RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 ADGRL2O95490 1459 aa17.5■□□□□ 0.39
CCDC189-208ENST00000544613 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
CCDC189-208ENST00000544613 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
CCDC189-208ENST00000544613 ABCC2Q92887 1545 aa17.48■□□□□ 0.39
CCDC189-208ENST00000544613 UHRF1BP1LA0JNW5 1464 aa17.48■□□□□ 0.39
CCDC189-208ENST00000544613 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
CCDC189-208ENST00000544613 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
CCDC189-208ENST00000544613 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
CCDC189-208ENST00000544613 PPP1R15AO75807 674 aaPredicted RBP17.46■□□□□ 0.39
CCDC189-208ENST00000544613 ANKRD30AQ9BXX3 1397 aa17.45■□□□□ 0.38
CCDC189-208ENST00000544613 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
CCDC189-208ENST00000544613 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
CCDC189-208ENST00000544613 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
CCDC189-208ENST00000544613 NCOA1Q15788 1441 aa17.44■□□□□ 0.38
CCDC189-208ENST00000544613 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
CCDC189-208ENST00000544613 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
CCDC189-208ENST00000544613 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
CCDC189-208ENST00000544613 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
CCDC189-208ENST00000544613 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
CCDC189-208ENST00000544613 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
CCDC189-208ENST00000544613 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
CCDC189-208ENST00000544613 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
CCDC189-208ENST00000544613 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
CCDC189-208ENST00000544613 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
CCDC189-208ENST00000544613 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
CCDC189-208ENST00000544613 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
CCDC189-208ENST00000544613 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
CCDC189-208ENST00000544613 KDM6BO15054 1643 aa17.36■□□□□ 0.37
CCDC189-208ENST00000544613 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
CCDC189-208ENST00000544613 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
CCDC189-208ENST00000544613 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
CCDC189-208ENST00000544613 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
CCDC189-208ENST00000544613 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.37
CCDC189-208ENST00000544613 MBD5Q9P267 1494 aa17.33■□□□□ 0.37
CCDC189-208ENST00000544613 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
CCDC189-208ENST00000544613 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
CCDC189-208ENST00000544613 MIER1Q8N108 512 aa17.3■□□□□ 0.36
CCDC189-208ENST00000544613 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
CCDC189-208ENST00000544613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC189-208ENST00000544613 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
CCDC189-208ENST00000544613 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
CCDC189-208ENST00000544613 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
CCDC189-208ENST00000544613 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
CCDC189-208ENST00000544613 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
CCDC189-208ENST00000544613 PZPP20742 1482 aa17.28■□□□□ 0.36
CCDC189-208ENST00000544613 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
CCDC189-208ENST00000544613 PLCH2O75038 1416 aa17.27■□□□□ 0.35
CCDC189-208ENST00000544613 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.35
CCDC189-208ENST00000544613 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
CCDC189-208ENST00000544613 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
CCDC189-208ENST00000544613 KIF15Q9NS87 1388 aa17.25■□□□□ 0.35
CCDC189-208ENST00000544613 TTC37Q6PGP7 1564 aa17.24■□□□□ 0.35
CCDC189-208ENST00000544613 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
CCDC189-208ENST00000544613 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC189-208ENST00000544613 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
CCDC189-208ENST00000544613 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
CCDC189-208ENST00000544613 SYCP2Q9BX26 1530 aa17.19■□□□□ 0.34
CCDC189-208ENST00000544613 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
CCDC189-208ENST00000544613 NUP155O75694 1391 aa17.18■□□□□ 0.34
CCDC189-208ENST00000544613 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
CCDC189-208ENST00000544613 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
CCDC189-208ENST00000544613 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
CCDC189-208ENST00000544613 PKD2Q13563 968 aa17.15■□□□□ 0.34
CCDC189-208ENST00000544613 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
CCDC189-208ENST00000544613 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
CCDC189-208ENST00000544613 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
CCDC189-208ENST00000544613 ABCC1P33527 1531 aa17.14■□□□□ 0.33
CCDC189-208ENST00000544613 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC189-208ENST00000544613 FOXD1Q16676 465 aa17.12■□□□□ 0.33
CCDC189-208ENST00000544613 UNC13BO14795 1591 aa17.11■□□□□ 0.33
CCDC189-208ENST00000544613 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
CCDC189-208ENST00000544613 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
CCDC189-208ENST00000544613 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.32
CCDC189-208ENST00000544613 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC189-208ENST00000544613 MAGI2Q86UL8 1455 aa17.07■□□□□ 0.32
CCDC189-208ENST00000544613 UHRF1BP1Q6BDS2 1440 aa17.07■□□□□ 0.32
CCDC189-208ENST00000544613 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
CCDC189-208ENST00000544613 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
CCDC189-208ENST00000544613 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
CCDC189-208ENST00000544613 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
CCDC189-208ENST00000544613 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
CCDC189-208ENST00000544613 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
CCDC189-208ENST00000544613 ANP32CO43423 234 aa17.03■□□□□ 0.32
CCDC189-208ENST00000544613 FANCAO15360 1455 aa17.03■□□□□ 0.32
CCDC189-208ENST00000544613 ATP10AO60312 1499 aa17.03■□□□□ 0.32
CCDC189-208ENST00000544613 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
CCDC189-208ENST00000544613 NBPF8Q3BBV2 869 aa17■□□□□ 0.31
CCDC189-208ENST00000544613 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
CCDC189-208ENST00000544613 ARID4BQ4LE39 1312 aaPredicted RBP16.99■□□□□ 0.31
CCDC189-208ENST00000544613 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
CCDC189-208ENST00000544613 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
CCDC189-208ENST00000544613 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
CCDC189-208ENST00000544613 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
CCDC189-208ENST00000544613 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
CCDC189-208ENST00000544613 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
CCDC189-208ENST00000544613 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
CCDC189-208ENST00000544613 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
CCDC189-208ENST00000544613 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
CCDC189-208ENST00000544613 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
CCDC189-208ENST00000544613 SCAPERQ9BY12 1400 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms