RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
TUBA1A-204ENST00000547939 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
TUBA1A-204ENST00000547939 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
TUBA1A-204ENST00000547939 FANCAO15360 1455 aa17.02■□□□□ 0.32
TUBA1A-204ENST00000547939 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
TUBA1A-204ENST00000547939 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
TUBA1A-204ENST00000547939 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
TUBA1A-204ENST00000547939 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
TUBA1A-204ENST00000547939 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
TUBA1A-204ENST00000547939 HECW1Q76N89 1606 aa16.96■□□□□ 0.3
TUBA1A-204ENST00000547939 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.3
TUBA1A-204ENST00000547939 AKNAQ7Z591 1439 aa16.96■□□□□ 0.3
TUBA1A-204ENST00000547939 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
TUBA1A-204ENST00000547939 PTPRTO14522 1441 aa16.93■□□□□ 0.3
TUBA1A-204ENST00000547939 CFAP74Q9C0B2 1584 aa16.93■□□□□ 0.3
TUBA1A-204ENST00000547939 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
TUBA1A-204ENST00000547939 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
TUBA1A-204ENST00000547939 MLECQ14165 292 aa16.9■□□□□ 0.3
TUBA1A-204ENST00000547939 C3P01024 1663 aa16.89■□□□□ 0.29
TUBA1A-204ENST00000547939 CLIP1P30622 1438 aa16.88■□□□□ 0.29
TUBA1A-204ENST00000547939 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
TUBA1A-204ENST00000547939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
TUBA1A-204ENST00000547939 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
TUBA1A-204ENST00000547939 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
TUBA1A-204ENST00000547939 EFCAB2Q5VUJ9 269 aa16.86■□□□□ 0.29
TUBA1A-204ENST00000547939 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
TUBA1A-204ENST00000547939 PLCH2O75038 1416 aa16.85■□□□□ 0.29
TUBA1A-204ENST00000547939 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
TUBA1A-204ENST00000547939 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
TUBA1A-204ENST00000547939 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
TUBA1A-204ENST00000547939 ATP10AO60312 1499 aa16.8■□□□□ 0.28
TUBA1A-204ENST00000547939 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
TUBA1A-204ENST00000547939 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
TUBA1A-204ENST00000547939 SCAPERQ9BY12 1400 aa16.79■□□□□ 0.28
TUBA1A-204ENST00000547939 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
TUBA1A-204ENST00000547939 KIF14Q15058 1648 aa16.76■□□□□ 0.27
TUBA1A-204ENST00000547939 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
TUBA1A-204ENST00000547939 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
TUBA1A-204ENST00000547939 CAMSAP1Q5T5Y3 1602 aa16.73■□□□□ 0.27
TUBA1A-204ENST00000547939 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
TUBA1A-204ENST00000547939 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
TUBA1A-204ENST00000547939 KDM5CP41229 1560 aa16.71■□□□□ 0.27
TUBA1A-204ENST00000547939 REREQ9P2R6 1566 aa16.71■□□□□ 0.27
TUBA1A-204ENST00000547939 ZNF335Q9H4Z2 1342 aaPredicted RBP16.7■□□□□ 0.26
TUBA1A-204ENST00000547939 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
TUBA1A-204ENST00000547939 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
TUBA1A-204ENST00000547939 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
TUBA1A-204ENST00000547939 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
TUBA1A-204ENST00000547939 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
TUBA1A-204ENST00000547939 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
TUBA1A-204ENST00000547939 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
TUBA1A-204ENST00000547939 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
TUBA1A-204ENST00000547939 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
TUBA1A-204ENST00000547939 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
TUBA1A-204ENST00000547939 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
TUBA1A-204ENST00000547939 HSPA1LP34931 641 aa16.65■□□□□ 0.26
TUBA1A-204ENST00000547939 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
TUBA1A-204ENST00000547939 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
TUBA1A-204ENST00000547939 LRRIQ1Q96JM4 1722 aa16.65■□□□□ 0.26
TUBA1A-204ENST00000547939 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
TUBA1A-204ENST00000547939 MROH2AA6NES4 1674 aa16.63■□□□□ 0.25
TUBA1A-204ENST00000547939 AGLP35573 1532 aa16.63■□□□□ 0.25
TUBA1A-204ENST00000547939 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
TUBA1A-204ENST00000547939 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
TUBA1A-204ENST00000547939 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
TUBA1A-204ENST00000547939 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
TUBA1A-204ENST00000547939 PREX2Q70Z35 1606 aa16.58■□□□□ 0.24
TUBA1A-204ENST00000547939 CDC42BPBQ9Y5S2 1711 aa16.58■□□□□ 0.24
TUBA1A-204ENST00000547939 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
TUBA1A-204ENST00000547939 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
TUBA1A-204ENST00000547939 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
TUBA1A-204ENST00000547939 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
TUBA1A-204ENST00000547939 ABCC1P33527 1531 aa16.55■□□□□ 0.24
TUBA1A-204ENST00000547939 PLEKHH2Q8IVE3 1493 aa16.55■□□□□ 0.24
TUBA1A-204ENST00000547939 NPATQ14207 1427 aa16.55■□□□□ 0.24
TUBA1A-204ENST00000547939 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
TUBA1A-204ENST00000547939 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
TUBA1A-204ENST00000547939 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
TUBA1A-204ENST00000547939 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
TUBA1A-204ENST00000547939 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
TUBA1A-204ENST00000547939 EHBP1L1Q8N3D4 1523 aa16.54■□□□□ 0.24
TUBA1A-204ENST00000547939 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
TUBA1A-204ENST00000547939 ITSN2Q9NZM3 1697 aa16.53■□□□□ 0.24
TUBA1A-204ENST00000547939 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
TUBA1A-204ENST00000547939 APLP2Q06481 763 aa16.51■□□□□ 0.23
TUBA1A-204ENST00000547939 CNTLNQ9NXG0 1405 aa16.51■□□□□ 0.23
TUBA1A-204ENST00000547939 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
TUBA1A-204ENST00000547939 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
TUBA1A-204ENST00000547939 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
TUBA1A-204ENST00000547939 RGS17Q9UGC6 210 aaPredicted RBP16.49■□□□□ 0.23
TUBA1A-204ENST00000547939 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
TUBA1A-204ENST00000547939 SAMD9LQ8IVG5 1584 aa16.48■□□□□ 0.23
TUBA1A-204ENST00000547939 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
TUBA1A-204ENST00000547939 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
TUBA1A-204ENST00000547939 STRCP1A6NGW2 1772 aa16.47■□□□□ 0.23
TUBA1A-204ENST00000547939 CPS1P31327 1500 aa16.46■□□□□ 0.23
TUBA1A-204ENST00000547939 PKD2Q13563 968 aa16.46■□□□□ 0.23
TUBA1A-204ENST00000547939 NCOA2Q15596 1464 aa16.46■□□□□ 0.23
TUBA1A-204ENST00000547939 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
TUBA1A-204ENST00000547939 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms