RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 ROCK1Q13464 1354 aa23■■□□□ 1.27
SCNN1A-221ENST00000543768 ZNF644Q9H582 1327 aaPredicted RBP22.99■■□□□ 1.27
SCNN1A-221ENST00000543768 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
SCNN1A-221ENST00000543768 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
SCNN1A-221ENST00000543768 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
SCNN1A-221ENST00000543768 DDX10Q13206 875 aaKnown RBP22.94■■□□□ 1.26
SCNN1A-221ENST00000543768 KIF14Q15058 1648 aa22.94■■□□□ 1.26
SCNN1A-221ENST00000543768 ITSN2Q9NZM3 1697 aa22.94■■□□□ 1.26
SCNN1A-221ENST00000543768 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
SCNN1A-221ENST00000543768 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
SCNN1A-221ENST00000543768 ABCA8O94911 1581 aa22.93■■□□□ 1.26
SCNN1A-221ENST00000543768 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
SCNN1A-221ENST00000543768 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
SCNN1A-221ENST00000543768 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.25
SCNN1A-221ENST00000543768 ATP10BO94823 1461 aa22.86■■□□□ 1.25
SCNN1A-221ENST00000543768 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
SCNN1A-221ENST00000543768 ADGBQ8N7X0 1667 aa22.82■■□□□ 1.24
SCNN1A-221ENST00000543768 FOXD1Q16676 465 aa22.82■■□□□ 1.24
SCNN1A-221ENST00000543768 NCOA1Q15788 1441 aa22.82■■□□□ 1.24
SCNN1A-221ENST00000543768 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
SCNN1A-221ENST00000543768 CDC42BPAQ5VT25 1732 aa22.81■■□□□ 1.24
SCNN1A-221ENST00000543768 PLEKHD1A6NEE1 506 aa22.81■■□□□ 1.24
SCNN1A-221ENST00000543768 ANKRD30BQ9BXX2 1392 aa22.81■■□□□ 1.24
SCNN1A-221ENST00000543768 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
SCNN1A-221ENST00000543768 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
SCNN1A-221ENST00000543768 ZNF777Q9ULD5 760 aaPredicted RBP22.78■■□□□ 1.24
SCNN1A-221ENST00000543768 CHD1O14646 1710 aa22.78■■□□□ 1.24
SCNN1A-221ENST00000543768 RPRD2Q5VT52 1461 aaKnown RBP22.76■■□□□ 1.23
SCNN1A-221ENST00000543768 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
SCNN1A-221ENST00000543768 PTPRGP23470 1445 aa22.75■■□□□ 1.23
SCNN1A-221ENST00000543768 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
SCNN1A-221ENST00000543768 PZPP20742 1482 aa22.74■■□□□ 1.23
SCNN1A-221ENST00000543768 ANKRD30AQ9BXX3 1397 aa22.7■■□□□ 1.22
SCNN1A-221ENST00000543768 TEX14Q8IWB6 1497 aa22.69■■□□□ 1.22
SCNN1A-221ENST00000543768 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
SCNN1A-221ENST00000543768 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
SCNN1A-221ENST00000543768 ANP32CO43423 234 aa22.68■■□□□ 1.22
SCNN1A-221ENST00000543768 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
SCNN1A-221ENST00000543768 SHANK2Q9UPX8 1470 aa22.67■■□□□ 1.22
SCNN1A-221ENST00000543768 ANKRD50Q9ULJ7 1429 aa22.64■■□□□ 1.22
SCNN1A-221ENST00000543768 EIF4G2P78344 907 aaKnown RBP eCLIP22.64■■□□□ 1.21
SCNN1A-221ENST00000543768 C9orf84Q5VXU9 1444 aa22.63■■□□□ 1.21
SCNN1A-221ENST00000543768 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
SCNN1A-221ENST00000543768 WASHC2AQ641Q2 1341 aa22.62■■□□□ 1.21
SCNN1A-221ENST00000543768 KIAA1107Q9UPP5 1409 aa22.61■■□□□ 1.21
SCNN1A-221ENST00000543768 CDC42BPBQ9Y5S2 1711 aa22.61■■□□□ 1.21
SCNN1A-221ENST00000543768 ARHGEF5Q12774 1597 aa22.61■■□□□ 1.21
SCNN1A-221ENST00000543768 MBD5Q9P267 1494 aa22.59■■□□□ 1.21
SCNN1A-221ENST00000543768 PREX2Q70Z35 1606 aa22.59■■□□□ 1.21
SCNN1A-221ENST00000543768 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
SCNN1A-221ENST00000543768 HNRNPMP52272 730 aaKnown RBP eCLIP22.57■■□□□ 1.2
SCNN1A-221ENST00000543768 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
SCNN1A-221ENST00000543768 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
SCNN1A-221ENST00000543768 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
SCNN1A-221ENST00000543768 PKD2Q13563 968 aa22.56■■□□□ 1.2
SCNN1A-221ENST00000543768 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
SCNN1A-221ENST00000543768 SPATA31E1Q6ZUB1 1445 aa22.52■■□□□ 1.2
SCNN1A-221ENST00000543768 ABCC2Q92887 1545 aa22.52■■□□□ 1.2
SCNN1A-221ENST00000543768 NUP155O75694 1391 aa22.52■■□□□ 1.19
SCNN1A-221ENST00000543768 KIF15Q9NS87 1388 aa22.52■■□□□ 1.19
SCNN1A-221ENST00000543768 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.19
SCNN1A-221ENST00000543768 CCDC141Q6ZP82 1450 aa22.51■■□□□ 1.19
SCNN1A-221ENST00000543768 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
SCNN1A-221ENST00000543768 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
SCNN1A-221ENST00000543768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCNN1A-221ENST00000543768 CCDC7Q96M83 1385 aa22.48■■□□□ 1.19
SCNN1A-221ENST00000543768 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
SCNN1A-221ENST00000543768 CNTLNQ9NXG0 1405 aa22.47■■□□□ 1.19
SCNN1A-221ENST00000543768 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
SCNN1A-221ENST00000543768 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
SCNN1A-221ENST00000543768 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
SCNN1A-221ENST00000543768 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
SCNN1A-221ENST00000543768 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
SCNN1A-221ENST00000543768 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
SCNN1A-221ENST00000543768 KIF7Q2M1P5 1343 aa22.39■■□□□ 1.17
SCNN1A-221ENST00000543768 UHRF1BP1Q6BDS2 1440 aa22.38■■□□□ 1.17
SCNN1A-221ENST00000543768 ZCCHC11Q5TAX3 1644 aaKnown RBP22.38■■□□□ 1.17
SCNN1A-221ENST00000543768 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
SCNN1A-221ENST00000543768 FAM135AQ9P2D6 1515 aa22.37■■□□□ 1.17
SCNN1A-221ENST00000543768 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
SCNN1A-221ENST00000543768 PLEKHH2Q8IVE3 1493 aa22.35■■□□□ 1.17
SCNN1A-221ENST00000543768 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
SCNN1A-221ENST00000543768 KDM5CP41229 1560 aa22.34■■□□□ 1.17
SCNN1A-221ENST00000543768 USP47Q96K76 1375 aa22.34■■□□□ 1.17
SCNN1A-221ENST00000543768 UNC13BO14795 1591 aa22.33■■□□□ 1.17
SCNN1A-221ENST00000543768 PLXNC1O60486 1568 aa22.33■■□□□ 1.17
SCNN1A-221ENST00000543768 BCORL1Q5H9F3 1711 aa22.33■■□□□ 1.16
SCNN1A-221ENST00000543768 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
SCNN1A-221ENST00000543768 PLCH2O75038 1416 aa22.32■■□□□ 1.16
SCNN1A-221ENST00000543768 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
SCNN1A-221ENST00000543768 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
SCNN1A-221ENST00000543768 DUOX2Q9NRD8 1548 aa22.25■■□□□ 1.15
SCNN1A-221ENST00000543768 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
SCNN1A-221ENST00000543768 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
SCNN1A-221ENST00000543768 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
SCNN1A-221ENST00000543768 DCAF11Q8TEB1 546 aa22.24■■□□□ 1.15
SCNN1A-221ENST00000543768 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
SCNN1A-221ENST00000543768 ABCC1P33527 1531 aa22.24■■□□□ 1.15
SCNN1A-221ENST00000543768 PLA2R1Q13018 1463 aa22.23■■□□□ 1.15
SCNN1A-221ENST00000543768 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms