RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
ITGAM-202ENST00000544665 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
ITGAM-202ENST00000544665 RALBP1Q15311 655 aa18.59■□□□□ 0.57
ITGAM-202ENST00000544665 GGT6Q6P531 493 aa18.59■□□□□ 0.57
ITGAM-202ENST00000544665 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
ITGAM-202ENST00000544665 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
ITGAM-202ENST00000544665 ARID4BQ4LE39 1312 aaPredicted RBP18.58■□□□□ 0.56
ITGAM-202ENST00000544665 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
ITGAM-202ENST00000544665 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
ITGAM-202ENST00000544665 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
ITGAM-202ENST00000544665 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
ITGAM-202ENST00000544665 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
ITGAM-202ENST00000544665 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
ITGAM-202ENST00000544665 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
ITGAM-202ENST00000544665 PRKRIP1Q9H875 184 aaPredicted RBP18.52■□□□□ 0.55
ITGAM-202ENST00000544665 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
ITGAM-202ENST00000544665 STK26Q9P289 416 aa18.49■□□□□ 0.55
ITGAM-202ENST00000544665 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
ITGAM-202ENST00000544665 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
ITGAM-202ENST00000544665 KIF3BO15066 747 aa18.48■□□□□ 0.55
ITGAM-202ENST00000544665 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
ITGAM-202ENST00000544665 MLECQ14165 292 aa18.47■□□□□ 0.55
ITGAM-202ENST00000544665 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
ITGAM-202ENST00000544665 MS4A1P11836 297 aa18.46■□□□□ 0.55
ITGAM-202ENST00000544665 LRRC9Q6ZRR7 1453 aa18.45■□□□□ 0.54
ITGAM-202ENST00000544665 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
ITGAM-202ENST00000544665 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
ITGAM-202ENST00000544665 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
ITGAM-202ENST00000544665 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
ITGAM-202ENST00000544665 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
ITGAM-202ENST00000544665 RTN4Q9NQC3 1192 aaKnown RBP18.43■□□□□ 0.54
ITGAM-202ENST00000544665 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
ITGAM-202ENST00000544665 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
ITGAM-202ENST00000544665 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
ITGAM-202ENST00000544665 SOX12O15370 315 aa18.41■□□□□ 0.54
ITGAM-202ENST00000544665 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
ITGAM-202ENST00000544665 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
ITGAM-202ENST00000544665 DEKP35659 375 aaKnown RBP18.41■□□□□ 0.54
ITGAM-202ENST00000544665 USP47Q96K76 1375 aa18.41■□□□□ 0.54
ITGAM-202ENST00000544665 TRIM44Q96DX7 344 aaPredicted RBP18.41■□□□□ 0.54
ITGAM-202ENST00000544665 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
ITGAM-202ENST00000544665 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
ITGAM-202ENST00000544665 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
ITGAM-202ENST00000544665 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
ITGAM-202ENST00000544665 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
ITGAM-202ENST00000544665 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
ITGAM-202ENST00000544665 PANK3Q9H999 370 aa18.38■□□□□ 0.53
ITGAM-202ENST00000544665 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
ITGAM-202ENST00000544665 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
ITGAM-202ENST00000544665 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
ITGAM-202ENST00000544665 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
ITGAM-202ENST00000544665 RRBP1Q9P2E9 1410 aaKnown RBP18.37■□□□□ 0.53
ITGAM-202ENST00000544665 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
ITGAM-202ENST00000544665 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
ITGAM-202ENST00000544665 A0A0G2JS52 829 aa18.36■□□□□ 0.53
ITGAM-202ENST00000544665 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
ITGAM-202ENST00000544665 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
ITGAM-202ENST00000544665 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
ITGAM-202ENST00000544665 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
ITGAM-202ENST00000544665 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
ITGAM-202ENST00000544665 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
ITGAM-202ENST00000544665 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.53
ITGAM-202ENST00000544665 CASKIN1Q8WXD9 1431 aa18.33■□□□□ 0.52
ITGAM-202ENST00000544665 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.52
ITGAM-202ENST00000544665 PTPRGP23470 1445 aa18.32■□□□□ 0.52
ITGAM-202ENST00000544665 CFTRP13569 1480 aa18.32■□□□□ 0.52
ITGAM-202ENST00000544665 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
ITGAM-202ENST00000544665 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
ITGAM-202ENST00000544665 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
ITGAM-202ENST00000544665 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
ITGAM-202ENST00000544665 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
ITGAM-202ENST00000544665 PLIN1O60240 522 aa18.3■□□□□ 0.52
ITGAM-202ENST00000544665 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
ITGAM-202ENST00000544665 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITGAM-202ENST00000544665 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
ITGAM-202ENST00000544665 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
ITGAM-202ENST00000544665 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
ITGAM-202ENST00000544665 CUX1P39880 1505 aa18.28■□□□□ 0.52
ITGAM-202ENST00000544665 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
ITGAM-202ENST00000544665 IPO8O15397 1037 aaKnown RBP18.27■□□□□ 0.52
ITGAM-202ENST00000544665 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
ITGAM-202ENST00000544665 GLIPR1L2Q4G1C9 344 aa18.27■□□□□ 0.52
ITGAM-202ENST00000544665 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.51
ITGAM-202ENST00000544665 HDGFP51858 240 aaKnown RBP18.26■□□□□ 0.51
ITGAM-202ENST00000544665 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
ITGAM-202ENST00000544665 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
ITGAM-202ENST00000544665 APBB1O00213 710 aa18.25■□□□□ 0.51
ITGAM-202ENST00000544665 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
ITGAM-202ENST00000544665 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
ITGAM-202ENST00000544665 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
ITGAM-202ENST00000544665 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
ITGAM-202ENST00000544665 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
ITGAM-202ENST00000544665 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
ITGAM-202ENST00000544665 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
ITGAM-202ENST00000544665 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
ITGAM-202ENST00000544665 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
ITGAM-202ENST00000544665 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
ITGAM-202ENST00000544665 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
ITGAM-202ENST00000544665 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
ITGAM-202ENST00000544665 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms