RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
SCAF11-209ENST00000547018 PTPRGP23470 1445 aa17.96■□□□□ 0.47
SCAF11-209ENST00000547018 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
SCAF11-209ENST00000547018 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
SCAF11-209ENST00000547018 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-209ENST00000547018 KIAA0556O60303 1618 aa17.96■□□□□ 0.46
SCAF11-209ENST00000547018 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
SCAF11-209ENST00000547018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCAF11-209ENST00000547018 ANP32CO43423 234 aa17.92■□□□□ 0.46
SCAF11-209ENST00000547018 PKD2Q13563 968 aa17.92■□□□□ 0.46
SCAF11-209ENST00000547018 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
SCAF11-209ENST00000547018 KDM6BO15054 1643 aa17.9■□□□□ 0.46
SCAF11-209ENST00000547018 BCANQ96GW7 911 aa17.9■□□□□ 0.46
SCAF11-209ENST00000547018 ABCC5O15440 1437 aa17.89■□□□□ 0.45
SCAF11-209ENST00000547018 TROQ12816 1431 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-209ENST00000547018 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
SCAF11-209ENST00000547018 DAPK1P53355 1430 aa17.88■□□□□ 0.45
SCAF11-209ENST00000547018 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
SCAF11-209ENST00000547018 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
SCAF11-209ENST00000547018 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.451e-13■■■■■ 57.3
SCAF11-209ENST00000547018 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
SCAF11-209ENST00000547018 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
SCAF11-209ENST00000547018 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
SCAF11-209ENST00000547018 NUP155O75694 1391 aa17.83■□□□□ 0.44
SCAF11-209ENST00000547018 ATP10BO94823 1461 aa17.82■□□□□ 0.44
SCAF11-209ENST00000547018 KIF14Q15058 1648 aa17.82■□□□□ 0.44
SCAF11-209ENST00000547018 NUP160Q12769 1436 aa17.82■□□□□ 0.44
SCAF11-209ENST00000547018 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
SCAF11-209ENST00000547018 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
SCAF11-209ENST00000547018 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-209ENST00000547018 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
SCAF11-209ENST00000547018 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
SCAF11-209ENST00000547018 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
SCAF11-209ENST00000547018 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
SCAF11-209ENST00000547018 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
SCAF11-209ENST00000547018 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
SCAF11-209ENST00000547018 NCOA1Q15788 1441 aa17.73■□□□□ 0.43
SCAF11-209ENST00000547018 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
SCAF11-209ENST00000547018 ANKRD50Q9ULJ7 1429 aa17.72■□□□□ 0.43
SCAF11-209ENST00000547018 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
SCAF11-209ENST00000547018 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCAF11-209ENST00000547018 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
SCAF11-209ENST00000547018 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
SCAF11-209ENST00000547018 AFAP1Q8N556 730 aa17.69■□□□□ 0.42
SCAF11-209ENST00000547018 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
SCAF11-209ENST00000547018 C9orf84Q5VXU9 1444 aa17.68■□□□□ 0.42
SCAF11-209ENST00000547018 CCDC184Q52MB2 194 aa17.67■□□□□ 0.42
SCAF11-209ENST00000547018 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
SCAF11-209ENST00000547018 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
SCAF11-209ENST00000547018 FKBP8Q14318 412 aa17.66■□□□□ 0.42
SCAF11-209ENST00000547018 MYT1Q01538 1121 aa17.65■□□□□ 0.42
SCAF11-209ENST00000547018 CHD1O14646 1710 aa17.65■□□□□ 0.42
SCAF11-209ENST00000547018 ROCK1Q13464 1354 aa17.65■□□□□ 0.42
SCAF11-209ENST00000547018 ARHGAP5Q13017 1502 aa17.62■□□□□ 0.41
SCAF11-209ENST00000547018 MRS2Q9HD23 443 aa17.62■□□□□ 0.41
SCAF11-209ENST00000547018 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
SCAF11-209ENST00000547018 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
SCAF11-209ENST00000547018 SUPT16HQ9Y5B9 1047 aaKnown RBP17.61■□□□□ 0.41
SCAF11-209ENST00000547018 ABCA8O94911 1581 aa17.59■□□□□ 0.41
SCAF11-209ENST00000547018 PZPP20742 1482 aa17.57■□□□□ 0.4
SCAF11-209ENST00000547018 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
SCAF11-209ENST00000547018 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
SCAF11-209ENST00000547018 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCAF11-209ENST00000547018 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SCAF11-209ENST00000547018 GCC2Q8IWJ2 1684 aa17.56■□□□□ 0.4
SCAF11-209ENST00000547018 NEFLP07196 543 aa17.56■□□□□ 0.4
SCAF11-209ENST00000547018 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
SCAF11-209ENST00000547018 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
SCAF11-209ENST00000547018 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
SCAF11-209ENST00000547018 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
SCAF11-209ENST00000547018 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
SCAF11-209ENST00000547018 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
SCAF11-209ENST00000547018 KIF3BO15066 747 aa17.52■□□□□ 0.4
SCAF11-209ENST00000547018 USP47Q96K76 1375 aa17.52■□□□□ 0.4
SCAF11-209ENST00000547018 CCDC7Q96M83 1385 aa17.52■□□□□ 0.4
SCAF11-209ENST00000547018 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.39
SCAF11-209ENST00000547018 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
SCAF11-209ENST00000547018 CDC42BPAQ5VT25 1732 aa17.51■□□□□ 0.39
SCAF11-209ENST00000547018 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
SCAF11-209ENST00000547018 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
SCAF11-209ENST00000547018 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
SCAF11-209ENST00000547018 PLEKHH2Q8IVE3 1493 aa17.49■□□□□ 0.39
SCAF11-209ENST00000547018 PRKRIP1Q9H875 184 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-209ENST00000547018 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
SCAF11-209ENST00000547018 CYB5RLQ6IPT4 315 aa17.46■□□□□ 0.39
SCAF11-209ENST00000547018 GGT6Q6P531 493 aa17.46■□□□□ 0.39
SCAF11-209ENST00000547018 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
SCAF11-209ENST00000547018 MBD5Q9P267 1494 aa17.46■□□□□ 0.39
SCAF11-209ENST00000547018 RSPH4AQ5TD94 716 aa17.46■□□□□ 0.39
SCAF11-209ENST00000547018 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
SCAF11-209ENST00000547018 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
SCAF11-209ENST00000547018 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
SCAF11-209ENST00000547018 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
SCAF11-209ENST00000547018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■■□ 23.9
SCAF11-209ENST00000547018 SAMD9LQ8IVG5 1584 aa17.43■□□□□ 0.38
SCAF11-209ENST00000547018 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-209ENST00000547018 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
SCAF11-209ENST00000547018 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
SCAF11-209ENST00000547018 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
SCAF11-209ENST00000547018 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms