RNA–Protein interactions for RNA: ENST00000544916.5

PHC1-214, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 3,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-214ENST00000544916 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
PHC1-214ENST00000544916 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
PHC1-214ENST00000544916 CFDP1Q9UEE9 299 aaPredicted RBP13.77□□□□□ -0.21
PHC1-214ENST00000544916 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
PHC1-214ENST00000544916 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
PHC1-214ENST00000544916 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
PHC1-214ENST00000544916 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
PHC1-214ENST00000544916 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
PHC1-214ENST00000544916 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
PHC1-214ENST00000544916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHC1-214ENST00000544916 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
PHC1-214ENST00000544916 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
PHC1-214ENST00000544916 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
PHC1-214ENST00000544916 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
PHC1-214ENST00000544916 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
PHC1-214ENST00000544916 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
PHC1-214ENST00000544916 PLIN1O60240 522 aa13.7□□□□□ -0.22
PHC1-214ENST00000544916 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
PHC1-214ENST00000544916 CUL7Q14999 1698 aa13.7□□□□□ -0.22
PHC1-214ENST00000544916 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHC1-214ENST00000544916 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
PHC1-214ENST00000544916 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
PHC1-214ENST00000544916 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
PHC1-214ENST00000544916 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
PHC1-214ENST00000544916 RGS3P49796 1198 aa13.67□□□□□ -0.22
PHC1-214ENST00000544916 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
PHC1-214ENST00000544916 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
PHC1-214ENST00000544916 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
PHC1-214ENST00000544916 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
PHC1-214ENST00000544916 CTTNBP2Q8WZ74 1663 aa13.65□□□□□ -0.22
PHC1-214ENST00000544916 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
PHC1-214ENST00000544916 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
PHC1-214ENST00000544916 CCDC18Q5T9S5 1454 aa13.65□□□□□ -0.22
PHC1-214ENST00000544916 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
PHC1-214ENST00000544916 BRPF3Q9ULD4 1205 aa13.64□□□□□ -0.23
PHC1-214ENST00000544916 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
PHC1-214ENST00000544916 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
PHC1-214ENST00000544916 RGL3Q3MIN7 710 aa13.63□□□□□ -0.23
PHC1-214ENST00000544916 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
PHC1-214ENST00000544916 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
PHC1-214ENST00000544916 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
PHC1-214ENST00000544916 NBPF8Q3BBV2 869 aa13.6□□□□□ -0.23
PHC1-214ENST00000544916 PDE4AP27815 886 aa13.6□□□□□ -0.23
PHC1-214ENST00000544916 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
PHC1-214ENST00000544916 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
PHC1-214ENST00000544916 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
PHC1-214ENST00000544916 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
PHC1-214ENST00000544916 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
PHC1-214ENST00000544916 NAIPQ13075 1403 aa13.59□□□□□ -0.23
PHC1-214ENST00000544916 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
PHC1-214ENST00000544916 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
PHC1-214ENST00000544916 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
PHC1-214ENST00000544916 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
PHC1-214ENST00000544916 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
PHC1-214ENST00000544916 PKD2Q13563 968 aa13.57□□□□□ -0.24
PHC1-214ENST00000544916 DISP1Q96F81 1524 aa13.56□□□□□ -0.24
PHC1-214ENST00000544916 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
PHC1-214ENST00000544916 CCDC7Q96M83 1385 aa13.55□□□□□ -0.24
PHC1-214ENST00000544916 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
PHC1-214ENST00000544916 PTPRGP23470 1445 aa13.54□□□□□ -0.24
PHC1-214ENST00000544916 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
PHC1-214ENST00000544916 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
PHC1-214ENST00000544916 CFAP43Q8NDM7 1665 aa13.54□□□□□ -0.24
PHC1-214ENST00000544916 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
PHC1-214ENST00000544916 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
PHC1-214ENST00000544916 WDR62O43379 1518 aa13.53□□□□□ -0.24
PHC1-214ENST00000544916 ARID4BQ4LE39 1312 aaPredicted RBP13.53□□□□□ -0.24
PHC1-214ENST00000544916 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
PHC1-214ENST00000544916 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.24
PHC1-214ENST00000544916 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
PHC1-214ENST00000544916 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
PHC1-214ENST00000544916 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
PHC1-214ENST00000544916 HFM1A2PYH4 1435 aa13.51□□□□□ -0.25
PHC1-214ENST00000544916 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
PHC1-214ENST00000544916 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
PHC1-214ENST00000544916 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
PHC1-214ENST00000544916 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
PHC1-214ENST00000544916 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
PHC1-214ENST00000544916 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
PHC1-214ENST00000544916 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
PHC1-214ENST00000544916 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
PHC1-214ENST00000544916 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
PHC1-214ENST00000544916 CRBNQ96SW2 442 aa13.48□□□□□ -0.25
PHC1-214ENST00000544916 KDM6BO15054 1643 aa13.48□□□□□ -0.25
PHC1-214ENST00000544916 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
PHC1-214ENST00000544916 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
PHC1-214ENST00000544916 NUP155O75694 1391 aa13.48□□□□□ -0.25
PHC1-214ENST00000544916 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
PHC1-214ENST00000544916 ABCC5O15440 1437 aa13.47□□□□□ -0.25
PHC1-214ENST00000544916 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
PHC1-214ENST00000544916 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
PHC1-214ENST00000544916 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.26
PHC1-214ENST00000544916 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
PHC1-214ENST00000544916 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
PHC1-214ENST00000544916 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
PHC1-214ENST00000544916 DAPK1P53355 1430 aa13.45□□□□□ -0.26
PHC1-214ENST00000544916 GSE1Q14687 1217 aa13.45□□□□□ -0.26
PHC1-214ENST00000544916 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
PHC1-214ENST00000544916 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
PHC1-214ENST00000544916 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms