RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
GABPB1-206ENST00000543881 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
GABPB1-206ENST00000543881 SCAPERQ9BY12 1400 aa19.7■□□□□ 0.74
GABPB1-206ENST00000543881 CDK13Q14004 1512 aaKnown RBP19.69■□□□□ 0.74
GABPB1-206ENST00000543881 PLCH2O75038 1416 aa19.68■□□□□ 0.74
GABPB1-206ENST00000543881 ATP10AO60312 1499 aa19.65■□□□□ 0.74
GABPB1-206ENST00000543881 ARHGEF12Q9NZN5 1544 aa19.64■□□□□ 0.74
GABPB1-206ENST00000543881 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
GABPB1-206ENST00000543881 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
GABPB1-206ENST00000543881 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
GABPB1-206ENST00000543881 EFCAB2Q5VUJ9 269 aa19.61■□□□□ 0.73
GABPB1-206ENST00000543881 MYO5CQ9NQX4 1742 aa19.61■□□□□ 0.73
GABPB1-206ENST00000543881 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
GABPB1-206ENST00000543881 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
GABPB1-206ENST00000543881 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
GABPB1-206ENST00000543881 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
GABPB1-206ENST00000543881 CDK11AQ9UQ88 783 aaPredicted RBP19.55■□□□□ 0.72
GABPB1-206ENST00000543881 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
GABPB1-206ENST00000543881 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
GABPB1-206ENST00000543881 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
GABPB1-206ENST00000543881 KIF14Q15058 1648 aa19.54■□□□□ 0.72
GABPB1-206ENST00000543881 AFAP1Q8N556 730 aa19.54■□□□□ 0.72
GABPB1-206ENST00000543881 KDM5CP41229 1560 aa19.52■□□□□ 0.72
GABPB1-206ENST00000543881 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
GABPB1-206ENST00000543881 ARHGAP5Q13017 1502 aa19.52■□□□□ 0.72
GABPB1-206ENST00000543881 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
GABPB1-206ENST00000543881 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
GABPB1-206ENST00000543881 TROQ12816 1431 aaPredicted RBP19.5■□□□□ 0.71
GABPB1-206ENST00000543881 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
GABPB1-206ENST00000543881 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
GABPB1-206ENST00000543881 CLIP1P30622 1438 aa19.47■□□□□ 0.71
GABPB1-206ENST00000543881 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
GABPB1-206ENST00000543881 ILDR2Q71H61 639 aa19.46■□□□□ 0.71
GABPB1-206ENST00000543881 C3P01024 1663 aa19.45■□□□□ 0.7
GABPB1-206ENST00000543881 ABCA6Q8N139 1617 aa19.44■□□□□ 0.7
GABPB1-206ENST00000543881 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
GABPB1-206ENST00000543881 CDC42BPBQ9Y5S2 1711 aa19.44■□□□□ 0.7
GABPB1-206ENST00000543881 LRRIQ1Q96JM4 1722 aa19.44■□□□□ 0.7
GABPB1-206ENST00000543881 PTPRTO14522 1441 aa19.43■□□□□ 0.7
GABPB1-206ENST00000543881 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
GABPB1-206ENST00000543881 AGLP35573 1532 aa19.41■□□□□ 0.7
GABPB1-206ENST00000543881 TRAPPC8Q9Y2L5 1435 aa19.4■□□□□ 0.7
GABPB1-206ENST00000543881 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
GABPB1-206ENST00000543881 ABCC1P33527 1531 aa19.39■□□□□ 0.69
GABPB1-206ENST00000543881 SOCS7O14512 581 aa19.39■□□□□ 0.69
GABPB1-206ENST00000543881 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
GABPB1-206ENST00000543881 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
GABPB1-206ENST00000543881 KIDINS220Q9ULH0 1771 aa19.35■□□□□ 0.69
GABPB1-206ENST00000543881 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
GABPB1-206ENST00000543881 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
GABPB1-206ENST00000543881 SPATA31D1Q6ZQQ2 1576 aa19.33■□□□□ 0.69
GABPB1-206ENST00000543881 CASKIN1Q8WXD9 1431 aa19.33■□□□□ 0.68
GABPB1-206ENST00000543881 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
GABPB1-206ENST00000543881 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
GABPB1-206ENST00000543881 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
GABPB1-206ENST00000543881 CAMSAP1Q5T5Y3 1602 aa19.28■□□□□ 0.68
GABPB1-206ENST00000543881 NPATQ14207 1427 aa19.28■□□□□ 0.68
GABPB1-206ENST00000543881 MROH2AA6NES4 1674 aa19.28■□□□□ 0.68
GABPB1-206ENST00000543881 SAMD9LQ8IVG5 1584 aa19.28■□□□□ 0.68
GABPB1-206ENST00000543881 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.67
GABPB1-206ENST00000543881 ZMYM3Q14202 1370 aa19.26■□□□□ 0.67
GABPB1-206ENST00000543881 SUPT6HQ7KZ85 1726 aaKnown RBP19.24■□□□□ 0.67
GABPB1-206ENST00000543881 FYCO1Q9BQS8 1478 aa19.24■□□□□ 0.67
GABPB1-206ENST00000543881 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
GABPB1-206ENST00000543881 NCKAP5LQ9HCH0 1330 aa19.24■□□□□ 0.67
GABPB1-206ENST00000543881 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
GABPB1-206ENST00000543881 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
GABPB1-206ENST00000543881 ZNF335Q9H4Z2 1342 aaPredicted RBP19.21■□□□□ 0.67
GABPB1-206ENST00000543881 CLTCQ00610 1675 aaKnown RBP19.21■□□□□ 0.67
GABPB1-206ENST00000543881 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
GABPB1-206ENST00000543881 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
GABPB1-206ENST00000543881 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
GABPB1-206ENST00000543881 MYO3AQ8NEV4 1616 aa19.18■□□□□ 0.66
GABPB1-206ENST00000543881 ZNF142P52746 1687 aaPredicted RBP19.18■□□□□ 0.66
GABPB1-206ENST00000543881 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
GABPB1-206ENST00000543881 A2MP01023 1474 aa19.17■□□□□ 0.66
GABPB1-206ENST00000543881 PLA2R1Q13018 1463 aa19.17■□□□□ 0.66
GABPB1-206ENST00000543881 PKD2Q13563 968 aa19.17■□□□□ 0.66
GABPB1-206ENST00000543881 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
GABPB1-206ENST00000543881 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
GABPB1-206ENST00000543881 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
GABPB1-206ENST00000543881 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
GABPB1-206ENST00000543881 GGT6Q6P531 493 aa19.16■□□□□ 0.66
GABPB1-206ENST00000543881 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
GABPB1-206ENST00000543881 TCOF1Q13428 1488 aaKnown RBP19.14■□□□□ 0.66
GABPB1-206ENST00000543881 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.66
GABPB1-206ENST00000543881 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
GABPB1-206ENST00000543881 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
GABPB1-206ENST00000543881 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
GABPB1-206ENST00000543881 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
GABPB1-206ENST00000543881 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
GABPB1-206ENST00000543881 DNMT1P26358 1616 aaKnown RBP19.06■□□□□ 0.64
GABPB1-206ENST00000543881 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
GABPB1-206ENST00000543881 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
GABPB1-206ENST00000543881 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
GABPB1-206ENST00000543881 MBD5Q9P267 1494 aa19.02■□□□□ 0.63
GABPB1-206ENST00000543881 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
GABPB1-206ENST00000543881 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
GABPB1-206ENST00000543881 POLR1AO95602 1720 aaPredicted RBP19.01■□□□□ 0.63
GABPB1-206ENST00000543881 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms