RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
GRAMD2B-219ENST00000544396 SUPT6HQ7KZ85 1726 aaKnown RBP25.66■■□□□ 1.7
GRAMD2B-219ENST00000544396 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
GRAMD2B-219ENST00000544396 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
GRAMD2B-219ENST00000544396 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
GRAMD2B-219ENST00000544396 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.7
GRAMD2B-219ENST00000544396 POLR3GLQ9BT43 218 aa25.64■■□□□ 1.69
GRAMD2B-219ENST00000544396 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
GRAMD2B-219ENST00000544396 UBE2Q2Q8WVN8 375 aa25.63■■□□□ 1.69
GRAMD2B-219ENST00000544396 CUL7Q14999 1698 aa25.63■■□□□ 1.69
GRAMD2B-219ENST00000544396 HECW1Q76N89 1606 aa25.61■■□□□ 1.69
GRAMD2B-219ENST00000544396 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
GRAMD2B-219ENST00000544396 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
GRAMD2B-219ENST00000544396 SMG6Q86US8 1419 aaKnown RBP25.58■■□□□ 1.69
GRAMD2B-219ENST00000544396 NUDCQ9Y266 331 aa25.58■■□□□ 1.68
GRAMD2B-219ENST00000544396 ANKRD30BQ9BXX2 1392 aa25.57■■□□□ 1.68
GRAMD2B-219ENST00000544396 NESP48681 1621 aa25.57■■□□□ 1.68
GRAMD2B-219ENST00000544396 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
GRAMD2B-219ENST00000544396 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
GRAMD2B-219ENST00000544396 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
GRAMD2B-219ENST00000544396 IPO9Q96P70 1041 aaKnown RBP25.55■■□□□ 1.68
GRAMD2B-219ENST00000544396 ANP32AP39687 249 aaKnown RBP25.53■■□□□ 1.68
GRAMD2B-219ENST00000544396 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.67
GRAMD2B-219ENST00000544396 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
GRAMD2B-219ENST00000544396 SLC4A1APQ9BWU0 796 aaKnown RBP25.51■■□□□ 1.67
GRAMD2B-219ENST00000544396 TEX14Q8IWB6 1497 aa25.51■■□□□ 1.67
GRAMD2B-219ENST00000544396 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
GRAMD2B-219ENST00000544396 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
GRAMD2B-219ENST00000544396 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
GRAMD2B-219ENST00000544396 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
GRAMD2B-219ENST00000544396 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
GRAMD2B-219ENST00000544396 ZNF644Q9H582 1327 aaPredicted RBP25.46■■□□□ 1.67
GRAMD2B-219ENST00000544396 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
GRAMD2B-219ENST00000544396 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
GRAMD2B-219ENST00000544396 NPM2Q86SE8 214 aaKnown RBP25.42■■□□□ 1.66
GRAMD2B-219ENST00000544396 PNISRQ8TF01 805 aaKnown RBP25.41■■□□□ 1.66
GRAMD2B-219ENST00000544396 EPRSP07814 1512 aaKnown RBP25.4■■□□□ 1.66
GRAMD2B-219ENST00000544396 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
GRAMD2B-219ENST00000544396 MIA2Q96PC5 1412 aa25.39■■□□□ 1.66
GRAMD2B-219ENST00000544396 TMC1Q8TDI8 760 aa25.38■■□□□ 1.65
GRAMD2B-219ENST00000544396 USP47Q96K76 1375 aa25.37■■□□□ 1.65
GRAMD2B-219ENST00000544396 DAPK1P53355 1430 aa25.36■■□□□ 1.65
GRAMD2B-219ENST00000544396 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
GRAMD2B-219ENST00000544396 ABCC5O15440 1437 aa25.35■■□□□ 1.65
GRAMD2B-219ENST00000544396 EXOC6Q8TAG9 804 aa25.33■■□□□ 1.65
GRAMD2B-219ENST00000544396 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
GRAMD2B-219ENST00000544396 LAS1LQ9Y4W2 734 aaKnown RBP25.3■■□□□ 1.64
GRAMD2B-219ENST00000544396 ROCK1Q13464 1354 aa25.3■■□□□ 1.64
GRAMD2B-219ENST00000544396 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
GRAMD2B-219ENST00000544396 EIF5BO60841 1220 aaKnown RBP25.28■■□□□ 1.64
GRAMD2B-219ENST00000544396 POLR1AO95602 1720 aaPredicted RBP25.27■■□□□ 1.64
GRAMD2B-219ENST00000544396 RRP1P56182 461 aaKnown RBP25.26■■□□□ 1.63
GRAMD2B-219ENST00000544396 PZPP20742 1482 aa25.25■■□□□ 1.63
GRAMD2B-219ENST00000544396 PDE4AP27815 886 aa25.23■■□□□ 1.63
GRAMD2B-219ENST00000544396 PKD2Q13563 968 aa25.23■■□□□ 1.63
GRAMD2B-219ENST00000544396 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
GRAMD2B-219ENST00000544396 SKAP1Q86WV1 359 aa25.2■■□□□ 1.62
GRAMD2B-219ENST00000544396 NEFMP07197 916 aa25.19■■□□□ 1.62
GRAMD2B-219ENST00000544396 RCAN3Q9UKA8 241 aa25.19■■□□□ 1.62
GRAMD2B-219ENST00000544396 WDR62O43379 1518 aa25.19■■□□□ 1.62
GRAMD2B-219ENST00000544396 CARD11Q9BXL7 1154 aa25.18■■□□□ 1.62
GRAMD2B-219ENST00000544396 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
GRAMD2B-219ENST00000544396 TCERG1O14776 1098 aaKnown RBP25.18■■□□□ 1.62
GRAMD2B-219ENST00000544396 LRPPRCP42704 1394 aaKnown RBP25.17■■□□□ 1.62
GRAMD2B-219ENST00000544396 DNMT1P26358 1616 aaKnown RBP25.17■■□□□ 1.62
GRAMD2B-219ENST00000544396 KDM2AQ9Y2K7 1162 aa25.17■■□□□ 1.62
GRAMD2B-219ENST00000544396 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
GRAMD2B-219ENST00000544396 ZNF777Q9ULD5 760 aaPredicted RBP25.16■■□□□ 1.62
GRAMD2B-219ENST00000544396 BACH2Q9BYV9 841 aa25.15■■□□□ 1.62
GRAMD2B-219ENST00000544396 KIF15Q9NS87 1388 aa25.14■■□□□ 1.62
GRAMD2B-219ENST00000544396 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.62
GRAMD2B-219ENST00000544396 ARID4BQ4LE39 1312 aaPredicted RBP25.14■■□□□ 1.61
GRAMD2B-219ENST00000544396 CDCA7LQ96GN5 454 aa25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 KDM5CP41229 1560 aa25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 MYBBP1AQ9BQG0 1328 aaKnown RBP25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 IQGAP2Q13576 1575 aa25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 PLIN1O60240 522 aa25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 BRPF3Q9ULD4 1205 aa25.13■■□□□ 1.61
GRAMD2B-219ENST00000544396 CFDP1Q9UEE9 299 aaPredicted RBP25.1■■□□□ 1.61
GRAMD2B-219ENST00000544396 BRD4O60885 1362 aaPredicted RBP25.1■■□□□ 1.61
GRAMD2B-219ENST00000544396 ROCK2O75116 1388 aaKnown RBP25.09■■□□□ 1.61
GRAMD2B-219ENST00000544396 RALBP1Q15311 655 aa25.06■■□□□ 1.6
GRAMD2B-219ENST00000544396 KIF14Q15058 1648 aa25.04■■□□□ 1.6
GRAMD2B-219ENST00000544396 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
GRAMD2B-219ENST00000544396 NUP153P49790 1475 aaKnown RBP25.03■■□□□ 1.6
GRAMD2B-219ENST00000544396 DCAF11Q8TEB1 546 aa25.03■■□□□ 1.6
GRAMD2B-219ENST00000544396 PKNOX2Q96KN3 472 aa25.03■■□□□ 1.6
GRAMD2B-219ENST00000544396 MS4A1P11836 297 aa25.02■■□□□ 1.6
GRAMD2B-219ENST00000544396 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.59
GRAMD2B-219ENST00000544396 RALGAPBQ86X10 1494 aa25.01■■□□□ 1.59
GRAMD2B-219ENST00000544396 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
GRAMD2B-219ENST00000544396 WASHC2CQ9Y4E1 1318 aa25■■□□□ 1.59
GRAMD2B-219ENST00000544396 CRBNQ96SW2 442 aa24.99■■□□□ 1.59
GRAMD2B-219ENST00000544396 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
GRAMD2B-219ENST00000544396 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
GRAMD2B-219ENST00000544396 SLC4A3P48751 1232 aa24.99■■□□□ 1.59
GRAMD2B-219ENST00000544396 USP35Q9P2H5 1018 aa24.99■■□□□ 1.59
GRAMD2B-219ENST00000544396 NUP155O75694 1391 aa24.98■■□□□ 1.59
GRAMD2B-219ENST00000544396 NLRP13Q86W25 1043 aa24.98■■□□□ 1.59
GRAMD2B-219ENST00000544396 PPM1GO15355 546 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms