RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
UBR1-202ENST00000546274 IRX6P78412 446 aaPredicted RBP10.9□□□□□ -0.66
UBR1-202ENST00000546274 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
UBR1-202ENST00000546274 NOP58Q9Y2X3 529 aaKnown RBP10.9□□□□□ -0.66
UBR1-202ENST00000546274 EHBP1L1Q8N3D4 1523 aa10.9□□□□□ -0.66
UBR1-202ENST00000546274 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.66
UBR1-202ENST00000546274 NAIPQ13075 1403 aa10.9□□□□□ -0.67
UBR1-202ENST00000546274 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
UBR1-202ENST00000546274 GCC2Q8IWJ2 1684 aa10.89□□□□□ -0.67
UBR1-202ENST00000546274 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
UBR1-202ENST00000546274 MTUS2Q5JR59 1369 aa10.88□□□□□ -0.67
UBR1-202ENST00000546274 HIRIP3Q9BW71 556 aaPredicted RBP10.88□□□□□ -0.67
UBR1-202ENST00000546274 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
UBR1-202ENST00000546274 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
UBR1-202ENST00000546274 CLASP1Q7Z460 1538 aa10.87□□□□□ -0.67
UBR1-202ENST00000546274 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
UBR1-202ENST00000546274 GRIN2AQ12879 1464 aa10.86□□□□□ -0.67
UBR1-202ENST00000546274 KDM6BO15054 1643 aa10.85□□□□□ -0.67
UBR1-202ENST00000546274 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
UBR1-202ENST00000546274 TONSLQ96HA7 1378 aa10.84□□□□□ -0.67
UBR1-202ENST00000546274 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
UBR1-202ENST00000546274 FBLN2P98095 1184 aa10.83□□□□□ -0.68
UBR1-202ENST00000546274 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
UBR1-202ENST00000546274 NUP160Q12769 1436 aa10.82□□□□□ -0.68
UBR1-202ENST00000546274 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
UBR1-202ENST00000546274 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
UBR1-202ENST00000546274 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
UBR1-202ENST00000546274 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
UBR1-202ENST00000546274 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
UBR1-202ENST00000546274 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
UBR1-202ENST00000546274 AKNAQ7Z591 1439 aa10.79□□□□□ -0.68
UBR1-202ENST00000546274 CEP170Q5SW79 1584 aa10.79□□□□□ -0.68
UBR1-202ENST00000546274 ANP32CO43423 234 aa10.78□□□□□ -0.68
UBR1-202ENST00000546274 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
UBR1-202ENST00000546274 CDK13Q14004 1512 aaKnown RBP10.78□□□□□ -0.68
UBR1-202ENST00000546274 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
UBR1-202ENST00000546274 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
UBR1-202ENST00000546274 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
UBR1-202ENST00000546274 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
UBR1-202ENST00000546274 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
UBR1-202ENST00000546274 POLR1AO95602 1720 aaPredicted RBP10.74□□□□□ -0.69
UBR1-202ENST00000546274 WASHC2AQ641Q2 1341 aa10.73□□□□□ -0.69
UBR1-202ENST00000546274 ZBTB47Q9UFB7 747 aaPredicted RBP10.73□□□□□ -0.69
UBR1-202ENST00000546274 DNMT1P26358 1616 aaKnown RBP10.73□□□□□ -0.69
UBR1-202ENST00000546274 KIAA0586Q9BVV6 1533 aa10.73□□□□□ -0.69
UBR1-202ENST00000546274 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
UBR1-202ENST00000546274 KIAA0556O60303 1618 aa10.71□□□□□ -0.69
UBR1-202ENST00000546274 HSPA5P11021 654 aaKnown RBP10.7□□□□□ -0.7
UBR1-202ENST00000546274 ANP32AP39687 249 aaKnown RBP10.7□□□□□ -0.7
UBR1-202ENST00000546274 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
UBR1-202ENST00000546274 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
UBR1-202ENST00000546274 DISP1Q96F81 1524 aa10.7□□□□□ -0.7
UBR1-202ENST00000546274 NEFMP07197 916 aa10.69□□□□□ -0.7
UBR1-202ENST00000546274 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
UBR1-202ENST00000546274 DAPK1P53355 1430 aa10.69□□□□□ -0.7
UBR1-202ENST00000546274 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
UBR1-202ENST00000546274 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
UBR1-202ENST00000546274 RAPGEF6Q8TEU7 1601 aa10.68□□□□□ -0.7
UBR1-202ENST00000546274 CNTLNQ9NXG0 1405 aa10.68□□□□□ -0.7
UBR1-202ENST00000546274 NUP153P49790 1475 aaKnown RBP10.68□□□□□ -0.7
UBR1-202ENST00000546274 ROCK1Q13464 1354 aa10.67□□□□□ -0.7
UBR1-202ENST00000546274 NCOA1Q15788 1441 aa10.67□□□□□ -0.7
UBR1-202ENST00000546274 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
UBR1-202ENST00000546274 RSPH6AQ9H0K4 717 aa10.67□□□□□ -0.7
UBR1-202ENST00000546274 ABCC5O15440 1437 aa10.67□□□□□ -0.7
UBR1-202ENST00000546274 ANKRD30BQ9BXX2 1392 aa10.66□□□□□ -0.7
UBR1-202ENST00000546274 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
UBR1-202ENST00000546274 FOXD1Q16676 465 aa10.66□□□□□ -0.7
UBR1-202ENST00000546274 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
UBR1-202ENST00000546274 CROCC2H7BZ55 1655 aa10.66□□□□□ -0.7
UBR1-202ENST00000546274 ADGBQ8N7X0 1667 aa10.66□□□□□ -0.7
UBR1-202ENST00000546274 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.71
UBR1-202ENST00000546274 PRG4Q92954 1404 aaPredicted RBP10.65□□□□□ -0.71
UBR1-202ENST00000546274 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR1-202ENST00000546274 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
UBR1-202ENST00000546274 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
UBR1-202ENST00000546274 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
UBR1-202ENST00000546274 CCDC7Q96M83 1385 aa10.64□□□□□ -0.71
UBR1-202ENST00000546274 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBR1-202ENST00000546274 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
UBR1-202ENST00000546274 ADCY10Q96PN6 1610 aa10.63□□□□□ -0.71
UBR1-202ENST00000546274 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
UBR1-202ENST00000546274 NBPF8Q3BBV2 869 aa10.63□□□□□ -0.71
UBR1-202ENST00000546274 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
UBR1-202ENST00000546274 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
UBR1-202ENST00000546274 PZPP20742 1482 aa10.62□□□□□ -0.71
UBR1-202ENST00000546274 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
UBR1-202ENST00000546274 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
UBR1-202ENST00000546274 KIF14Q15058 1648 aa10.61□□□□□ -0.71
UBR1-202ENST00000546274 ERCC6L2Q5T890 1561 aa10.61□□□□□ -0.71
UBR1-202ENST00000546274 BCORL1Q5H9F3 1711 aa10.61□□□□□ -0.71
UBR1-202ENST00000546274 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
UBR1-202ENST00000546274 CYB5RLQ6IPT4 315 aa10.6□□□□□ -0.71
UBR1-202ENST00000546274 PRKRIP1Q9H875 184 aaPredicted RBP10.6□□□□□ -0.71
UBR1-202ENST00000546274 WASHC2CQ9Y4E1 1318 aa10.59□□□□□ -0.71
UBR1-202ENST00000546274 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
UBR1-202ENST00000546274 ADGRL2O95490 1459 aa10.57□□□□□ -0.72
UBR1-202ENST00000546274 RBM10P98175 930 aaKnown RBP10.57□□□□□ -0.72
UBR1-202ENST00000546274 CDC42BPAQ5VT25 1732 aa10.57□□□□□ -0.72
UBR1-202ENST00000546274 TROQ12816 1431 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms