RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
CACNB3-205ENST00000547392 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
CACNB3-205ENST00000547392 TROQ12816 1431 aaPredicted RBP30.35■■■□□ 2.45
CACNB3-205ENST00000547392 CEP170Q5SW79 1584 aa30.35■■■□□ 2.45
CACNB3-205ENST00000547392 ADCY10Q96PN6 1610 aa30.33■■■□□ 2.45
CACNB3-205ENST00000547392 ANKRD30BQ9BXX2 1392 aa30.32■■■□□ 2.45
CACNB3-205ENST00000547392 ITSN2Q9NZM3 1697 aa30.32■■■□□ 2.44
CACNB3-205ENST00000547392 RPRD2Q5VT52 1461 aaKnown RBP30.3■■■□□ 2.44
CACNB3-205ENST00000547392 HSPA5P11021 654 aaKnown RBP30.3■■■□□ 2.44
CACNB3-205ENST00000547392 L3MBTL2Q969R5 705 aa30.26■■■□□ 2.43
CACNB3-205ENST00000547392 ZNF644Q9H582 1327 aaPredicted RBP30.26■■■□□ 2.43
CACNB3-205ENST00000547392 NUP160Q12769 1436 aa30.26■■■□□ 2.43
CACNB3-205ENST00000547392 EIF4G2P78344 907 aaKnown RBP eCLIP30.26■■■□□ 2.43
CACNB3-205ENST00000547392 PRG4Q92954 1404 aaPredicted RBP30.26■■■□□ 2.43
CACNB3-205ENST00000547392 ADGBQ8N7X0 1667 aa30.25■■■□□ 2.43
CACNB3-205ENST00000547392 CAMSAP2Q08AD1 1489 aa30.25■■■□□ 2.43
CACNB3-205ENST00000547392 WASHC2AQ641Q2 1341 aa30.24■■■□□ 2.43
CACNB3-205ENST00000547392 TEX14Q8IWB6 1497 aa30.23■■■□□ 2.43
CACNB3-205ENST00000547392 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
CACNB3-205ENST00000547392 CARMIL2Q6F5E8 1435 aa30.22■■■□□ 2.43
CACNB3-205ENST00000547392 PLB1Q6P1J6 1458 aa30.22■■■□□ 2.43
CACNB3-205ENST00000547392 ADGRL2O95490 1459 aa30.21■■■□□ 2.43
CACNB3-205ENST00000547392 CROCC2H7BZ55 1655 aa30.19■■■□□ 2.42
CACNB3-205ENST00000547392 NCOA1Q15788 1441 aa30.17■■■□□ 2.42
CACNB3-205ENST00000547392 FOXD1Q16676 465 aa30.17■■■□□ 2.42
CACNB3-205ENST00000547392 KIF14Q15058 1648 aa30.17■■■□□ 2.42
CACNB3-205ENST00000547392 PZPP20742 1482 aa30.16■■■□□ 2.42
CACNB3-205ENST00000547392 CFDP1Q9UEE9 299 aaPredicted RBP30.16■■■□□ 2.42
CACNB3-205ENST00000547392 CNTLNQ9NXG0 1405 aa30.15■■■□□ 2.42
CACNB3-205ENST00000547392 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
CACNB3-205ENST00000547392 JPH4Q96JJ6 628 aa30.12■■■□□ 2.41
CACNB3-205ENST00000547392 ABCA8O94911 1581 aa30.12■■■□□ 2.41
CACNB3-205ENST00000547392 MYT1Q01538 1121 aa30.11■■■□□ 2.41
CACNB3-205ENST00000547392 FKBP8Q14318 412 aa30.11■■■□□ 2.41
CACNB3-205ENST00000547392 POLR1AO95602 1720 aaPredicted RBP30.09■■■□□ 2.41
CACNB3-205ENST00000547392 CCDC7Q96M83 1385 aa30.09■■■□□ 2.41
CACNB3-205ENST00000547392 NBPF8Q3BBV2 869 aa30.08■■■□□ 2.41
CACNB3-205ENST00000547392 SPATA31E1Q6ZUB1 1445 aa30.07■■■□□ 2.4
CACNB3-205ENST00000547392 TSHZ2Q9NRE2 1034 aa30.06■■■□□ 2.4
CACNB3-205ENST00000547392 NEFLP07196 543 aa30.05■■■□□ 2.4
CACNB3-205ENST00000547392 ANKRD30AQ9BXX3 1397 aa30.04■■■□□ 2.4
CACNB3-205ENST00000547392 KIAA1107Q9UPP5 1409 aa30.04■■■□□ 2.4
CACNB3-205ENST00000547392 CDC42BPAQ5VT25 1732 aa30.04■■■□□ 2.4
CACNB3-205ENST00000547392 ABCC10Q5T3U5 1492 aa30.04■■■□□ 2.4
CACNB3-205ENST00000547392 SHANK2Q9UPX8 1470 aa30.03■■■□□ 2.4
CACNB3-205ENST00000547392 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
CACNB3-205ENST00000547392 C11orf95C9JLR9 678 aaPredicted RBP30■■■□□ 2.39
CACNB3-205ENST00000547392 ATP10BO94823 1461 aa29.99■■■□□ 2.39
CACNB3-205ENST00000547392 PLEKHD1A6NEE1 506 aa29.97■■■□□ 2.39
CACNB3-205ENST00000547392 ANKRD50Q9ULJ7 1429 aa29.95■■■□□ 2.38
CACNB3-205ENST00000547392 CHD1O14646 1710 aa29.94■■■□□ 2.38
CACNB3-205ENST00000547392 ZNF777Q9ULD5 760 aaPredicted RBP29.94■■■□□ 2.38
CACNB3-205ENST00000547392 BCANQ96GW7 911 aa29.93■■■□□ 2.38
CACNB3-205ENST00000547392 KDM5DQ9BY66 1539 aa29.91■■■□□ 2.38
CACNB3-205ENST00000547392 HNRNPUQ00839 825 aaKnown RBP eCLIP29.91■■■□□ 2.38
CACNB3-205ENST00000547392 PRKRIP1Q9H875 184 aaPredicted RBP29.91■■■□□ 2.38
CACNB3-205ENST00000547392 KIF7Q2M1P5 1343 aa29.89■■■□□ 2.38
CACNB3-205ENST00000547392 C9orf84Q5VXU9 1444 aa29.89■■■□□ 2.38
CACNB3-205ENST00000547392 ARHGEF5Q12774 1597 aa29.88■■■□□ 2.37
CACNB3-205ENST00000547392 PKD2Q13563 968 aa29.87■■■□□ 2.37
CACNB3-205ENST00000547392 UHRF1BP1Q6BDS2 1440 aa29.84■■■□□ 2.37
CACNB3-205ENST00000547392 ARHGEF12Q9NZN5 1544 aa29.8■■■□□ 2.36
CACNB3-205ENST00000547392 PTPRGP23470 1445 aa29.8■■■□□ 2.36
CACNB3-205ENST00000547392 CCDC184Q52MB2 194 aa29.8■■■□□ 2.36
CACNB3-205ENST00000547392 KDM5CP41229 1560 aa29.79■■■□□ 2.36
CACNB3-205ENST00000547392 ARID4BQ4LE39 1312 aaPredicted RBP29.78■■■□□ 2.36
CACNB3-205ENST00000547392 NUP155O75694 1391 aa29.77■■■□□ 2.36
CACNB3-205ENST00000547392 TSPY4P0CV99 314 aa29.76■■■□□ 2.36
CACNB3-205ENST00000547392 TSPY10P0CW01 314 aa29.76■■■□□ 2.36
CACNB3-205ENST00000547392 BCORL1Q5H9F3 1711 aa29.76■■■□□ 2.35
CACNB3-205ENST00000547392 USP47Q96K76 1375 aa29.76■■■□□ 2.35
CACNB3-205ENST00000547392 RALGAPBQ86X10 1494 aa29.75■■■□□ 2.35
CACNB3-205ENST00000547392 PREX2Q70Z35 1606 aa29.75■■■□□ 2.35
CACNB3-205ENST00000547392 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
CACNB3-205ENST00000547392 MRS2Q9HD23 443 aa29.72■■■□□ 2.35
CACNB3-205ENST00000547392 KIF15Q9NS87 1388 aa29.71■■■□□ 2.35
CACNB3-205ENST00000547392 SAMD9LQ8IVG5 1584 aa29.71■■■□□ 2.35
CACNB3-205ENST00000547392 ERICH6BQ5W0A0 696 aa29.71■■■□□ 2.35
CACNB3-205ENST00000547392 DHX29Q7Z478 1369 aaKnown RBP29.7■■■□□ 2.35
CACNB3-205ENST00000547392 CCDC141Q6ZP82 1450 aa29.7■■■□□ 2.35
CACNB3-205ENST00000547392 RSPH4AQ5TD94 716 aa29.69■■■□□ 2.34
CACNB3-205ENST00000547392 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
CACNB3-205ENST00000547392 ZBED9Q6R2W3 1325 aa29.68■■■□□ 2.34
CACNB3-205ENST00000547392 SHROOM2Q13796 1616 aa29.66■■■□□ 2.34
CACNB3-205ENST00000547392 HNRNPMP52272 730 aaKnown RBP eCLIP29.65■■■□□ 2.34
CACNB3-205ENST00000547392 MAST1Q9Y2H9 1570 aa29.64■■■□□ 2.34
CACNB3-205ENST00000547392 ROCK2O75116 1388 aaKnown RBP29.63■■■□□ 2.33
CACNB3-205ENST00000547392 FAM9BQ8IZU0 186 aa29.62■■■□□ 2.33
CACNB3-205ENST00000547392 FAM135AQ9P2D6 1515 aa29.59■■■□□ 2.33
CACNB3-205ENST00000547392 ZNF326Q5BKZ1 582 aaKnown RBP29.59■■■□□ 2.33
CACNB3-205ENST00000547392 UNC13BO14795 1591 aa29.55■■■□□ 2.32
CACNB3-205ENST00000547392 CARD11Q9BXL7 1154 aa29.53■■■□□ 2.32
CACNB3-205ENST00000547392 TTC37Q6PGP7 1564 aa29.53■■■□□ 2.32
CACNB3-205ENST00000547392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.52■■■□□ 2.32
CACNB3-205ENST00000547392 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.31
CACNB3-205ENST00000547392 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.31
CACNB3-205ENST00000547392 PLXNC1O60486 1568 aa29.5■■■□□ 2.31
CACNB3-205ENST00000547392 PLEKHH2Q8IVE3 1493 aa29.5■■■□□ 2.31
CACNB3-205ENST00000547392 RBM19Q9Y4C8 960 aaKnown RBP29.5■■■□□ 2.31
CACNB3-205ENST00000547392 ABCC2Q92887 1545 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms