000549173 KDM5CP41229 1560 aa16.37■□□□□ 0.21
CALCOCO1-212ENST00000549173 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
CALCOCO1-212ENST00000549173 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
CALCOCO1-212ENST00000549173 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
CALCOCO1-212ENST00000549173 KIF14Q15058 1648 aa16.34■□□□□ 0.21
CALCOCO1-212ENST00000549173 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO1-212ENST00000549173 CLIP1P30622 1438 aa16.32■□□□□ 0.2
CALCOCO1-212ENST00000549173 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
CALCOCO1-212ENST00000549173 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
CALCOCO1-212ENST00000549173 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
CALCOCO1-212ENST00000549173 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-212ENST00000549173 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
CALCOCO1-212ENST00000549173 STRCQ7RTU9 1775 aa16.3■□□□□ 0.2
CALCOCO1-212ENST00000549173 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
CALCOCO1-212ENST00000549173 AGLP35573 1532 aa16.29■□□□□ 0.2
CALCOCO1-212ENST00000549173 CEBPAP49715 358 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO1-212ENST00000549173 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
CALCOCO1-212ENST00000549173 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO1-212ENST00000549173 PTPRTO14522 1441 aa16.28■□□□□ 0.2
CALCOCO1-212ENST00000549173 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
CALCOCO1-212ENST00000549173 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
CALCOCO1-212ENST00000549173 ABCA6Q8N139 1617 aa16.24■□□□□ 0.19
CALCOCO1-212ENST00000549173 ABCC1P33527 1531 aa16.24■□□□□ 0.19
CALCOCO1-212ENST00000549173 C3P01024 1663 aa16.24■□□□□ 0.19
CALCOCO1-212ENST00000549173 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
CALCOCO1-212ENST00000549173 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
CALCOCO1-212ENST00000549173 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
CALCOCO1-212ENST00000549173 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
CALCOCO1-212ENST00000549173 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
CALCOCO1-212ENST00000549173 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
CALCOCO1-212ENST00000549173 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
CALCOCO1-212ENST00000549173 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
CALCOCO1-212ENST00000549173 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
CALCOCO1-212ENST00000549173 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
CALCOCO1-212ENST00000549173 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
CALCOCO1-212ENST00000549173 DISP3Q9P2K9 1392 aa16.17■□□□□ 0.18
CALCOCO1-212ENST00000549173 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
CALCOCO1-212ENST00000549173 NPATQ14207 1427 aa16.17■□□□□ 0.18
CALCOCO1-212ENST00000549173 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
CALCOCO1-212ENST00000549173 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
CALCOCO1-212ENST00000549173 SOCS7O14512 581 aa16.14■□□□□ 0.17
CALCOCO1-212ENST00000549173 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
CALCOCO1-212ENST00000549173 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
CALCOCO1-212ENST00000549173 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
CALCOCO1-212ENST00000549173 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
CALCOCO1-212ENST00000549173 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
CALCOCO1-212ENST00000549173 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
CALCOCO1-212ENST00000549173 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
CALCOCO1-212ENST00000549173 KIAA1107Q9UPP5 1409 aa16.1■□□□□ 0.17
CALCOCO1-212ENST00000549173 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
CALCOCO1-212ENST00000549173 ZMYM3Q14202 1370 aa16.09■□□□□ 0.17
CALCOCO1-212ENST00000549173 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
CALCOCO1-212ENST00000549173 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
CALCOCO1-212ENST00000549173 GPATCH8Q9UKJ3 1502 aaKnown RBP16.08■□□□□ 0.16
CALCOCO1-212ENST00000549173 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
CALCOCO1-212ENST00000549173 SYCP2Q9BX26 1530 aa16.07■□□□□ 0.16
CALCOCO1-212ENST00000549173 PLXNC1O60486 1568 aa16.07■□□□□ 0.16
CALCOCO1-212ENST00000549173 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO1-212ENST00000549173 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
CALCOCO1-212ENST00000549173 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO1-212ENST00000549173 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
CALCOCO1-212ENST00000549173 PKD2Q13563 968 aa16.04■□□□□ 0.16
CALCOCO1-212ENST00000549173 A2MP01023 1474 aa16.03■□□□□ 0.16
CALCOCO1-212ENST00000549173 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-212ENST00000549173 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO1-212ENST00000549173 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
CALCOCO1-212ENST00000549173 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-212ENST00000549173 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
CALCOCO1-212ENST00000549173 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.15
CALCOCO1-212ENST00000549173 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO1-212ENST00000549173 HNRNPMP52272 730 aaKnown RBP eCLIP16.01■□□□□ 0.15
CALCOCO1-212ENST00000549173 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-212ENST00000549173 NCKAP5LQ9HCH0 1330 aa15.99■□□□□ 0.15
CALCOCO1-212ENST00000549173 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
CALCOCO1-212ENST00000549173 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
CALCOCO1-212ENST00000549173 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO1-212ENST00000549173 RTEL1-TNFRSF6BF6WH68 1400 aa15.96■□□□□ 0.15
CALCOCO1-212ENST00000549173 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
CALCOCO1-212ENST00000549173 GGT6Q6P531 493 aa15.95■□□□□ 0.14
CALCOCO1-212ENST00000549173 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
CALCOCO1-212ENST00000549173 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
CALCOCO1-212ENST00000549173 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
CALCOCO1-212ENST00000549173 MTUS2Q5JR59 1369 aa15.93■□□□□ 0.14
CALCOCO1-212ENST00000549173 DNMT1P26358 1616 aaKnown RBP15.92■□□□□ 0.14
CALCOCO1-212ENST00000549173 DHX29Q7Z478 1369 aaKnown RBP15.91■□□□□ 0.14
CALCOCO1-212ENST00000549173 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
CALCOCO1-212ENST00000549173 CPS1P31327 1500 aa15.9■□□□□ 0.14
CALCOCO1-212ENST00000549173 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
CALCOCO1-212ENST00000549173 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms