RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 KDM5BQ9UGL1 1544 aa6.68□□□□□ -1.34
LMO3-229ENST00000543721 NEFMP07197 916 aa6.68□□□□□ -1.34
LMO3-229ENST00000543721 ABCA5Q8WWZ7 1642 aa6.68□□□□□ -1.34
LMO3-229ENST00000543721 MYCNP04198 464 aaPredicted RBP6.67□□□□□ -1.34
LMO3-229ENST00000543721 ATXN8OSP0DMR3 200 aa6.67□□□□□ -1.34
LMO3-229ENST00000543721 NAIPQ13075 1403 aa6.67□□□□□ -1.34
LMO3-229ENST00000543721 AKNAQ7Z591 1439 aa6.67□□□□□ -1.34
LMO3-229ENST00000543721 CFTRP13569 1480 aa6.66□□□□□ -1.34
LMO3-229ENST00000543721 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
LMO3-229ENST00000543721 POLR1AO95602 1720 aaPredicted RBP6.66□□□□□ -1.34
LMO3-229ENST00000543721 ARID4BQ4LE39 1312 aaPredicted RBP6.66□□□□□ -1.34
LMO3-229ENST00000543721 HECW1Q76N89 1606 aa6.66□□□□□ -1.34
LMO3-229ENST00000543721 MTUS2Q5JR59 1369 aa6.65□□□□□ -1.34
LMO3-229ENST00000543721 PABPN1Q86U42 306 aaKnown RBP eCLIP6.65□□□□□ -1.34
LMO3-229ENST00000543721 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.35
LMO3-229ENST00000543721 GSE1Q14687 1217 aa6.64□□□□□ -1.35
LMO3-229ENST00000543721 MYOM3Q5VTT5 1437 aa6.64□□□□□ -1.35
LMO3-229ENST00000543721 ATP1B4Q9UN42 357 aaPredicted RBP6.64□□□□□ -1.35
LMO3-229ENST00000543721 PRDM2Q13029 1718 aa6.64□□□□□ -1.35
LMO3-229ENST00000543721 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
LMO3-229ENST00000543721 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
LMO3-229ENST00000543721 MIA2Q96PC5 1412 aa6.63□□□□□ -1.35
LMO3-229ENST00000543721 ROCK2O75116 1388 aaKnown RBP6.63□□□□□ -1.35
LMO3-229ENST00000543721 KTN1Q86UP2 1357 aaKnown RBP6.63□□□□□ -1.35
LMO3-229ENST00000543721 PDE4AP27815 886 aa6.63□□□□□ -1.35
LMO3-229ENST00000543721 BACH2Q9BYV9 841 aa6.63□□□□□ -1.35
LMO3-229ENST00000543721 GCC2Q8IWJ2 1684 aa6.63□□□□□ -1.35
LMO3-229ENST00000543721 PDE3BQ13370 1112 aa6.62□□□□□ -1.35
LMO3-229ENST00000543721 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
LMO3-229ENST00000543721 SUPT6HQ7KZ85 1726 aaKnown RBP6.62□□□□□ -1.35
LMO3-229ENST00000543721 EHBP1L1Q8N3D4 1523 aa6.61□□□□□ -1.35
LMO3-229ENST00000543721 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
LMO3-229ENST00000543721 KIF7Q2M1P5 1343 aa6.61□□□□□ -1.35
LMO3-229ENST00000543721 PTPRKQ15262 1439 aa6.61□□□□□ -1.35
LMO3-229ENST00000543721 FHOD3Q2V2M9 1422 aa6.61□□□□□ -1.35
LMO3-229ENST00000543721 FAM43AQ8N2R8 423 aa6.61□□□□□ -1.35
LMO3-229ENST00000543721 TCOF1Q13428 1488 aaKnown RBP6.6□□□□□ -1.35
LMO3-229ENST00000543721 RRP1P56182 461 aaKnown RBP6.6□□□□□ -1.35
LMO3-229ENST00000543721 L3MBTL2Q969R5 705 aa6.6□□□□□ -1.35
LMO3-229ENST00000543721 ARXQ96QS3 562 aa6.6□□□□□ -1.35
LMO3-229ENST00000543721 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
LMO3-229ENST00000543721 SPATA31E1Q6ZUB1 1445 aa6.6□□□□□ -1.35
LMO3-229ENST00000543721 TMC1Q8TDI8 760 aa6.59□□□□□ -1.35
LMO3-229ENST00000543721 MPHOSPH9Q99550 1183 aa6.59□□□□□ -1.35
LMO3-229ENST00000543721 RPRD2Q5VT52 1461 aaKnown RBP6.59□□□□□ -1.35
LMO3-229ENST00000543721 CC2D2AQ9P2K1 1620 aa6.59□□□□□ -1.35
LMO3-229ENST00000543721 CUL7Q14999 1698 aa6.59□□□□□ -1.35
LMO3-229ENST00000543721 BRD4O60885 1362 aaPredicted RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 CTTNBP2Q8WZ74 1663 aa6.58□□□□□ -1.36
LMO3-229ENST00000543721 PNISRQ8TF01 805 aaKnown RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 ATF5Q9Y2D1 282 aaPredicted RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 SNAPC4Q5SXM2 1469 aa6.58□□□□□ -1.36
LMO3-229ENST00000543721 EIF5BO60841 1220 aaKnown RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 P3H3Q8IVL6 736 aa6.58□□□□□ -1.36
LMO3-229ENST00000543721 RCAN3Q9UKA8 241 aa6.58□□□□□ -1.36
LMO3-229ENST00000543721 DHX29Q7Z478 1369 aaKnown RBP6.58□□□□□ -1.36
LMO3-229ENST00000543721 RALBP1Q15311 655 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
LMO3-229ENST00000543721 UGGT2Q9NYU1 1516 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 INSRP06213 1382 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 NFKBIBQ15653 356 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 LRPPRCP42704 1394 aaKnown RBP6.57□□□□□ -1.36
LMO3-229ENST00000543721 KIF15Q9NS87 1388 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 ANKRD30BQ9BXX2 1392 aa6.57□□□□□ -1.36
LMO3-229ENST00000543721 KIF21AQ7Z4S6 1674 aa6.56□□□□□ -1.36
LMO3-229ENST00000543721 ARHGEF11O15085 1522 aa6.56□□□□□ -1.36
LMO3-229ENST00000543721 ROCK1Q13464 1354 aa6.56□□□□□ -1.36
LMO3-229ENST00000543721 TEX14Q8IWB6 1497 aa6.56□□□□□ -1.36
LMO3-229ENST00000543721 U3KPZ7 1027 aaPredicted RBP6.56□□□□□ -1.36
LMO3-229ENST00000543721 EXOC6Q8TAG9 804 aa6.55□□□□□ -1.36
LMO3-229ENST00000543721 BRPF3Q9ULD4 1205 aa6.55□□□□□ -1.36
LMO3-229ENST00000543721 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
LMO3-229ENST00000543721 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
LMO3-229ENST00000543721 L1TD1Q5T7N2 865 aaKnown RBP6.55□□□□□ -1.36
LMO3-229ENST00000543721 RRP7BPQ9NSQ0 103 aa6.55□□□□□ -1.36
LMO3-229ENST00000543721 ZMYM4Q5VZL5 1548 aa6.55□□□□□ -1.36
LMO3-229ENST00000543721 DENND4BO75064 1496 aaPredicted RBP6.55□□□□□ -1.36
LMO3-229ENST00000543721 FRAT1Q92837 279 aaPredicted RBP6.54□□□□□ -1.36
LMO3-229ENST00000543721 ABCA10Q8WWZ4 1543 aa6.54□□□□□ -1.36
LMO3-229ENST00000543721 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
LMO3-229ENST00000543721 SAMD9Q5K651 1589 aa6.54□□□□□ -1.36
LMO3-229ENST00000543721 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
LMO3-229ENST00000543721 PLEKHH2Q8IVE3 1493 aa6.53□□□□□ -1.36
LMO3-229ENST00000543721 USP47Q96K76 1375 aa6.53□□□□□ -1.36
LMO3-229ENST00000543721 FAM161AQ3B820 660 aa6.52□□□□□ -1.36
LMO3-229ENST00000543721 CENPQQ7L2Z9 268 aaPredicted RBP6.52□□□□□ -1.36
LMO3-229ENST00000543721 NLRP13Q86W25 1043 aa6.51□□□□□ -1.37
LMO3-229ENST00000543721 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.51□□□□□ -1.37
LMO3-229ENST00000543721 KIF14Q15058 1648 aa6.51□□□□□ -1.37
LMO3-229ENST00000543721 CHIC2Q9UKJ5 165 aa6.51□□□□□ -1.37
LMO3-229ENST00000543721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.5□□□□□ -1.37
LMO3-229ENST00000543721 DNMBPQ6XZF7 1577 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 MBD5Q9P267 1494 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 BECN1Q14457 450 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 PKNOX2Q96KN3 472 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 DCAF8L1A6NGE4 600 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 UHRF1BP1Q6BDS2 1440 aa6.5□□□□□ -1.37
LMO3-229ENST00000543721 KDM5CP41229 1560 aa6.49□□□□□ -1.37
LMO3-229ENST00000543721 RALGAPBQ86X10 1494 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms