RNA–Protein interactions for RNA: ENST00000548210.1

LINC02400-201, Transcript of long intergenic non-protein coding RNA 2400, humanhuman

TSL 2 BASIC

Gene LINC02400, Length 351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02400-201ENST00000548210 C3P01024 1663 aa11.33□□□□□ -0.6
LINC02400-201ENST00000548210 HSPA1LP34931 641 aa11.32□□□□□ -0.6
LINC02400-201ENST00000548210 MLECQ14165 292 aa11.32□□□□□ -0.6
LINC02400-201ENST00000548210 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
LINC02400-201ENST00000548210 C9orf84Q5VXU9 1444 aa11.29□□□□□ -0.6
LINC02400-201ENST00000548210 PHF23Q9BUL5 403 aaPredicted RBP11.29□□□□□ -0.6
LINC02400-201ENST00000548210 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
LINC02400-201ENST00000548210 ATP10AO60312 1499 aa11.28□□□□□ -0.6
LINC02400-201ENST00000548210 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.6
LINC02400-201ENST00000548210 TRAPPC8Q9Y2L5 1435 aa11.25□□□□□ -0.61
LINC02400-201ENST00000548210 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
LINC02400-201ENST00000548210 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
LINC02400-201ENST00000548210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC02400-201ENST00000548210 RAPGEF6Q8TEU7 1601 aa11.22□□□□□ -0.61
LINC02400-201ENST00000548210 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
LINC02400-201ENST00000548210 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
LINC02400-201ENST00000548210 ZNF142P52746 1687 aaPredicted RBP11.2□□□□□ -0.62
LINC02400-201ENST00000548210 PLA2R1Q13018 1463 aa11.2□□□□□ -0.62
LINC02400-201ENST00000548210 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
LINC02400-201ENST00000548210 AGLP35573 1532 aa11.19□□□□□ -0.62
LINC02400-201ENST00000548210 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 TOM1O60784 492 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 CPS1P31327 1500 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 NUP153P49790 1475 aaKnown RBP11.17□□□□□ -0.62
LINC02400-201ENST00000548210 NPATQ14207 1427 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 SCAPERQ9BY12 1400 aa11.17□□□□□ -0.62
LINC02400-201ENST00000548210 KDM5CP41229 1560 aa11.16□□□□□ -0.62
LINC02400-201ENST00000548210 DIP2CQ9Y2E4 1556 aa11.16□□□□□ -0.62
LINC02400-201ENST00000548210 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
LINC02400-201ENST00000548210 MROH2AA6NES4 1674 aa11.16□□□□□ -0.62
LINC02400-201ENST00000548210 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
LINC02400-201ENST00000548210 PKD2Q13563 968 aa11.15□□□□□ -0.62
LINC02400-201ENST00000548210 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.63
LINC02400-201ENST00000548210 MYO3AQ8NEV4 1616 aa11.14□□□□□ -0.63
LINC02400-201ENST00000548210 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
LINC02400-201ENST00000548210 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
LINC02400-201ENST00000548210 PTPRKQ15262 1439 aa11.12□□□□□ -0.63
LINC02400-201ENST00000548210 CNTLNQ9NXG0 1405 aa11.12□□□□□ -0.63
LINC02400-201ENST00000548210 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
LINC02400-201ENST00000548210 PLCH2O75038 1416 aa11.11□□□□□ -0.63
LINC02400-201ENST00000548210 ZNF518AQ6AHZ1 1483 aa11.11□□□□□ -0.63
LINC02400-201ENST00000548210 SHANK2Q9UPX8 1470 aa11.1□□□□□ -0.63
LINC02400-201ENST00000548210 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
LINC02400-201ENST00000548210 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
LINC02400-201ENST00000548210 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
LINC02400-201ENST00000548210 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
LINC02400-201ENST00000548210 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
LINC02400-201ENST00000548210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
LINC02400-201ENST00000548210 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
LINC02400-201ENST00000548210 MYO5CQ9NQX4 1742 aa11.07□□□□□ -0.64
LINC02400-201ENST00000548210 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
LINC02400-201ENST00000548210 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
LINC02400-201ENST00000548210 VWDEQ8N2E2 1590 aa11.07□□□□□ -0.64
LINC02400-201ENST00000548210 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
LINC02400-201ENST00000548210 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
LINC02400-201ENST00000548210 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
LINC02400-201ENST00000548210 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
LINC02400-201ENST00000548210 PRXQ9BXM0 1461 aa11.04□□□□□ -0.64
LINC02400-201ENST00000548210 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
LINC02400-201ENST00000548210 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
LINC02400-201ENST00000548210 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
LINC02400-201ENST00000548210 AFAP1Q8N556 730 aa11.01□□□□□ -0.65
LINC02400-201ENST00000548210 UPF1Q92900 1129 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC02400-201ENST00000548210 SYNMO15061 1565 aa11.01□□□□□ -0.65
LINC02400-201ENST00000548210 CLTCQ00610 1675 aaKnown RBP11.01□□□□□ -0.65
LINC02400-201ENST00000548210 KIDINS220Q9ULH0 1771 aa11□□□□□ -0.65
LINC02400-201ENST00000548210 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
LINC02400-201ENST00000548210 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
LINC02400-201ENST00000548210 LRRC7Q96NW7 1537 aa10.98□□□□□ -0.65
LINC02400-201ENST00000548210 ITSN2Q9NZM3 1697 aa10.95□□□□□ -0.66
LINC02400-201ENST00000548210 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
LINC02400-201ENST00000548210 CDK13Q14004 1512 aaKnown RBP10.95□□□□□ -0.66
LINC02400-201ENST00000548210 MED14O60244 1454 aa10.95□□□□□ -0.66
LINC02400-201ENST00000548210 SENP3Q9H4L4 574 aaPredicted RBP10.95□□□□□ -0.66
LINC02400-201ENST00000548210 KIF14Q15058 1648 aa10.95□□□□□ -0.66
LINC02400-201ENST00000548210 ABCC1P33527 1531 aa10.94□□□□□ -0.66
LINC02400-201ENST00000548210 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
LINC02400-201ENST00000548210 CDC42BPBQ9Y5S2 1711 aa10.94□□□□□ -0.66
LINC02400-201ENST00000548210 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
LINC02400-201ENST00000548210 IQGAP1P46940 1657 aa10.92□□□□□ -0.66
LINC02400-201ENST00000548210 PLXNC1O60486 1568 aa10.92□□□□□ -0.66
LINC02400-201ENST00000548210 SRCAPQ6ZRS2 3230 aa10.92□□□□□ -0.66
LINC02400-201ENST00000548210 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
LINC02400-201ENST00000548210 NPHP4O75161 1426 aaPredicted RBP10.9□□□□□ -0.66
LINC02400-201ENST00000548210 FAM135BQ49AJ0 1406 aa10.9□□□□□ -0.66
LINC02400-201ENST00000548210 PREX2Q70Z35 1606 aa10.88□□□□□ -0.67
LINC02400-201ENST00000548210 ZC3H13Q5T200 1668 aaKnown RBP10.88□□□□□ -0.67
LINC02400-201ENST00000548210 SAMD9LQ8IVG5 1584 aa10.87□□□□□ -0.67
LINC02400-201ENST00000548210 ROBO1Q9Y6N7 1651 aa10.86□□□□□ -0.67
LINC02400-201ENST00000548210 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
LINC02400-201ENST00000548210 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
LINC02400-201ENST00000548210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC02400-201ENST00000548210 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
LINC02400-201ENST00000548210 TROQ12816 1431 aaPredicted RBP10.83□□□□□ -0.68
LINC02400-201ENST00000548210 TNRQ92752 1358 aa10.82□□□□□ -0.68
LINC02400-201ENST00000548210 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
LINC02400-201ENST00000548210 ATP7AQ04656 1500 aa10.81□□□□□ -0.68
LINC02400-201ENST00000548210 A2MP01023 1474 aa10.81□□□□□ -0.68
LINC02400-201ENST00000548210 PZPP20742 1482 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms