RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
CIT-216ENST00000544872 RGS17Q9UGC6 210 aaPredicted RBP15.32■□□□□ 0.04
CIT-216ENST00000544872 NCOA1Q15788 1441 aa15.31■□□□□ 0.04
CIT-216ENST00000544872 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
CIT-216ENST00000544872 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
CIT-216ENST00000544872 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
CIT-216ENST00000544872 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.04
CIT-216ENST00000544872 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
CIT-216ENST00000544872 SIGLEC1Q9BZZ2 1709 aa15.27■□□□□ 0.04
CIT-216ENST00000544872 ABCA9Q8IUA7 1624 aa15.27■□□□□ 0.03
CIT-216ENST00000544872 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
CIT-216ENST00000544872 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
CIT-216ENST00000544872 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
CIT-216ENST00000544872 FHOD3Q2V2M9 1422 aa15.24■□□□□ 0.03
CIT-216ENST00000544872 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
CIT-216ENST00000544872 ESF1Q9H501 851 aaKnown RBP15.23■□□□□ 0.03
CIT-216ENST00000544872 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
CIT-216ENST00000544872 ABCA8O94911 1581 aa15.2■□□□□ 0.02
CIT-216ENST00000544872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
CIT-216ENST00000544872 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
CIT-216ENST00000544872 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
CIT-216ENST00000544872 MAGI2Q86UL8 1455 aa15.18■□□□□ 0.02
CIT-216ENST00000544872 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
CIT-216ENST00000544872 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
CIT-216ENST00000544872 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
CIT-216ENST00000544872 SETD1AO15047 1707 aaKnown RBP15.15■□□□□ 0.02
CIT-216ENST00000544872 PKD2Q13563 968 aa15.15■□□□□ 0.02
CIT-216ENST00000544872 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
CIT-216ENST00000544872 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
CIT-216ENST00000544872 ATP10AO60312 1499 aa15.14■□□□□ 0.01
CIT-216ENST00000544872 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
CIT-216ENST00000544872 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
CIT-216ENST00000544872 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
CIT-216ENST00000544872 ATP10BO94823 1461 aa15.12■□□□□ 0.01
CIT-216ENST00000544872 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
CIT-216ENST00000544872 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
CIT-216ENST00000544872 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
CIT-216ENST00000544872 C3P01024 1663 aa15.09■□□□□ 0.01
CIT-216ENST00000544872 FMN1Q68DA7 1419 aa15.08■□□□□ 0
CIT-216ENST00000544872 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
CIT-216ENST00000544872 CLIP1P30622 1438 aa15.07■□□□□ 0
CIT-216ENST00000544872 SRCAPQ6ZRS2 3230 aa15.07■□□□□ 0
CIT-216ENST00000544872 CPS1P31327 1500 aa15.07■□□□□ 0
CIT-216ENST00000544872 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
CIT-216ENST00000544872 SCAPERQ9BY12 1400 aa15.03■□□□□ -0
CIT-216ENST00000544872 PLEKHD1A6NEE1 506 aa15.03■□□□□ -0
CIT-216ENST00000544872 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CIT-216ENST00000544872 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
CIT-216ENST00000544872 TRIM52Q96A61 297 aa15□□□□□ -0.01
CIT-216ENST00000544872 SAMD9Q5K651 1589 aa14.99□□□□□ -0.01
CIT-216ENST00000544872 TCOF1Q13428 1488 aaKnown RBP14.98□□□□□ -0.01
CIT-216ENST00000544872 ARHGAP35Q9NRY4 1499 aa14.98□□□□□ -0.01
CIT-216ENST00000544872 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
CIT-216ENST00000544872 APLP2Q06481 763 aa14.97□□□□□ -0.01
CIT-216ENST00000544872 NPATQ14207 1427 aa14.96□□□□□ -0.01
CIT-216ENST00000544872 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
CIT-216ENST00000544872 ALKQ9UM73 1620 aa14.95□□□□□ -0.02
CIT-216ENST00000544872 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
CIT-216ENST00000544872 FOXD1Q16676 465 aa14.9□□□□□ -0.02
CIT-216ENST00000544872 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
CIT-216ENST00000544872 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
CIT-216ENST00000544872 RAPGEF6Q8TEU7 1601 aa14.88□□□□□ -0.03
CIT-216ENST00000544872 ZMYM3Q14202 1370 aa14.88□□□□□ -0.03
CIT-216ENST00000544872 IFFO2Q5TF58 517 aa14.88□□□□□ -0.03
CIT-216ENST00000544872 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
CIT-216ENST00000544872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.03
CIT-216ENST00000544872 AGLP35573 1532 aa14.87□□□□□ -0.03
CIT-216ENST00000544872 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
CIT-216ENST00000544872 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
CIT-216ENST00000544872 NUP153P49790 1475 aaKnown RBP14.86□□□□□ -0.03
CIT-216ENST00000544872 MYO3AQ8NEV4 1616 aa14.85□□□□□ -0.03
CIT-216ENST00000544872 ZNF142P52746 1687 aaPredicted RBP14.84□□□□□ -0.03
CIT-216ENST00000544872 CCDC18Q5T9S5 1454 aa14.84□□□□□ -0.03
CIT-216ENST00000544872 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
CIT-216ENST00000544872 ZNF518AQ6AHZ1 1483 aa14.83□□□□□ -0.03
CIT-216ENST00000544872 FYCO1Q9BQS8 1478 aa14.83□□□□□ -0.03
CIT-216ENST00000544872 RNF17Q9BXT8 1623 aaKnown RBP14.83□□□□□ -0.04
CIT-216ENST00000544872 DIP2CQ9Y2E4 1556 aa14.82□□□□□ -0.04
CIT-216ENST00000544872 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
CIT-216ENST00000544872 ZNF772Q68DY9 489 aaPredicted RBP14.82□□□□□ -0.04
CIT-216ENST00000544872 RXRBP28702 533 aa14.81□□□□□ -0.04
CIT-216ENST00000544872 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
CIT-216ENST00000544872 LRRC7Q96NW7 1537 aa14.81□□□□□ -0.04
CIT-216ENST00000544872 ANKLE2Q86XL3 938 aa14.8□□□□□ -0.04
CIT-216ENST00000544872 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
CIT-216ENST00000544872 PLCH2O75038 1416 aa14.8□□□□□ -0.04
CIT-216ENST00000544872 VWDEQ8N2E2 1590 aa14.79□□□□□ -0.04
CIT-216ENST00000544872 REREQ9P2R6 1566 aa14.79□□□□□ -0.04
CIT-216ENST00000544872 MROH2AA6NES4 1674 aa14.77□□□□□ -0.05
CIT-216ENST00000544872 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
CIT-216ENST00000544872 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
CIT-216ENST00000544872 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
CIT-216ENST00000544872 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
CIT-216ENST00000544872 ABCA6Q8N139 1617 aa14.74□□□□□ -0.05
CIT-216ENST00000544872 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
CIT-216ENST00000544872 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
CIT-216ENST00000544872 NUTM2BA6NNL0 878 aaPredicted RBP14.73□□□□□ -0.05
CIT-216ENST00000544872 NUTM2EB1AL46 878 aaPredicted RBP14.73□□□□□ -0.05
CIT-216ENST00000544872 NUTM2DQ5VT03 806 aaPredicted RBP14.73□□□□□ -0.05
CIT-216ENST00000544872 NUTM2AQ8IVF1 878 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms