RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
LETMD1-217ENST00000548516 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
LETMD1-217ENST00000548516 PLCH2O75038 1416 aa15.49■□□□□ 0.07
LETMD1-217ENST00000548516 CFAP74Q9C0B2 1584 aa15.48■□□□□ 0.07
LETMD1-217ENST00000548516 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
LETMD1-217ENST00000548516 MAGI2Q86UL8 1455 aa15.46■□□□□ 0.07
LETMD1-217ENST00000548516 HECW1Q76N89 1606 aa15.46■□□□□ 0.06
LETMD1-217ENST00000548516 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
LETMD1-217ENST00000548516 AFAP1Q8N556 730 aa15.45■□□□□ 0.06
LETMD1-217ENST00000548516 ATP10AO60312 1499 aa15.44■□□□□ 0.06
LETMD1-217ENST00000548516 SIGLEC1Q9BZZ2 1709 aa15.41■□□□□ 0.06
LETMD1-217ENST00000548516 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
LETMD1-217ENST00000548516 FMN1Q68DA7 1419 aa15.41■□□□□ 0.06
LETMD1-217ENST00000548516 ESF1Q9H501 851 aaKnown RBP15.39■□□□□ 0.05
LETMD1-217ENST00000548516 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
LETMD1-217ENST00000548516 ARHGAP35Q9NRY4 1499 aa15.37■□□□□ 0.05
LETMD1-217ENST00000548516 ARHGAP5Q13017 1502 aa15.37■□□□□ 0.05
LETMD1-217ENST00000548516 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
LETMD1-217ENST00000548516 CLIP1P30622 1438 aa15.36■□□□□ 0.05
LETMD1-217ENST00000548516 TROQ12816 1431 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-217ENST00000548516 ARHGEF12Q9NZN5 1544 aa15.36■□□□□ 0.05
LETMD1-217ENST00000548516 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.05
LETMD1-217ENST00000548516 KIF14Q15058 1648 aa15.33■□□□□ 0.04
LETMD1-217ENST00000548516 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
LETMD1-217ENST00000548516 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
LETMD1-217ENST00000548516 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
LETMD1-217ENST00000548516 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
LETMD1-217ENST00000548516 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
LETMD1-217ENST00000548516 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
LETMD1-217ENST00000548516 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.03
LETMD1-217ENST00000548516 KDM5CP41229 1560 aa15.25■□□□□ 0.03
LETMD1-217ENST00000548516 DIP2CQ9Y2E4 1556 aa15.25■□□□□ 0.03
LETMD1-217ENST00000548516 ILDR2Q71H61 639 aa15.25■□□□□ 0.03
LETMD1-217ENST00000548516 MLH3Q9UHC1 1453 aa15.25■□□□□ 0.03
LETMD1-217ENST00000548516 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
LETMD1-217ENST00000548516 CASKIN1Q8WXD9 1431 aa15.22■□□□□ 0.03
LETMD1-217ENST00000548516 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
LETMD1-217ENST00000548516 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
LETMD1-217ENST00000548516 PTPRTO14522 1441 aa15.21■□□□□ 0.03
LETMD1-217ENST00000548516 STRCQ7RTU9 1775 aa15.21■□□□□ 0.02
LETMD1-217ENST00000548516 ABCA6Q8N139 1617 aa15.21■□□□□ 0.02
LETMD1-217ENST00000548516 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
LETMD1-217ENST00000548516 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
LETMD1-217ENST00000548516 NCKAP5LQ9HCH0 1330 aa15.19■□□□□ 0.02
LETMD1-217ENST00000548516 ABCC1P33527 1531 aa15.19■□□□□ 0.02
LETMD1-217ENST00000548516 GGT6Q6P531 493 aa15.19■□□□□ 0.02
LETMD1-217ENST00000548516 AGLP35573 1532 aa15.18■□□□□ 0.02
LETMD1-217ENST00000548516 LRRIQ1Q96JM4 1722 aa15.18■□□□□ 0.02
LETMD1-217ENST00000548516 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
LETMD1-217ENST00000548516 ZMYM3Q14202 1370 aa15.18■□□□□ 0.02
LETMD1-217ENST00000548516 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
LETMD1-217ENST00000548516 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
LETMD1-217ENST00000548516 C3P01024 1663 aa15.17■□□□□ 0.02
LETMD1-217ENST00000548516 SOCS7O14512 581 aa15.16■□□□□ 0.02
LETMD1-217ENST00000548516 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
LETMD1-217ENST00000548516 NCOA1Q15788 1441 aa15.15■□□□□ 0.02
LETMD1-217ENST00000548516 ITSN2Q9NZM3 1697 aa15.14■□□□□ 0.01
LETMD1-217ENST00000548516 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
LETMD1-217ENST00000548516 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
LETMD1-217ENST00000548516 UBAP1LF5GYI3 381 aa15.13■□□□□ 0.01
LETMD1-217ENST00000548516 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
LETMD1-217ENST00000548516 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
LETMD1-217ENST00000548516 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
LETMD1-217ENST00000548516 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
LETMD1-217ENST00000548516 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
LETMD1-217ENST00000548516 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
LETMD1-217ENST00000548516 NPATQ14207 1427 aa15.1■□□□□ 0.01
LETMD1-217ENST00000548516 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
LETMD1-217ENST00000548516 ZNF644Q9H582 1327 aaPredicted RBP15.1■□□□□ 0.01
LETMD1-217ENST00000548516 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
LETMD1-217ENST00000548516 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
LETMD1-217ENST00000548516 A2MP01023 1474 aa15.08■□□□□ 0.01
LETMD1-217ENST00000548516 PKD2Q13563 968 aa15.08■□□□□ 0
LETMD1-217ENST00000548516 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
LETMD1-217ENST00000548516 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
LETMD1-217ENST00000548516 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
LETMD1-217ENST00000548516 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
LETMD1-217ENST00000548516 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
LETMD1-217ENST00000548516 ATP7AQ04656 1500 aa15.06■□□□□ 0
LETMD1-217ENST00000548516 PTPRKQ15262 1439 aa15.05■□□□□ -0
LETMD1-217ENST00000548516 SPATA31D1Q6ZQQ2 1576 aa15.05■□□□□ -0
LETMD1-217ENST00000548516 IQSEC2Q5JU85 1478 aa15.03■□□□□ -0
LETMD1-217ENST00000548516 KIF3BO15066 747 aa15.03■□□□□ -0
LETMD1-217ENST00000548516 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
LETMD1-217ENST00000548516 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
LETMD1-217ENST00000548516 PIP4K2BP78356 416 aa15.02■□□□□ -0
LETMD1-217ENST00000548516 MROH2AA6NES4 1674 aa15.01□□□□□ -0.01
LETMD1-217ENST00000548516 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
LETMD1-217ENST00000548516 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
LETMD1-217ENST00000548516 PLXNC1O60486 1568 aa14.98□□□□□ -0.01
LETMD1-217ENST00000548516 INO80Q9ULG1 1556 aaPredicted RBP14.98□□□□□ -0.01
LETMD1-217ENST00000548516 DHX29Q7Z478 1369 aaKnown RBP14.98□□□□□ -0.01
LETMD1-217ENST00000548516 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
LETMD1-217ENST00000548516 TCOF1Q13428 1488 aaKnown RBP14.97□□□□□ -0.01
LETMD1-217ENST00000548516 MYO3AQ8NEV4 1616 aa14.97□□□□□ -0.01
LETMD1-217ENST00000548516 TNRQ92752 1358 aa14.97□□□□□ -0.01
LETMD1-217ENST00000548516 HSPA1LP34931 641 aa14.96□□□□□ -0.01
LETMD1-217ENST00000548516 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
LETMD1-217ENST00000548516 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
LETMD1-217ENST00000548516 TOM1O60784 492 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms