RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
PTPN6-222ENST00000543744 DENND4BO75064 1496 aaPredicted RBP25.29■■□□□ 1.64
PTPN6-222ENST00000543744 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
PTPN6-222ENST00000543744 HIRIP3Q9BW71 556 aaPredicted RBP25.28■■□□□ 1.64
PTPN6-222ENST00000543744 CFDP1Q9UEE9 299 aaPredicted RBP25.24■■□□□ 1.63
PTPN6-222ENST00000543744 KDM5BQ9UGL1 1544 aa25.24■■□□□ 1.63
PTPN6-222ENST00000543744 ADCY10Q96PN6 1610 aa25.22■■□□□ 1.63
PTPN6-222ENST00000543744 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
PTPN6-222ENST00000543744 CAMSAP2Q08AD1 1489 aa25.21■■□□□ 1.63
PTPN6-222ENST00000543744 GPATCH8Q9UKJ3 1502 aaKnown RBP25.21■■□□□ 1.63
PTPN6-222ENST00000543744 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.62
PTPN6-222ENST00000543744 KIF14Q15058 1648 aa25.19■■□□□ 1.62
PTPN6-222ENST00000543744 ABCA8O94911 1581 aa25.18■■□□□ 1.62
PTPN6-222ENST00000543744 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
PTPN6-222ENST00000543744 KCNH8Q96L42 1107 aa25.15■■□□□ 1.62
PTPN6-222ENST00000543744 ZNF777Q9ULD5 760 aaPredicted RBP25.14■■□□□ 1.62
PTPN6-222ENST00000543744 FOXD1Q16676 465 aa25.13■■□□□ 1.61
PTPN6-222ENST00000543744 ATP10BO94823 1461 aa25.12■■□□□ 1.61
PTPN6-222ENST00000543744 ANKRD30BQ9BXX2 1392 aa25.11■■□□□ 1.61
PTPN6-222ENST00000543744 NCOA1Q15788 1441 aa25.1■■□□□ 1.61
PTPN6-222ENST00000543744 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
PTPN6-222ENST00000543744 ANP32CO43423 234 aa25.09■■□□□ 1.61
PTPN6-222ENST00000543744 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
PTPN6-222ENST00000543744 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.61
PTPN6-222ENST00000543744 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
PTPN6-222ENST00000543744 RPRD2Q5VT52 1461 aaKnown RBP25.06■■□□□ 1.6
PTPN6-222ENST00000543744 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
PTPN6-222ENST00000543744 PTPRGP23470 1445 aa25.05■■□□□ 1.6
PTPN6-222ENST00000543744 CROCC2H7BZ55 1655 aa25.05■■□□□ 1.6
PTPN6-222ENST00000543744 ABCC10Q5T3U5 1492 aa25.05■■□□□ 1.6
PTPN6-222ENST00000543744 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
PTPN6-222ENST00000543744 HSPA5P11021 654 aaKnown RBP25.02■■□□□ 1.6
PTPN6-222ENST00000543744 CDC42BPAQ5VT25 1732 aa25.01■■□□□ 1.59
PTPN6-222ENST00000543744 PZPP20742 1482 aa25■■□□□ 1.59
PTPN6-222ENST00000543744 EIF4G2P78344 907 aaKnown RBP eCLIP25■■□□□ 1.59
PTPN6-222ENST00000543744 CHD1O14646 1710 aa24.96■■□□□ 1.59
PTPN6-222ENST00000543744 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
PTPN6-222ENST00000543744 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.59
PTPN6-222ENST00000543744 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.58
PTPN6-222ENST00000543744 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
PTPN6-222ENST00000543744 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
PTPN6-222ENST00000543744 KIAA1107Q9UPP5 1409 aa24.92■■□□□ 1.58
PTPN6-222ENST00000543744 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
PTPN6-222ENST00000543744 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
PTPN6-222ENST00000543744 NBPF8Q3BBV2 869 aa24.9■■□□□ 1.58
PTPN6-222ENST00000543744 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
PTPN6-222ENST00000543744 PKD2Q13563 968 aa24.88■■□□□ 1.57
PTPN6-222ENST00000543744 SUPT16HQ9Y5B9 1047 aaKnown RBP24.87■■□□□ 1.57
PTPN6-222ENST00000543744 ARHGEF5Q12774 1597 aa24.86■■□□□ 1.57
PTPN6-222ENST00000543744 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
PTPN6-222ENST00000543744 NUP155O75694 1391 aa24.83■■□□□ 1.57
PTPN6-222ENST00000543744 MBD5Q9P267 1494 aa24.83■■□□□ 1.57
PTPN6-222ENST00000543744 PREX2Q70Z35 1606 aa24.81■■□□□ 1.56
PTPN6-222ENST00000543744 KIF15Q9NS87 1388 aa24.81■■□□□ 1.56
PTPN6-222ENST00000543744 RSPH4AQ5TD94 716 aa24.79■■□□□ 1.56
PTPN6-222ENST00000543744 CCDC7Q96M83 1385 aa24.79■■□□□ 1.56
PTPN6-222ENST00000543744 SAMD9LQ8IVG5 1584 aa24.79■■□□□ 1.56
PTPN6-222ENST00000543744 CCDC141Q6ZP82 1450 aa24.79■■□□□ 1.56
PTPN6-222ENST00000543744 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
PTPN6-222ENST00000543744 CDC42BPBQ9Y5S2 1711 aa24.78■■□□□ 1.56
PTPN6-222ENST00000543744 KDM5DQ9BY66 1539 aa24.77■■□□□ 1.56
PTPN6-222ENST00000543744 SPATA31E1Q6ZUB1 1445 aa24.77■■□□□ 1.56
PTPN6-222ENST00000543744 C11orf95C9JLR9 678 aaPredicted RBP24.77■■□□□ 1.56
PTPN6-222ENST00000543744 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
PTPN6-222ENST00000543744 ERCC6L2Q5T890 1561 aa24.75■■□□□ 1.55
PTPN6-222ENST00000543744 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
PTPN6-222ENST00000543744 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
PTPN6-222ENST00000543744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
PTPN6-222ENST00000543744 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
PTPN6-222ENST00000543744 SYCP2Q9BX26 1530 aa24.68■■□□□ 1.54
PTPN6-222ENST00000543744 KIF7Q2M1P5 1343 aa24.68■■□□□ 1.54
PTPN6-222ENST00000543744 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
PTPN6-222ENST00000543744 UHRF1BP1Q6BDS2 1440 aa24.64■■□□□ 1.54
PTPN6-222ENST00000543744 PLEKHH2Q8IVE3 1493 aa24.64■■□□□ 1.53
PTPN6-222ENST00000543744 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
PTPN6-222ENST00000543744 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.53
PTPN6-222ENST00000543744 MAST1Q9Y2H9 1570 aa24.63■■□□□ 1.53
PTPN6-222ENST00000543744 USP47Q96K76 1375 aa24.63■■□□□ 1.53
PTPN6-222ENST00000543744 MYO5CQ9NQX4 1742 aa24.63■■□□□ 1.53
PTPN6-222ENST00000543744 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
PTPN6-222ENST00000543744 FAM135AQ9P2D6 1515 aa24.62■■□□□ 1.53
PTPN6-222ENST00000543744 UHRF1BP1LA0JNW5 1464 aa24.59■■□□□ 1.53
PTPN6-222ENST00000543744 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
PTPN6-222ENST00000543744 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.53
PTPN6-222ENST00000543744 FKBP8Q14318 412 aa24.57■■□□□ 1.52
PTPN6-222ENST00000543744 ZCCHC11Q5TAX3 1644 aaKnown RBP24.57■■□□□ 1.52
PTPN6-222ENST00000543744 KDM5CP41229 1560 aa24.56■■□□□ 1.52
PTPN6-222ENST00000543744 NEFLP07196 543 aa24.56■■□□□ 1.52
PTPN6-222ENST00000543744 PLCH2O75038 1416 aa24.55■■□□□ 1.52
PTPN6-222ENST00000543744 PLXNC1O60486 1568 aa24.55■■□□□ 1.52
PTPN6-222ENST00000543744 ARID4BQ4LE39 1312 aaPredicted RBP24.54■■□□□ 1.52
PTPN6-222ENST00000543744 UNC13BO14795 1591 aa24.54■■□□□ 1.52
PTPN6-222ENST00000543744 DCAF11Q8TEB1 546 aa24.53■■□□□ 1.52
PTPN6-222ENST00000543744 CARD11Q9BXL7 1154 aa24.53■■□□□ 1.52
PTPN6-222ENST00000543744 KDM2AQ9Y2K7 1162 aa24.53■■□□□ 1.52
PTPN6-222ENST00000543744 EFCAB2Q5VUJ9 269 aa24.52■■□□□ 1.52
PTPN6-222ENST00000543744 CCDC184Q52MB2 194 aa24.52■■□□□ 1.52
PTPN6-222ENST00000543744 BCORL1Q5H9F3 1711 aa24.51■■□□□ 1.51
PTPN6-222ENST00000543744 CCDC144AA2RUR9 1427 aa24.5■■□□□ 1.51
PTPN6-222ENST00000543744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms