RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	CCDC18	Q5T9S5	1454 aa		13.95	□□□□□ -0.18
MARF1-205	ENST00000548025	TOM1	O60784	492 aa		13.95	□□□□□ -0.18
MARF1-205	ENST00000548025	OS9	Q13438	667 aa	Predicted RBP	13.94	□□□□□ -0.18
MARF1-205	ENST00000548025	WDHD1	O75717	1129 aa	Predicted RBP	13.93	□□□□□ -0.18
MARF1-205	ENST00000548025	TERF2IP	Q9NYB0	399 aa		13.93	□□□□□ -0.18
MARF1-205	ENST00000548025	VGF	O15240	615 aa	Predicted RBP	13.92	□□□□□ -0.18
MARF1-205	ENST00000548025	TNIK	Q9UKE5	1360 aa		13.92	□□□□□ -0.18
MARF1-205	ENST00000548025	HSP90AA1	P07900	732 aa	Known RBP	13.91	□□□□□ -0.18
MARF1-205	ENST00000548025	AMPH	P49418	695 aa		13.91	□□□□□ -0.18
MARF1-205	ENST00000548025	TMF1	P82094	1093 aa		13.91	□□□□□ -0.18
MARF1-205	ENST00000548025	CALD1	Q05682	793 aa	Known RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	NUTM2E	B1AL46	878 aa	Predicted RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	CARD11	Q9BXL7	1154 aa		13.9	□□□□□ -0.18
MARF1-205	ENST00000548025	TAF7L	Q5H9L4	462 aa		13.89	□□□□□ -0.19
MARF1-205	ENST00000548025	CASC1	Q6TDU7	716 aa		13.89	□□□□□ -0.19
MARF1-205	ENST00000548025	TRIM34	Q9BYJ4	488 aa		13.88	□□□□□ -0.19
MARF1-205	ENST00000548025	GRIN2B	Q13224	1484 aa		13.87	□□□□□ -0.19
MARF1-205	ENST00000548025	CC2D2A	Q9P2K1	1620 aa		13.87	□□□□□ -0.19
MARF1-205	ENST00000548025	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
MARF1-205	ENST00000548025	GAPVD1	Q14C86	1478 aa		13.86	□□□□□ -0.19
MARF1-205	ENST00000548025	C1orf141	Q5JVX7	400 aa		13.86	□□□□□ -0.19
MARF1-205	ENST00000548025	GPRASP1	Q5JY77	1395 aa		13.86	□□□□□ -0.19
MARF1-205	ENST00000548025	MS4A1	P11836	297 aa		13.85	□□□□□ -0.19
MARF1-205	ENST00000548025	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.84	□□□□□ -0.19
MARF1-205	ENST00000548025	NOL10	Q9BSC4	688 aa	Known RBP	13.84	□□□□□ -0.19
MARF1-205	ENST00000548025	PDE3B	Q13370	1112 aa		13.84	□□□□□ -0.19
MARF1-205	ENST00000548025	LAS1L	Q9Y4W2	734 aa	Known RBP	13.84	□□□□□ -0.19
MARF1-205	ENST00000548025	U2SURP	O15042	1029 aa	Known RBP	13.83	□□□□□ -0.2
MARF1-205	ENST00000548025	NCAPD3	P42695	1498 aa		13.83	□□□□□ -0.2
MARF1-205	ENST00000548025	HSP90B1	P14625	803 aa	Known RBP	13.83	□□□□□ -0.2
MARF1-205	ENST00000548025	TULP1	O00294	542 aa	Predicted RBP	13.82	□□□□□ -0.2
MARF1-205	ENST00000548025	RAPGEF2	Q9Y4G8	1499 aa		13.82	□□□□□ -0.2
MARF1-205	ENST00000548025	FRAT2	O75474	233 aa	Predicted RBP	13.82	□□□□□ -0.2
MARF1-205	ENST00000548025	TOP2A	P11388	1531 aa	Known RBP	13.81	□□□□□ -0.2
MARF1-205	ENST00000548025	UBAP1L	F5GYI3	381 aa		13.81	□□□□□ -0.2
MARF1-205	ENST00000548025	SYTL4	Q96C24	671 aa	Predicted RBP	13.81	□□□□□ -0.2
MARF1-205	ENST00000548025	MROH2B	Q7Z745	1585 aa		13.81	□□□□□ -0.2
MARF1-205	ENST00000548025	FKBP8	Q14318	412 aa		13.8	□□□□□ -0.2
MARF1-205	ENST00000548025	CLSTN1	O94985	981 aa		13.8	□□□□□ -0.2
MARF1-205	ENST00000548025	TTC5	Q8N0Z6	440 aa		13.8	□□□□□ -0.2
MARF1-205	ENST00000548025	MORC1	Q86VD1	984 aa		13.79	□□□□□ -0.2
MARF1-205	ENST00000548025	AMOTL1	Q8IY63	956 aa		13.78	□□□□□ -0.2
MARF1-205	ENST00000548025	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
MARF1-205	ENST00000548025	TXNDC2	Q86VQ3	553 aa		13.77	□□□□□ -0.2
MARF1-205	ENST00000548025	SETD5	Q9C0A6	1442 aa		13.77	□□□□□ -0.2
MARF1-205	ENST00000548025	ARHGAP35	Q9NRY4	1499 aa		13.77	□□□□□ -0.21
MARF1-205	ENST00000548025	NBPF8	Q3BBV2	869 aa		13.77	□□□□□ -0.21
MARF1-205	ENST00000548025	NBPF14	Q5TI25	921 aa		13.77	□□□□□ -0.21
MARF1-205	ENST00000548025	CCAR1	Q8IX12	1150 aa	Known RBP	13.77	□□□□□ -0.21
MARF1-205	ENST00000548025	GORAB	Q5T7V8	394 aa		13.76	□□□□□ -0.21
MARF1-205	ENST00000548025	PRG4	Q92954	1404 aa	Predicted RBP	13.76	□□□□□ -0.21
MARF1-205	ENST00000548025	ANP32E	Q9BTT0	268 aa		13.75	□□□□□ -0.21
MARF1-205	ENST00000548025	TEX14	Q8IWB6	1497 aa		13.75	□□□□□ -0.21
MARF1-205	ENST00000548025	CCDC88B	A6NC98	1476 aa		13.75	□□□□□ -0.21
MARF1-205	ENST00000548025	SYNJ2	O15056	1496 aa		13.75	□□□□□ -0.21
MARF1-205	ENST00000548025	DCAF11	Q8TEB1	546 aa		13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	DDRGK1	Q96HY6	314 aa		13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	RTL5	Q5HYW3	569 aa	Predicted RBP	13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	RBM33	Q96EV2	1170 aa	Known RBP	13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	NGLY1	Q96IV0	654 aa		13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	LMOD3	Q0VAK6	560 aa		13.74	□□□□□ -0.21
MARF1-205	ENST00000548025	ZRSR1	Q15695	479 aa	Known RBP	13.73	□□□□□ -0.21
MARF1-205	ENST00000548025	SMARCA4	P51532	1647 aa		13.73	□□□□□ -0.21
MARF1-205	ENST00000548025	RAPGEF4	Q8WZA2	1011 aa		13.73	□□□□□ -0.21
MARF1-205	ENST00000548025	NUP155	O75694	1391 aa		13.72	□□□□□ -0.21
MARF1-205	ENST00000548025	FGD1	P98174	961 aa		13.72	□□□□□ -0.21
MARF1-205	ENST00000548025	FTSJ3	Q8IY81	847 aa	Known RBP	13.72	□□□□□ -0.21
MARF1-205	ENST00000548025	PPP6R1	Q9UPN7	881 aa		13.72	□□□□□ -0.21
MARF1-205	ENST00000548025	ANP32B	Q92688	251 aa	Known RBP	13.71	□□□□□ -0.21
MARF1-205	ENST00000548025	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.71	□□□□□ -0.21
MARF1-205	ENST00000548025	DIEXF	Q68CQ4	756 aa	Known RBP	13.71	□□□□□ -0.22
MARF1-205	ENST00000548025	WWC1	Q8IX03	1113 aa		13.71	□□□□□ -0.22
MARF1-205	ENST00000548025	KCNJ4	P48050	445 aa		13.7	□□□□□ -0.22
MARF1-205	ENST00000548025	STK31	Q9BXU1	1019 aa		13.7	□□□□□ -0.22
MARF1-205	ENST00000548025	COG3	Q96JB2	828 aa		13.7	□□□□□ -0.22
MARF1-205	ENST00000548025	SYNJ1	O43426	1573 aa		13.7	□□□□□ -0.22
MARF1-205	ENST00000548025	LRPPRC	P42704	1394 aa	Known RBP	13.69	□□□□□ -0.22
MARF1-205	ENST00000548025	AKNA	Q7Z591	1439 aa		13.69	□□□□□ -0.22
MARF1-205	ENST00000548025	LTV1	Q96GA3	475 aa	Predicted RBP	13.68	□□□□□ -0.22
MARF1-205	ENST00000548025	SMC4	Q9NTJ3	1288 aa		13.68	□□□□□ -0.22
MARF1-205	ENST00000548025	PLEKHH2	Q8IVE3	1493 aa		13.68	□□□□□ -0.22
MARF1-205	ENST00000548025	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.67	□□□□□ -0.22
MARF1-205	ENST00000548025	CHMP3	Q9Y3E7	222 aa		13.67	□□□□□ -0.22
MARF1-205	ENST00000548025	TNNT2	P45379	298 aa	Predicted RBP	13.66	□□□□□ -0.22
MARF1-205	ENST00000548025	FBXW7	Q969H0	707 aa		13.66	□□□□□ -0.22
MARF1-205	ENST00000548025	AQR	O60306	1485 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	1e-9	■■■■■ 37.7
MARF1-205	ENST00000548025	PKD2	Q13563	968 aa		13.66	□□□□□ -0.22
MARF1-205	ENST00000548025	ESCO1	Q5FWF5	840 aa		13.66	□□□□□ -0.22
MARF1-205	ENST00000548025	NUTM2F	A1L443	756 aa		13.65	□□□□□ -0.22
MARF1-205	ENST00000548025	CNKSR2	Q8WXI2	1034 aa		13.65	□□□□□ -0.22
MARF1-205	ENST00000548025	TCEAL9	Q9UHQ7	104 aa		13.65	□□□□□ -0.22
MARF1-205	ENST00000548025	NCL	P19338	710 aa	Known RBP	13.64	□□□□□ -0.23
MARF1-205	ENST00000548025	EVC2	Q86UK5	1308 aa		13.64	□□□□□ -0.23
MARF1-205	ENST00000548025	POLD1	P28340	1107 aa		13.64	□□□□□ -0.23
MARF1-205	ENST00000548025	CFAP44	Q96MT7	982 aa		13.64	□□□□□ -0.23
MARF1-205	ENST00000548025	LAMC3	Q9Y6N6	1575 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms