RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
PTPRO-209ENST00000543886 ZNF644Q9H582 1327 aaPredicted RBP24.69■■□□□ 1.54
PTPRO-209ENST00000543886 KDM6BO15054 1643 aa24.66■■□□□ 1.54
PTPRO-209ENST00000543886 CDC42BPAQ5VT25 1732 aa24.63■■□□□ 1.53
PTPRO-209ENST00000543886 ABCC10Q5T3U5 1492 aa24.63■■□□□ 1.53
PTPRO-209ENST00000543886 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
PTPRO-209ENST00000543886 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PTPRO-209ENST00000543886 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
PTPRO-209ENST00000543886 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
PTPRO-209ENST00000543886 CROCC2H7BZ55 1655 aa24.6■■□□□ 1.53
PTPRO-209ENST00000543886 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
PTPRO-209ENST00000543886 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
PTPRO-209ENST00000543886 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
PTPRO-209ENST00000543886 ABCC2Q92887 1545 aa24.55■■□□□ 1.52
PTPRO-209ENST00000543886 ADGRL2O95490 1459 aa24.52■■□□□ 1.52
PTPRO-209ENST00000543886 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
PTPRO-209ENST00000543886 MIER1Q8N108 512 aa24.52■■□□□ 1.52
PTPRO-209ENST00000543886 DENND4BO75064 1496 aaPredicted RBP24.51■■□□□ 1.51
PTPRO-209ENST00000543886 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
PTPRO-209ENST00000543886 NCOA1Q15788 1441 aa24.49■■□□□ 1.51
PTPRO-209ENST00000543886 PREX2Q70Z35 1606 aa24.48■■□□□ 1.51
PTPRO-209ENST00000543886 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
PTPRO-209ENST00000543886 ANKRD30AQ9BXX3 1397 aa24.47■■□□□ 1.51
PTPRO-209ENST00000543886 SHANK2Q9UPX8 1470 aa24.47■■□□□ 1.51
PTPRO-209ENST00000543886 CDC42BPBQ9Y5S2 1711 aa24.43■■□□□ 1.5
PTPRO-209ENST00000543886 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
PTPRO-209ENST00000543886 C9orf84Q5VXU9 1444 aa24.42■■□□□ 1.5
PTPRO-209ENST00000543886 UHRF1BP1LA0JNW5 1464 aa24.41■■□□□ 1.5
PTPRO-209ENST00000543886 TTC37Q6PGP7 1564 aa24.4■■□□□ 1.5
PTPRO-209ENST00000543886 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.5
PTPRO-209ENST00000543886 CENPBP07199 599 aaPredicted RBP24.39■■□□□ 1.5
PTPRO-209ENST00000543886 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
PTPRO-209ENST00000543886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.49
PTPRO-209ENST00000543886 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
PTPRO-209ENST00000543886 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
PTPRO-209ENST00000543886 SLC4A1APQ9BWU0 796 aaKnown RBP24.37■■□□□ 1.49
PTPRO-209ENST00000543886 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
PTPRO-209ENST00000543886 MYO5CQ9NQX4 1742 aa24.36■■□□□ 1.49
PTPRO-209ENST00000543886 ARHGAP5Q13017 1502 aa24.36■■□□□ 1.49
PTPRO-209ENST00000543886 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
PTPRO-209ENST00000543886 CCDC141Q6ZP82 1450 aa24.34■■□□□ 1.49
PTPRO-209ENST00000543886 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
PTPRO-209ENST00000543886 FOXD1Q16676 465 aa24.34■■□□□ 1.49
PTPRO-209ENST00000543886 PZPP20742 1482 aa24.34■■□□□ 1.49
PTPRO-209ENST00000543886 HNRNPMP52272 730 aaKnown RBP eCLIP24.33■■□□□ 1.49
PTPRO-209ENST00000543886 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
PTPRO-209ENST00000543886 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
PTPRO-209ENST00000543886 RSPH4AQ5TD94 716 aa24.3■■□□□ 1.48
PTPRO-209ENST00000543886 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
PTPRO-209ENST00000543886 SYCP2Q9BX26 1530 aa24.29■■□□□ 1.48
PTPRO-209ENST00000543886 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
PTPRO-209ENST00000543886 KIF15Q9NS87 1388 aa24.27■■□□□ 1.48
PTPRO-209ENST00000543886 PLEKHH2Q8IVE3 1493 aa24.27■■□□□ 1.48
PTPRO-209ENST00000543886 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
PTPRO-209ENST00000543886 KIAA1107Q9UPP5 1409 aa24.24■■□□□ 1.47
PTPRO-209ENST00000543886 MAST1Q9Y2H9 1570 aa24.23■■□□□ 1.47
PTPRO-209ENST00000543886 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
PTPRO-209ENST00000543886 L3MBTL2Q969R5 705 aa24.21■■□□□ 1.47
PTPRO-209ENST00000543886 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
PTPRO-209ENST00000543886 PLCH2O75038 1416 aa24.21■■□□□ 1.47
PTPRO-209ENST00000543886 NUP155O75694 1391 aa24.2■■□□□ 1.46
PTPRO-209ENST00000543886 TEX14Q8IWB6 1497 aa24.19■■□□□ 1.46
PTPRO-209ENST00000543886 PKD2Q13563 968 aa24.18■■□□□ 1.46
PTPRO-209ENST00000543886 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
PTPRO-209ENST00000543886 PLXNC1O60486 1568 aa24.15■■□□□ 1.46
PTPRO-209ENST00000543886 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
PTPRO-209ENST00000543886 WDR7Q9Y4E6 1490 aa24.14■■□□□ 1.45
PTPRO-209ENST00000543886 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
PTPRO-209ENST00000543886 ABCC1P33527 1531 aa24.12■■□□□ 1.45
PTPRO-209ENST00000543886 ARAP3Q8WWN8 1544 aa24.11■■□□□ 1.45
PTPRO-209ENST00000543886 ARHGEF12Q9NZN5 1544 aa24.11■■□□□ 1.45
PTPRO-209ENST00000543886 UNC13BO14795 1591 aa24.07■■□□□ 1.44
PTPRO-209ENST00000543886 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
PTPRO-209ENST00000543886 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
PTPRO-209ENST00000543886 DUOX2Q9NRD8 1548 aa24.06■■□□□ 1.44
PTPRO-209ENST00000543886 HSPA5P11021 654 aaKnown RBP24.06■■□□□ 1.44
PTPRO-209ENST00000543886 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
PTPRO-209ENST00000543886 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
PTPRO-209ENST00000543886 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
PTPRO-209ENST00000543886 TRAPPC8Q9Y2L5 1435 aa24.01■■□□□ 1.43
PTPRO-209ENST00000543886 ASXL2Q76L83 1435 aa24■■□□□ 1.43
PTPRO-209ENST00000543886 IQGAP3Q86VI3 1631 aa23.98■■□□□ 1.43
PTPRO-209ENST00000543886 FANCAO15360 1455 aa23.97■■□□□ 1.43
PTPRO-209ENST00000543886 ANP32CO43423 234 aa23.96■■□□□ 1.43
PTPRO-209ENST00000543886 NPM1P06748 294 aaKnown RBP eCLIP23.95■■□□□ 1.42
PTPRO-209ENST00000543886 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
PTPRO-209ENST00000543886 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
PTPRO-209ENST00000543886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.42
PTPRO-209ENST00000543886 MAGI2Q86UL8 1455 aa23.93■■□□□ 1.42
PTPRO-209ENST00000543886 GTF3C3Q9Y5Q9 886 aa23.93■■□□□ 1.42
PTPRO-209ENST00000543886 ZFYVE16Q7Z3T8 1539 aa23.93■■□□□ 1.42
PTPRO-209ENST00000543886 WASHC2AQ641Q2 1341 aa23.92■■□□□ 1.42
PTPRO-209ENST00000543886 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
PTPRO-209ENST00000543886 AFAP1Q8N556 730 aa23.89■■□□□ 1.41
PTPRO-209ENST00000543886 UHRF1BP1Q6BDS2 1440 aa23.89■■□□□ 1.41
PTPRO-209ENST00000543886 ADGRL1O94910 1474 aa23.89■■□□□ 1.41
PTPRO-209ENST00000543886 CCDC144AA2RUR9 1427 aa23.88■■□□□ 1.41
PTPRO-209ENST00000543886 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
PTPRO-209ENST00000543886 INO80Q9ULG1 1556 aaPredicted RBP23.87■■□□□ 1.41
PTPRO-209ENST00000543886 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms